8BXX
Crystal structure of formate dehydrogenase FDH2 enzyme from Granulicella mallensis MP5ACTX8 in complex with NAD and azide.
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A [auth AA] | SCOP2B Superfamily | D-2-hydroxyacid dehydrogenase-like | 8097858 | 3000044 | SCOP2B (2022-06-29) |
B [auth BB] | SCOP2B Superfamily | D-2-hydroxyacid dehydrogenase-like | 8097858 | 3000044 | SCOP2B (2022-06-29) |
C [auth CC] | SCOP2B Superfamily | D-2-hydroxyacid dehydrogenase-like | 8097858 | 3000044 | SCOP2B (2022-06-29) |
D [auth DD] | SCOP2B Superfamily | D-2-hydroxyacid dehydrogenase-like | 8097858 | 3000044 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth AA] | 2-Hacid_dh_C | e8bxxAA2 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NAD(P)-binding Rossmann-fold domains | F: 2-Hacid_dh_C | ECOD (1.6) |
A [auth AA] | 2-Hacid_dh | e8bxxAA1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: Formate/glycerate dehydrogenase catalytic domain-like | F: 2-Hacid_dh | ECOD (1.6) |
B [auth BB] | 2-Hacid_dh_C | e8bxxBB1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NAD(P)-binding Rossmann-fold domains | F: 2-Hacid_dh_C | ECOD (1.6) |
B [auth BB] | 2-Hacid_dh | e8bxxBB2 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: Formate/glycerate dehydrogenase catalytic domain-like | F: 2-Hacid_dh | ECOD (1.6) |
C [auth CC] | 2-Hacid_dh_C | e8bxxCC2 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NAD(P)-binding Rossmann-fold domains | F: 2-Hacid_dh_C | ECOD (1.6) |
C [auth CC] | 2-Hacid_dh | e8bxxCC1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: Formate/glycerate dehydrogenase catalytic domain-like | F: 2-Hacid_dh | ECOD (1.6) |
D [auth DD] | 2-Hacid_dh_C | e8bxxDD2 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: NAD(P)-binding Rossmann-fold domains | F: 2-Hacid_dh_C | ECOD (1.6) |
D [auth DD] | 2-Hacid_dh | e8bxxDD1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: Formate/glycerate dehydrogenase catalytic domain-like | F: 2-Hacid_dh | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth AA], B [auth BB], C [auth CC], D [auth DD] | PF02826 | D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain (2-Hacid_dh_C) | D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain | This domain is inserted into the catalytic domain, the large dehydrogenase and D-lactate dehydrogenase families in SCOP. N-terminal portion of which is represented by family Pfam:PF00389. | Domain |
A [auth AA], B [auth BB], C [auth CC], D [auth DD] | PF00389 | D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain (2-Hacid_dh) | D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain | This family represents the largest portion of the catalytic domain of 2-hydroxyacid dehydrogenases as the NAD binding domain is inserted within the structural domain. | Domain |