8BVH

Cryo-EM structure of the Hfq-Crc-amiE translation repression assembly.


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
A [auth w]SCOP2B SuperfamilySm-like ribonucleoproteins 8032703 3000419 SCOP2B (2022-06-29)
B [auth x]SCOP2B SuperfamilySm-like ribonucleoproteins 8032703 3000419 SCOP2B (2022-06-29)
CSCOP2B SuperfamilySm-like ribonucleoproteins 8032703 3000419 SCOP2B (2022-06-29)
DSCOP2B SuperfamilySm-like ribonucleoproteins 8032703 3000419 SCOP2B (2022-06-29)
ESCOP2B SuperfamilySm-like ribonucleoproteins 8032703 3000419 SCOP2B (2022-06-29)
FSCOP2B SuperfamilySm-like ribonucleoproteins 8032703 3000419 SCOP2B (2022-06-29)
G [auth R]SCOP2B SuperfamilySm-like ribonucleoproteins 8032703 3000419 SCOP2B (2022-06-29)
H [auth T]SCOP2B SuperfamilySm-like ribonucleoproteins 8032703 3000419 SCOP2B (2022-06-29)
I [auth J]SCOP2B SuperfamilySm-like ribonucleoproteins 8032703 3000419 SCOP2B (2022-06-29)
J [auth L]SCOP2B SuperfamilySm-like ribonucleoproteins 8032703 3000419 SCOP2B (2022-06-29)
K [auth N]SCOP2B SuperfamilySm-like ribonucleoproteins 8032703 3000419 SCOP2B (2022-06-29)
L [auth P]SCOP2B SuperfamilySm-like ribonucleoproteins 8032703 3000419 SCOP2B (2022-06-29)
N [auth S]SCOP2B SuperfamilySm-like ribonucleoproteins 8032703 3000419 SCOP2B (2022-06-29)
O [auth U]SCOP2B SuperfamilySm-like ribonucleoproteins 8032703 3000419 SCOP2B (2022-06-29)
P [auth K]SCOP2B SuperfamilySm-like ribonucleoproteins 8032703 3000419 SCOP2B (2022-06-29)
Q [auth M]SCOP2B SuperfamilySm-like ribonucleoproteins 8032703 3000419 SCOP2B (2022-06-29)
R [auth O]SCOP2B SuperfamilySm-like ribonucleoproteins 8032703 3000419 SCOP2B (2022-06-29)
S [auth Q]SCOP2B SuperfamilySm-like ribonucleoproteins 8032703 3000419 SCOP2B (2022-06-29)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF17209Hfq protein (Hfq)Hfq protein- Domain
M [auth H],
T [auth I],
V [auth B],
W [auth G]
PF03372Endonuclease/Exonuclease/phosphatase family (Exo_endo_phos)Endonuclease/Exonuclease/phosphatase familyThis large family of proteins includes magnesium dependent endonucleases and a large number of phosphatases involved in intracellular signalling [1]. This family includes: AP endonuclease proteins EC:4.2.99.18 e.g Swiss:P27695, DNase I proteins EC:3. ...This large family of proteins includes magnesium dependent endonucleases and a large number of phosphatases involved in intracellular signalling [1]. This family includes: AP endonuclease proteins EC:4.2.99.18 e.g Swiss:P27695, DNase I proteins EC:3.1.21.1 e.g. Swiss:P24855, Synaptojanin an inositol-1,4,5-trisphosphate phosphatase EC:3.1.3.56 Swiss:O43426, Sphingomyelinase EC:3.1.4.12 Swiss:P11889 and Nocturnin Swiss:O35710.
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
RNA-binding protein Hfq
M [auth H],
T [auth I],
V [auth B],
W [auth G]
Catabolite repression control protein -
U [auth A]amiE---