8BQS

Cryo-EM structure of the I-II-III2-IV2 respiratory supercomplex from Tetrahymena thermophila

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Protein Modification Annotation

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
O [auth AE]	SCOP2B Superfamily	HydB/Nqo4-like	8107320	3001849	SCOP2B (2022-06-29)
DA [auth AT]	SCOP2B Superfamily	Nqo6/HydA N-terminal domain-like	8107322	3002291	SCOP2B (2022-06-29)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A [auth A0]	PF02684	Lipid-A-disaccharide synthetase (LpxB)	Lipid-A-disaccharide synthetase	-	Family
HD [auth DD], HF [auth Dd]	PF01215	Cytochrome c oxidase subunit Vb (COX5B)	Cytochrome c oxidase subunit Vb	-	Domain
K [auth AA]	PF00361	Proton-conducting membrane transporter (Proton_antipo_M)	Proton-conducting membrane transporter	-	Family
SD [auth DP], SF [auth Dp]	PF02104	SURF1 family (SURF1)	SURF1 family	-	Family
VD [auth DS], VF [auth Ds]	PF00153	Mitochondrial carrier protein (Mito_carr)	Mitochondrial carrier protein	-	Repeat
XD [auth DU], XF [auth Du]	PF00153	Mitochondrial carrier protein (Mito_carr)	Mitochondrial carrier protein	-	Repeat
YD [auth DV], YF [auth Dv]	PF00153	Mitochondrial carrier protein (Mito_carr)	Mitochondrial carrier protein	-	Repeat
ZD [auth DW], ZF [auth Dw]	PF02104	SURF1 family (SURF1)	SURF1 family	-	Family
L [auth AB]	PF00384	Molybdopterin oxidoreductase (Molybdopterin)	Molybdopterin oxidoreductase	-	Family
L [auth AB]	PF22151	NADH-ubiquinone oxidoreductase NDSU1/NuoG-like, 4Fe-4S domain (NDSU1_4Fe-4S)	NADH-ubiquinone oxidoreductase NDSU1/NuoG-like, 4Fe-4S domain	This entry represents the 4Fe-4S domain of NADH-ubiquinone oxidoreductase NDUFS1 from mammals and NuoG from bacteria, which are part of respiratory chain complex I [1-5].	Domain
L [auth AB]	PF09326	NADH-ubiquinone oxidoreductase subunit G, C-terminal (NADH_dhqG_C)	NADH-ubiquinone oxidoreductase subunit G, C-terminal	-	Family
L [auth AB]	PF22117	NADH-quinone oxidoreductase subunit 3, ferredoxin-like domain (Nqo3_Fer4)	NADH-quinone oxidoreductase subunit 3, ferredoxin-like domain	NADH-quinone oxidoreductase subunit 3 (Nqo3) is a component of respiratory complex I. This protein is located at the peripheral arm of the complex and consists of multiple domains. This entry represents the second ferredoxin-like domain which contain ...	NADH-quinone oxidoreductase subunit 3 (Nqo3) is a component of respiratory complex I. This protein is located at the peripheral arm of the complex and consists of multiple domains. This entry represents the second ferredoxin-like domain which contains Fe4-S4 cluster, one of the redox centers of the complex [1-5].	Domain
L [auth AB]	PF10588	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region (NADH-G_4Fe-4S_3)	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region	-	Domain
M [auth AC]	PF00361	Proton-conducting membrane transporter (Proton_antipo_M)	Proton-conducting membrane transporter	-	Family
N [auth AD]	PF10531	SLBB domain (SLBB)	SLBB domain	-	Domain
N [auth AD]	PF22461	SLBB domain (SLBB_2)	SLBB domain	This entry represents a set of SLBB domains [5].	Domain
N [auth AD]	PF01512	Respiratory-chain NADH dehydrogenase 51 Kd subunit (Complex1_51K)	Respiratory-chain NADH dehydrogenase 51 Kd subunit	-	Family
N [auth AD]	PF10589	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region (NADH_4Fe-4S)	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region	-	Domain
DF [auth FA], DH [auth Fa]	PF02953	Tim10/DDP family zinc finger (zf-Tim10_DDP)	Tim10/DDP family zinc finger	Putative zinc binding domain with four conserved cysteine residues. This domain is found in the human disease protein Swiss:O60220. Members of this family such as Tim9 and Tim10 are involved in mitochondrial protein import [1]. Members of thi ...	Putative zinc binding domain with four conserved cysteine residues. This domain is found in the human disease protein Swiss:O60220. Members of this family such as Tim9 and Tim10 are involved in mitochondrial protein import [1]. Members of this family seem to be localised to the mitochondrial intermembrane space [2].	Domain
EH [auth Dl], FH [auth DL]	PF00415	Regulator of chromosome condensation (RCC1) repeat (RCC1)	Regulator of chromosome condensation (RCC1) repeat	-	Repeat
O [auth AE]	PF00346	Respiratory-chain NADH dehydrogenase, 49 Kd subunit (Complex1_49kDa)	Respiratory-chain NADH dehydrogenase, 49 Kd subunit	-	Family
P [auth AF]	PF00361	Proton-conducting membrane transporter (Proton_antipo_M)	Proton-conducting membrane transporter	-	Family
Q [auth AG]	PF00132	Bacterial transferase hexapeptide (six repeats) (Hexapep)	Bacterial transferase hexapeptide (six repeats)	-	Repeat
R [auth AH]	PF00146	NADH dehydrogenase (NADHdh)	NADH dehydrogenase	-	Family
S [auth AI]	PF01257	Thioredoxin-like [2Fe-2S] ferredoxin (2Fe-2S_thioredx)	Thioredoxin-like [2Fe-2S] ferredoxin	-	Family
B [auth A1]	PF01370	NAD dependent epimerase/dehydratase family (Epimerase)	NAD dependent epimerase/dehydratase family	-	Family
U [auth AK]	PF00132	Bacterial transferase hexapeptide (six repeats) (Hexapep)	Bacterial transferase hexapeptide (six repeats)	-	Repeat
V [auth AL]	PF12838	4Fe-4S dicluster domain (Fer4_7)	4Fe-4S dicluster domain	Superfamily includes proteins containing domains which bind to iron-sulfur clusters. Members include bacterial ferredoxins, various dehydrogenases, and various reductases. Structure of the domain is an alpha-antiparallel beta sandwich. Domain contai ...	Superfamily includes proteins containing domains which bind to iron-sulfur clusters. Members include bacterial ferredoxins, various dehydrogenases, and various reductases. Structure of the domain is an alpha-antiparallel beta sandwich. Domain contains two 4Fe4S clusters.	Domain
W [auth AM]	PF21711	Dynactin subunit 5 (DCTN5)	Dynactin subunit 5	-	Repeat
X [auth AN]	PF04716	ETC complex I subunit conserved region (ETC_C1_NDUFA5)	ETC complex I subunit conserved region	-	Family
Y [auth AO]	PF00329	Respiratory-chain NADH dehydrogenase, 30 Kd subunit (Complex1_30kDa)	Respiratory-chain NADH dehydrogenase, 30 Kd subunit	-	Family
Z [auth AP]	PF05071	NADH ubiquinone oxidoreductase subunit NDUFA12 (NDUFA12)	NADH ubiquinone oxidoreductase subunit NDUFA12	-	Family
BA [auth AR]	PF04800	NADH dehydrogenase ubiquinone Fe-S protein 4 (NDUS4)	NADH dehydrogenase ubiquinone Fe-S protein 4	-	Family
C [auth A2]	PF00226	DnaJ domain (DnaJ)	DnaJ domain	DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are conf ...	DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature [2].	Domain
DA [auth AT]	PF01058	NADH ubiquinone oxidoreductase, 20 Kd subunit (Oxidored_q6)	NADH ubiquinone oxidoreductase, 20 Kd subunit	-	Family
EA [auth AU]	PF10785	NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit (NADH-u_ox-rdase)	NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit	This family is the N-terminal domain of NADH-ubiquinone oxidoreductase 21 kDa subunits from fungi, lower metazoa and plants.	Domain
FA [auth AV]	PF00550	Phosphopantetheine attachment site (PP-binding)	Phosphopantetheine attachment site	A 4'-phosphopantetheine prosthetic group is attached through a serine. This prosthetic group acts as a a 'swinging arm' for the attachment of activated fatty acid and amino-acid groups. This domain forms a four helix bundle. This family includes memb ...	A 4'-phosphopantetheine prosthetic group is attached through a serine. This prosthetic group acts as a a 'swinging arm' for the attachment of activated fatty acid and amino-acid groups. This domain forms a four helix bundle. This family includes members not included in Prosite. The inclusion of these members is supported by sequence analysis and functional evidence. The related domain of Swiss:P19828 has the attachment serine replaced by an alanine.	Domain
GA [auth AW]	PF00550	Phosphopantetheine attachment site (PP-binding)	Phosphopantetheine attachment site	A 4'-phosphopantetheine prosthetic group is attached through a serine. This prosthetic group acts as a a 'swinging arm' for the attachment of activated fatty acid and amino-acid groups. This domain forms a four helix bundle. This family includes memb ...	A 4'-phosphopantetheine prosthetic group is attached through a serine. This prosthetic group acts as a a 'swinging arm' for the attachment of activated fatty acid and amino-acid groups. This domain forms a four helix bundle. This family includes members not included in Prosite. The inclusion of these members is supported by sequence analysis and functional evidence. The related domain of Swiss:P19828 has the attachment serine replaced by an alanine.	Domain
HA [auth AX]	PF00507	NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 (Oxidored_q4)	NADH-ubiquinone/plastoquinone oxidoreductase, chain 3	-	Family
JA [auth AZ]	PF05047	Mitochondrial ribosomal protein L51 / S25 / CI-B8 domain (L51_S25_CI-B8)	Mitochondrial ribosomal protein L51 / S25 / CI-B8 domain	The proteins in this family are located in the mitochondrion. The family includes ribosomal protein L51, and S25. This family also includes mitochondrial NADH-ubiquinone oxidoreductase B8 subunit (CI-B8) EC:1.6.5.3. It is not known whether all member ...	The proteins in this family are located in the mitochondrion. The family includes ribosomal protein L51, and S25. This family also includes mitochondrial NADH-ubiquinone oxidoreductase B8 subunit (CI-B8) EC:1.6.5.3. It is not known whether all members of this family form part of the NADH-ubiquinone oxidoreductase and whether they are also all ribosomal proteins. Structurally related to thioredoxin-fold.	Domain
D [auth A3]	PF00501	AMP-binding enzyme (AMP-binding)	AMP-binding enzyme	-	Family
YA [auth BH]	PF00361	Proton-conducting membrane transporter (Proton_antipo_M)	Proton-conducting membrane transporter	-	Family
ZA [auth BI]	PF00111	2Fe-2S iron-sulfur cluster binding domain (Fer2)	2Fe-2S iron-sulfur cluster binding domain	-	Domain
AB [auth BJ]	PF00085	Thioredoxin (Thioredoxin)	Thioredoxin	Thioredoxins are small enzymes that participate in redox reactions, via the reversible oxidation of an active centre disulfide bond. Some members with only the active site are not separated from the noise.	Domain
IB [auth BR]	PF10276	Zinc-finger domain (zf-CHCC)	Zinc-finger domain	This is a short zinc-finger domain conserved from fungi to humans. It is Cx8Hx14Cx2C.	Domain
UB [auth CA]	PF02910	Fumarate reductase flavoprotein C-term (Succ_DH_flav_C)	Fumarate reductase flavoprotein C-term	This family contains fumarate reductases, succinate dehydrogenases and L-aspartate oxidases.	Domain
UB [auth CA]	PF00890	FAD binding domain (FAD_binding_2)	FAD binding domain	-	Family
WB [auth CB]	PF13085	2Fe-2S iron-sulfur cluster binding domain (Fer2_3)	2Fe-2S iron-sulfur cluster binding domain	The 2Fe-2S ferredoxin family have a general core structure consisting of beta(2)-alpha-beta(2) which abeta-grasp type fold. The domain is around one hundred amino acids with four conserved cysteine residues to which the 2Fe-2S cluster is ligated.	Domain
WB [auth CB]	PF13534	4Fe-4S dicluster domain (Fer4_17)	4Fe-4S dicluster domain	This family includes proteins containing domains which bind to iron-sulfur clusters. Members include bacterial ferredoxins, various dehydrogenases, and various reductases. The structure of the domain is an alpha-antiparallel beta sandwich.	Domain
GC [auth A], SC [auth a]	PF05193	Peptidase M16 inactive domain (Peptidase_M16_C)	Peptidase M16 inactive domain	Peptidase M16 consists of two structurally related domains. One is the active peptidase, whereas the other is inactive. The two domains hold the substrate like a clamp [1].	Domain
GC [auth A], SC [auth a]	PF00675	Insulinase (Peptidase family M16) (Peptidase_M16)	Insulinase (Peptidase family M16)	-	Family
HC [auth B], TC [auth b]	PF05193	Peptidase M16 inactive domain (Peptidase_M16_C)	Peptidase M16 inactive domain	Peptidase M16 consists of two structurally related domains. One is the active peptidase, whereas the other is inactive. The two domains hold the substrate like a clamp [1].	Domain
IC [auth C], UC [auth c]	PF00033	Cytochrome b/b6/petB (Cytochrome_B)	Cytochrome b/b6/petB	-	Domain
JC [auth D], VC [auth d]	PF02167	Cytochrome C1 family (Cytochrom_C1)	Cytochrome C1 family	-	Family
KC [auth E], WC [auth e]	PF00355	Rieske [2Fe-2S] domain (Rieske)	Rieske [2Fe-2S] domain	The rieske domain has a [2Fe-2S] centre. Two conserved cysteines coordinate one Fe ion, while the other Fe ion is coordinated by two conserved histidines. In hyperthermophilic archaea there is a SKTPCX(2-3)C motif at the C-terminus. The cysteines in ...	The rieske domain has a [2Fe-2S] centre. Two conserved cysteines coordinate one Fe ion, while the other Fe ion is coordinated by two conserved histidines. In hyperthermophilic archaea there is a SKTPCX(2-3)C motif at the C-terminus. The cysteines in this motif form a disulphide bridge, which stabilises the protein [4].	Domain
LC [auth F], XC [auth f]	PF02320	Ubiquinol-cytochrome C reductase hinge protein (UCR_hinge)	Ubiquinol-cytochrome C reductase hinge protein	-	Family
ED [auth DA], EF [auth Da]	PF00115	Cytochrome C and Quinol oxidase polypeptide I (COX1)	Cytochrome C and Quinol oxidase polypeptide I	-	Family
FD [auth DB], FF [auth Db]	PF00116	Cytochrome C oxidase subunit II, periplasmic domain (COX2)	Cytochrome C oxidase subunit II, periplasmic domain	-	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth A0]	Lipid-A-disaccharide synthase	lipid-A-disaccharide synthase activity UDP-glycosyltransferase activity glycosyltransferase activity transferase activity hexosyltransferase activity catalytic activity binding phospholipid binding lipid binding	glycolipid metabolic process cellular biosynthetic process lipid A biosynthetic process carbohydrate derivative metabolic process lipid biosynthetic process phospholipid metabolic process phosphate-containing compound metabolic process lipooligosaccharide biosynthetic process phosphorus metabolic process carbohydrate derivative biosynthetic process membrane lipid metabolic process lipooligosaccharide metabolic process cellular metabolic process liposaccharide metabolic process glycolipid metabolic process cellular biosynthetic process lipid A biosynthetic process carbohydrate derivative metabolic process lipid biosynthetic process phospholipid metabolic process phosphate-containing compound metabolic process lipooligosaccharide biosynthetic process phosphorus metabolic process carbohydrate derivative biosynthetic process membrane lipid metabolic process lipooligosaccharide metabolic process cellular metabolic process liposaccharide metabolic process primary metabolic process glycolipid biosynthetic process phospholipid biosynthetic process lipid A metabolic process biosynthetic process organophosphate metabolic process organophosphate biosynthetic process cellular lipid metabolic process metabolic process cellular process membrane lipid biosynthetic process lipid metabolic process	-
J [auth A9]	Transmembrane protein, putative	-	-	membrane cellular anatomical entity
HD [auth DD], HF [auth Dd]	Cytochrome C oxidase subunit Vb protein	cation binding ion binding binding metal ion binding small molecule binding	aerobic respiration cellular respiration aerobic electron transport chain oxidative phosphorylation energy derivation by oxidation of organic compounds cellular metabolic process ATP synthesis coupled electron transport electron transport chain generation of precursor metabolites and energy mitochondrial electron transport, cytochrome c to oxygen respiratory electron transport chain metabolic process cellular process mitochondrial ATP synthesis coupled electron transport	-
ID [auth DE], IF [auth De]	Transmembrane protein, putative	-	-	membrane cellular anatomical entity
JD [auth DF], JF [auth Df]	Structural protein	-	-	-
KD [auth DG], KF [auth Dg]	Transmembrane protein, putative	-	-	membrane cellular anatomical entity
LD [auth DH], LF [auth Dh]	Transmembrane protein, putative	-	-	membrane cellular anatomical entity
MD [auth DI], MF [auth Di]	Transmembrane protein	-	-	-
ND [auth DJ], NF [auth Dj]	Transmembrane protein, putative	-	-	membrane cellular anatomical entity
OD [auth DK], OF [auth Dk]	CTF/NF-I domain-containing protein	transcription regulator activity DNA-binding transcription factor activity	-	membrane-bounded organelle intracellular organelle intracellular anatomical structure organelle nucleus intracellular membrane-bounded organelle cellular anatomical entity
PD [auth DM], PF [auth Dm]	Transmembrane protein, putative	-	-	membrane cellular anatomical entity
QD [auth DN], QF [auth Dn]	Ymf67	-	-	membrane-bounded organelle intracellular organelle intracellular anatomical structure mitochondrion organelle cytoplasm cellular anatomical entity intracellular membrane-bounded organelle membrane
K [auth AA]	NADH dehydrogenase subunit 5	monoatomic cation transmembrane transporter activity proton transmembrane transporter activity primary active transmembrane transporter activity oxidoreductase activity, acting on NAD(P)H oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor electron transfer activity active monoatomic ion transmembrane transporter activity oxidoreductase activity NADH dehydrogenase (ubiquinone) activity oxidoreduction-driven active transmembrane transporter activity active transmembrane transporter activity inorganic molecular entity transmembrane transporter activity inorganic cation transmembrane transporter activity monoatomic ion transmembrane transporter activity transporter activity monoatomic cation transmembrane transporter activity proton transmembrane transporter activity primary active transmembrane transporter activity oxidoreductase activity, acting on NAD(P)H oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor electron transfer activity active monoatomic ion transmembrane transporter activity oxidoreductase activity NADH dehydrogenase (ubiquinone) activity oxidoreduction-driven active transmembrane transporter activity active transmembrane transporter activity inorganic molecular entity transmembrane transporter activity inorganic cation transmembrane transporter activity monoatomic ion transmembrane transporter activity transporter activity transmembrane transporter activity catalytic activity	aerobic respiration cellular respiration oxidative phosphorylation energy derivation by oxidation of organic compounds cellular metabolic process ATP synthesis coupled electron transport electron transport chain generation of precursor metabolites and energy respiratory electron transport chain metabolic process cellular process electron transport coupled proton transport transport proton transmembrane transport aerobic respiration cellular respiration oxidative phosphorylation energy derivation by oxidation of organic compounds cellular metabolic process ATP synthesis coupled electron transport electron transport chain generation of precursor metabolites and energy respiratory electron transport chain metabolic process cellular process electron transport coupled proton transport transport proton transmembrane transport monoatomic ion transmembrane transport inorganic ion transmembrane transport establishment of localization inorganic cation transmembrane transport transmembrane transport monoatomic cation transmembrane transport localization energy coupled proton transmembrane transport, against electrochemical gradient monoatomic ion transport monoatomic cation transport	membrane-bounded organelle intracellular organelle intracellular anatomical structure plastid organelle cytoplasm cellular anatomical entity intracellular membrane-bounded organelle chloroplast
RD [auth DO], RF [auth Do]	Protein phosphatase 2C, putative	-	-	-
SD [auth DP], SF [auth Dp]	SURF1-like protein	-	respiratory chain complex IV assembly cytochrome complex assembly protein-containing complex organization mitochondrial respirasome assembly mitochondrial cytochrome c oxidase assembly cellular component organization cellular component biogenesis organelle organization cellular component assembly mitochondrial respiratory chain complex assembly protein-containing complex assembly cellular process cellular component organization or biogenesis mitochondrion organization respiratory chain complex IV assembly cytochrome complex assembly protein-containing complex organization mitochondrial respirasome assembly mitochondrial cytochrome c oxidase assembly cellular component organization cellular component biogenesis organelle organization cellular component assembly mitochondrial respiratory chain complex assembly protein-containing complex assembly cellular process cellular component organization or biogenesis mitochondrion organization Golgi organization endomembrane system organization	membrane-bounded organelle mitochondrial membrane intracellular anatomical structure organelle inner membrane mitochondrion membrane cellular anatomical entity intracellular membrane-bounded organelle mitochondrial inner membrane intracellular organelle organelle envelope mitochondrial envelope organelle cytoplasm membrane-bounded organelle mitochondrial membrane intracellular anatomical structure organelle inner membrane mitochondrion membrane cellular anatomical entity intracellular membrane-bounded organelle mitochondrial inner membrane intracellular organelle organelle envelope mitochondrial envelope organelle cytoplasm organelle membrane endoplasmic reticulum-Golgi intermediate compartment endoplasmic reticulum endomembrane system
TD [auth DQ], TF [auth Dq]	TraB family protein	-	-	-
UD [auth DR], UF [auth Dr]	Transmembrane protein, putative	-	-	membrane cellular anatomical entity
VD [auth DS], VF [auth Ds]	Oxoglutarate/malate translocator protein, putative	transporter activity transmembrane transporter activity	-	membrane cellular anatomical entity
WD [auth DT], WF [auth Dt]	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8, mitochondrial	-	-	-
XD [auth DU], XF [auth Du]	Carrier protein	-	-	membrane cellular anatomical entity
YD [auth DV], YF [auth Dv]	2-oxoglutarate/malate carrier protein	sulfate transmembrane transporter activity sulfur compound transmembrane transporter activity inorganic molecular entity transmembrane transporter activity transporter activity transmembrane transporter activity inorganic anion transmembrane transporter activity dicarboxylic acid transmembrane transporter activity oxaloacetate transmembrane transporter activity carboxylic acid transmembrane transporter activity organic acid transmembrane transporter activity organic anion transmembrane transporter activity C4-dicarboxylate transmembrane transporter activity malate transmembrane transporter activity thiosulfate transmembrane transporter activity sulfate transmembrane transporter activity sulfur compound transmembrane transporter activity inorganic molecular entity transmembrane transporter activity transporter activity transmembrane transporter activity inorganic anion transmembrane transporter activity dicarboxylic acid transmembrane transporter activity oxaloacetate transmembrane transporter activity carboxylic acid transmembrane transporter activity organic acid transmembrane transporter activity organic anion transmembrane transporter activity C4-dicarboxylate transmembrane transporter activity malate transmembrane transporter activity thiosulfate transmembrane transporter activity succinate transmembrane transporter activity antiporter activity active transmembrane transporter activity secondary active transmembrane transporter activity	transmembrane transport localization transport phosphate ion transmembrane transport phosphate ion transport cellular process inorganic ion transmembrane transport inorganic anion transmembrane transport establishment of localization inorganic anion transport	membrane cellular anatomical entity
ZD [auth DW], ZF [auth Dw]	SURF1-like protein	-	respiratory chain complex IV assembly cytochrome complex assembly protein-containing complex organization mitochondrial respirasome assembly mitochondrial cytochrome c oxidase assembly cellular component organization cellular component biogenesis organelle organization cellular component assembly mitochondrial respiratory chain complex assembly protein-containing complex assembly cellular process cellular component organization or biogenesis mitochondrion organization respiratory chain complex IV assembly cytochrome complex assembly protein-containing complex organization mitochondrial respirasome assembly mitochondrial cytochrome c oxidase assembly cellular component organization cellular component biogenesis organelle organization cellular component assembly mitochondrial respiratory chain complex assembly protein-containing complex assembly cellular process cellular component organization or biogenesis mitochondrion organization Golgi organization endomembrane system organization	membrane-bounded organelle mitochondrial membrane intracellular anatomical structure organelle inner membrane mitochondrion membrane cellular anatomical entity intracellular membrane-bounded organelle mitochondrial inner membrane intracellular organelle organelle envelope mitochondrial envelope organelle cytoplasm membrane-bounded organelle mitochondrial membrane intracellular anatomical structure organelle inner membrane mitochondrion membrane cellular anatomical entity intracellular membrane-bounded organelle mitochondrial inner membrane intracellular organelle organelle envelope mitochondrial envelope organelle cytoplasm organelle membrane endoplasmic reticulum-Golgi intermediate compartment endoplasmic reticulum endomembrane system
AE [auth DX], AG [auth Dx]	COXTT9	-	-	-
L [auth AB]	NADH-ubiquinone oxidoreductase 75 kDa subunit	monoatomic cation transmembrane transporter activity proton transmembrane transporter activity primary active transmembrane transporter activity oxidoreductase activity, acting on NAD(P)H oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor electron transfer activity active monoatomic ion transmembrane transporter activity oxidoreductase activity NADH dehydrogenase (ubiquinone) activity oxidoreduction-driven active transmembrane transporter activity active transmembrane transporter activity inorganic molecular entity transmembrane transporter activity inorganic cation transmembrane transporter activity monoatomic ion transmembrane transporter activity transporter activity monoatomic cation transmembrane transporter activity proton transmembrane transporter activity primary active transmembrane transporter activity oxidoreductase activity, acting on NAD(P)H oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor electron transfer activity active monoatomic ion transmembrane transporter activity oxidoreductase activity NADH dehydrogenase (ubiquinone) activity oxidoreduction-driven active transmembrane transporter activity active transmembrane transporter activity inorganic molecular entity transmembrane transporter activity inorganic cation transmembrane transporter activity monoatomic ion transmembrane transporter activity transporter activity transmembrane transporter activity catalytic activity iron-sulfur cluster binding binding 4 iron, 4 sulfur cluster binding metal cluster binding small molecule binding	aerobic respiration cellular respiration oxidative phosphorylation energy derivation by oxidation of organic compounds cellular metabolic process ATP synthesis coupled electron transport electron transport chain generation of precursor metabolites and energy respiratory electron transport chain metabolic process cellular process	membrane cellular anatomical entity
BE [auth DY], BG [auth Dy]	COXTT10	-	-	-
CE [auth DZ], CG [auth Dz]	39S ribosomal protein L9, mitochondrial	-	-	-
DE [auth EA], DG [auth Ea]	COXTT12,Transmembrane protein,Transmembrane protein	-	-	-
EE [auth EB], EG [auth Eb]	Transmembrane protein, putative	-	-	membrane cellular anatomical entity
FE [auth EC], FG [auth Ec]	COXTT27	-	-	-
GE [auth ED], GG [auth Ed]	Ymf75	-	-	membrane-bounded organelle intracellular organelle intracellular anatomical structure mitochondrion organelle cytoplasm cellular anatomical entity intracellular membrane-bounded organelle membrane
HE [auth EE], HG [auth Ee]	Mobilization protein	-	-	-
IE [auth EF], IG [auth Ef]	Iron-binding zinc finger CDGSH type protein	iron-sulfur cluster binding 2 iron, 2 sulfur cluster binding binding metal cluster binding small molecule binding cation binding ion binding metal ion binding	cellular biosynthetic process cellular metabolic process primary metabolic process protein maturation by [2Fe-2S] cluster transfer gene expression macromolecule biosynthetic process protein maturation biosynthetic process protein maturation by iron-sulfur cluster transfer metabolic process cellular process protein metabolic process macromolecule metabolic process	membrane-bounded organelle intracellular organelle intracellular anatomical structure mitochondrion organelle cytoplasm cellular anatomical entity intracellular membrane-bounded organelle membrane
JE [auth EG], JG [auth Eg]	COXTT28	-	-	-
KE [auth EH], KG [auth Eh]	Transmembrane protein, putative	-	-	membrane cellular anatomical entity
M [auth AC]	NADH-ubiquinone oxidoreductase chain 4	binding quinone binding ubiquinone binding small molecule binding monoatomic cation transmembrane transporter activity proton transmembrane transporter activity primary active transmembrane transporter activity oxidoreductase activity, acting on NAD(P)H oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor electron transfer activity active monoatomic ion transmembrane transporter activity oxidoreductase activity NADH dehydrogenase (ubiquinone) activity oxidoreduction-driven active transmembrane transporter activity binding quinone binding ubiquinone binding small molecule binding monoatomic cation transmembrane transporter activity proton transmembrane transporter activity primary active transmembrane transporter activity oxidoreductase activity, acting on NAD(P)H oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor electron transfer activity active monoatomic ion transmembrane transporter activity oxidoreductase activity NADH dehydrogenase (ubiquinone) activity oxidoreduction-driven active transmembrane transporter activity active transmembrane transporter activity inorganic molecular entity transmembrane transporter activity inorganic cation transmembrane transporter activity monoatomic ion transmembrane transporter activity transporter activity transmembrane transporter activity catalytic activity	aerobic respiration cellular respiration oxidative phosphorylation energy derivation by oxidation of organic compounds cellular metabolic process ATP synthesis coupled electron transport electron transport chain generation of precursor metabolites and energy respiratory electron transport chain metabolic process cellular process electron transport coupled proton transport transport proton transmembrane transport aerobic respiration cellular respiration oxidative phosphorylation energy derivation by oxidation of organic compounds cellular metabolic process ATP synthesis coupled electron transport electron transport chain generation of precursor metabolites and energy respiratory electron transport chain metabolic process cellular process electron transport coupled proton transport transport proton transmembrane transport monoatomic ion transmembrane transport inorganic ion transmembrane transport establishment of localization inorganic cation transmembrane transport transmembrane transport monoatomic cation transmembrane transport localization energy coupled proton transmembrane transport, against electrochemical gradient monoatomic ion transport monoatomic cation transport	membrane-bounded organelle mitochondrial membrane intracellular anatomical structure mitochondrion membrane cellular anatomical entity intracellular membrane-bounded organelle intracellular organelle organelle envelope mitochondrial envelope organelle cytoplasm organelle membrane
LE [auth EI], LG [auth Ei]	Transmembrane protein	-	-	-
ME [auth EV], MG [auth Ev]	Decapping nuclease	-	-	-
NE [auth EK], NG [auth Ek]	Complex III subunit VII	-	-	-
OE [auth EL], OG [auth El]	Transmembrane protein, putative	-	-	membrane cellular anatomical entity
PE [auth EM], PG [auth Em]	Transmembrane protein, putative	-	-	membrane cellular anatomical entity
QE [auth EN], QG [auth En]	COXTT22	-	-	-
RE [auth EO], RG [auth Eo]	Transmembrane protein, putative	-	-	-
SE [auth EP], SG [auth Ep]	Phage protein	-	-	-
TE [auth EQ], TG [auth Eq]	Transmembrane protein, putative	-	-	membrane cellular anatomical entity
UE [auth ER], UG [auth Er]	Lysozyme	-	-	-
N [auth AD]	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial	binding nucleotide binding FMN binding nucleoside phosphate binding ion binding organic cyclic compound binding anion binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding monoatomic cation transmembrane transporter activity proton transmembrane transporter activity primary active transmembrane transporter activity binding nucleotide binding FMN binding nucleoside phosphate binding ion binding organic cyclic compound binding anion binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding monoatomic cation transmembrane transporter activity proton transmembrane transporter activity primary active transmembrane transporter activity oxidoreductase activity, acting on NAD(P)H oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor electron transfer activity active monoatomic ion transmembrane transporter activity oxidoreductase activity NADH dehydrogenase (ubiquinone) activity oxidoreduction-driven active transmembrane transporter activity active transmembrane transporter activity inorganic molecular entity transmembrane transporter activity inorganic cation transmembrane transporter activity monoatomic ion transmembrane transporter activity transporter activity transmembrane transporter activity catalytic activity NAD binding purine nucleotide binding adenyl nucleotide binding iron-sulfur cluster binding 4 iron, 4 sulfur cluster binding metal cluster binding cation binding metal ion binding	aerobic respiration cellular respiration aerobic electron transport chain oxidative phosphorylation energy derivation by oxidation of organic compounds cellular metabolic process ATP synthesis coupled electron transport electron transport chain generation of precursor metabolites and energy mitochondrial electron transport, NADH to ubiquinone respiratory electron transport chain metabolic process cellular process mitochondrial ATP synthesis coupled electron transport	-
VE [auth ES], VG [auth Es]	Ymf70	-	-	membrane-bounded organelle intracellular organelle intracellular anatomical structure mitochondrion organelle cytoplasm cellular anatomical entity intracellular membrane-bounded organelle membrane
WE [auth ET], WG [auth Et]	Zf-Tim10_DDP domain-containing protein	-	-	-
XE [auth EU], XG [auth Eu]	ABC transporter	-	-	-
YE [auth EJ], YG [auth Ej]	YflT domain-containing protein	-	-	-
ZE [auth EW], ZG [auth Ew]	Cullin domain-containing protein	-	-	-
AF [auth EX], AH [auth Ex]	Zf-Tim10_DDP domain-containing protein	-	-	-
BF [auth EY], BH [auth Ey]	Annexin	-	-	-
CF [auth EZ], CH [auth Ez]	Transposase	-	-	-
DF [auth FA], DH [auth Fa]	Tim10/DDP family zinc finger protein	-	protein localization establishment of protein localization cellular localization nitrogen compound transport transport establishment of localization localization protein transport cellular macromolecule localization macromolecule localization cellular process	membrane-bounded organelle mitochondrial membrane intracellular anatomical structure organelle inner membrane mitochondrion membrane cellular anatomical entity intracellular membrane-bounded organelle mitochondrial inner membrane intracellular organelle organelle envelope mitochondrial envelope organelle cytoplasm membrane-bounded organelle mitochondrial membrane intracellular anatomical structure organelle inner membrane mitochondrion membrane cellular anatomical entity intracellular membrane-bounded organelle mitochondrial inner membrane intracellular organelle organelle envelope mitochondrial envelope organelle cytoplasm organelle membrane
EH [auth Dl], FH [auth DL]	Chromosome condensation regulator RCC1 repeat protein,Chromosome condensation regulator RCC1 repeat protein,Chromosome condensation regulator RCC1 repeat protein,chain 150	-	-	-
O [auth AE]	NADH dehydrogenase subunit 7	NAD binding binding nucleoside phosphate binding purine nucleotide binding organic cyclic compound binding adenyl nucleotide binding nucleotide binding heterocyclic compound binding small molecule binding oxidoreductase activity oxidoreductase activity, acting on NAD(P)H catalytic activity quinone binding	aerobic respiration cellular respiration aerobic electron transport chain oxidative phosphorylation energy derivation by oxidation of organic compounds cellular metabolic process ATP synthesis coupled electron transport electron transport chain generation of precursor metabolites and energy mitochondrial electron transport, NADH to ubiquinone respiratory electron transport chain metabolic process cellular process mitochondrial ATP synthesis coupled electron transport	chloroplast thylakoid membrane membrane-bounded organelle plastid membrane intracellular anatomical structure plastid organelle outer membrane plastid thylakoid membrane plastid thylakoid intracellular organelle organelle envelope bounding membrane of organelle thylakoid plastid envelope chloroplast chloroplast thylakoid membrane membrane-bounded organelle plastid membrane intracellular anatomical structure plastid organelle outer membrane plastid thylakoid membrane plastid thylakoid intracellular organelle organelle envelope bounding membrane of organelle thylakoid plastid envelope chloroplast non-membrane-bounded organelle membrane cellular anatomical entity intracellular membrane-bounded organelle thylakoid membrane organelle chloroplast thylakoid intracellular non-membrane-bounded organelle outer membrane cytoplasm photosynthetic membrane organelle membrane
P [auth AF]	Ymf65	-	-	membrane-bounded organelle intracellular organelle intracellular anatomical structure mitochondrion organelle cytoplasm cellular anatomical entity intracellular membrane-bounded organelle membrane
Q [auth AG]	Transcription factor apfi protein, putative	-	-	-
R [auth AH]	NADH-ubiquinone oxidoreductase chain 1	monoatomic cation transmembrane transporter activity proton transmembrane transporter activity primary active transmembrane transporter activity oxidoreductase activity, acting on NAD(P)H oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor electron transfer activity active monoatomic ion transmembrane transporter activity oxidoreductase activity NADH dehydrogenase (ubiquinone) activity oxidoreduction-driven active transmembrane transporter activity active transmembrane transporter activity inorganic molecular entity transmembrane transporter activity inorganic cation transmembrane transporter activity monoatomic ion transmembrane transporter activity transporter activity monoatomic cation transmembrane transporter activity proton transmembrane transporter activity primary active transmembrane transporter activity oxidoreductase activity, acting on NAD(P)H oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor electron transfer activity active monoatomic ion transmembrane transporter activity oxidoreductase activity NADH dehydrogenase (ubiquinone) activity oxidoreduction-driven active transmembrane transporter activity active transmembrane transporter activity inorganic molecular entity transmembrane transporter activity inorganic cation transmembrane transporter activity monoatomic ion transmembrane transporter activity transporter activity transmembrane transporter activity catalytic activity	aerobic respiration cellular respiration energy derivation by oxidation of organic compounds cellular metabolic process metabolic process cellular process generation of precursor metabolites and energy	-
S [auth AI]	NADH-ubiquinone oxidoreductase 24 kDa subunit	iron-sulfur cluster binding 2 iron, 2 sulfur cluster binding binding metal cluster binding small molecule binding oxidoreductase activity oxidoreductase activity, acting on NAD(P)H catalytic activity NADH dehydrogenase activity cation binding ion binding metal ion binding	aerobic respiration cellular respiration aerobic electron transport chain oxidative phosphorylation energy derivation by oxidation of organic compounds cellular metabolic process ATP synthesis coupled electron transport electron transport chain generation of precursor metabolites and energy mitochondrial electron transport, NADH to ubiquinone respiratory electron transport chain metabolic process cellular process mitochondrial ATP synthesis coupled electron transport	-
B [auth A1]	NAD-dependent epimerase/dehydratase family protein	protein-containing complex binding binding	ubiquinone-6 metabolic process small molecule biosynthetic process cellular biosynthetic process cellular metabolic process ubiquinone biosynthetic process quinone metabolic process cellular ketone metabolic process biosynthetic process quinone biosynthetic process small molecule metabolic process metabolic process cellular process ubiquinone metabolic process ketone biosynthetic process ubiquinone-6 metabolic process small molecule biosynthetic process cellular biosynthetic process cellular metabolic process ubiquinone biosynthetic process quinone metabolic process cellular ketone metabolic process biosynthetic process quinone biosynthetic process small molecule metabolic process metabolic process cellular process ubiquinone metabolic process ketone biosynthetic process ubiquinone-6 biosynthetic process	membrane-bounded organelle intracellular organelle intracellular anatomical structure mitochondrion organelle cytoplasm cellular anatomical entity intracellular membrane-bounded organelle
T [auth AJ]	Ymf62	-	-	membrane-bounded organelle intracellular organelle intracellular anatomical structure mitochondrion organelle cytoplasm cellular anatomical entity intracellular membrane-bounded organelle membrane
U [auth AK]	Gamma-carbonic anhydrase	-	-	-
V [auth AL]	NADH-ubiquinone oxidoreductase 1, chain, putative	iron-sulfur cluster binding binding 4 iron, 4 sulfur cluster binding metal cluster binding small molecule binding oxidoreductase activity oxidoreductase activity, acting on NAD(P)H catalytic activity NADH dehydrogenase activity	protein-containing complex organization mitochondrial respirasome assembly NADH dehydrogenase complex assembly cellular component organization cellular component biogenesis organelle organization cellular component assembly mitochondrial respiratory chain complex assembly protein-containing complex assembly cellular process cellular component organization or biogenesis mitochondrial respiratory chain complex I assembly mitochondrion organization aerobic respiration protein-containing complex organization mitochondrial respirasome assembly NADH dehydrogenase complex assembly cellular component organization cellular component biogenesis organelle organization cellular component assembly mitochondrial respiratory chain complex assembly protein-containing complex assembly cellular process cellular component organization or biogenesis mitochondrial respiratory chain complex I assembly mitochondrion organization aerobic respiration cellular respiration aerobic electron transport chain oxidative phosphorylation energy derivation by oxidation of organic compounds cellular metabolic process ATP synthesis coupled electron transport electron transport chain generation of precursor metabolites and energy mitochondrial electron transport, NADH to ubiquinone respiratory electron transport chain metabolic process mitochondrial ATP synthesis coupled electron transport	-
W [auth AM]	Gamma-carbonic anhydrase	-	-	-
X [auth AN]	ETC complex I subunit motif protein	-	cellular respiration energy derivation by oxidation of organic compounds respiratory electron transport chain cellular metabolic process electron transport chain metabolic process cellular process generation of precursor metabolites and energy	-
Y [auth AO]	NADH dehydrogenase subunit 9	monoatomic cation transmembrane transporter activity proton transmembrane transporter activity primary active transmembrane transporter activity oxidoreductase activity, acting on NAD(P)H oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor electron transfer activity active monoatomic ion transmembrane transporter activity oxidoreductase activity NADH dehydrogenase (ubiquinone) activity oxidoreduction-driven active transmembrane transporter activity active transmembrane transporter activity inorganic molecular entity transmembrane transporter activity inorganic cation transmembrane transporter activity monoatomic ion transmembrane transporter activity transporter activity monoatomic cation transmembrane transporter activity proton transmembrane transporter activity primary active transmembrane transporter activity oxidoreductase activity, acting on NAD(P)H oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor electron transfer activity active monoatomic ion transmembrane transporter activity oxidoreductase activity NADH dehydrogenase (ubiquinone) activity oxidoreduction-driven active transmembrane transporter activity active transmembrane transporter activity inorganic molecular entity transmembrane transporter activity inorganic cation transmembrane transporter activity monoatomic ion transmembrane transporter activity transporter activity transmembrane transporter activity catalytic activity	-	-
Z [auth AP]	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12	-	protein-containing complex organization mitochondrial respirasome assembly NADH dehydrogenase complex assembly cellular component organization cellular component biogenesis organelle organization cellular component assembly mitochondrial respiratory chain complex assembly protein-containing complex assembly cellular process cellular component organization or biogenesis mitochondrial respiratory chain complex I assembly mitochondrion organization response to oxidative stress protein-containing complex organization mitochondrial respirasome assembly NADH dehydrogenase complex assembly cellular component organization cellular component biogenesis organelle organization cellular component assembly mitochondrial respiratory chain complex assembly protein-containing complex assembly cellular process cellular component organization or biogenesis mitochondrial respiratory chain complex I assembly mitochondrion organization response to oxidative stress response to stimulus response to stress	-
AA [auth AQ]	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial	-	-	-
BA [auth AR]	NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial	-	cellular metabolic process electron transport chain metabolic process cellular process generation of precursor metabolites and energy	-
CA [auth AS]	NADH dehydrogenase, putative	-	response to oxidative stress response to stimulus response to stress	-
C [auth A2]	DnaJ domain protein	protein binding binding kinase binding enzyme binding protein kinase binding	cellular component organization organelle organization cellular process cellular component organization or biogenesis mitochondrion organization regulation of biological process regulation of cellular process negative regulation of programmed cell death regulation of apoptotic process biological regulation negative regulation of biological process regulation of programmed cell death cell death negative regulation of apoptotic process cellular component organization organelle organization cellular process cellular component organization or biogenesis mitochondrion organization regulation of biological process regulation of cellular process negative regulation of programmed cell death regulation of apoptotic process biological regulation negative regulation of biological process regulation of programmed cell death cell death negative regulation of apoptotic process negative regulation of cellular process apoptotic process programmed cell death	membrane-bounded organelle intracellular organelle intracellular anatomical structure mitochondrion organelle cytoplasm cellular anatomical entity intracellular membrane-bounded organelle
DA [auth AT]	NADH dehydrogenase subunit 10	iron-sulfur cluster binding binding 4 iron, 4 sulfur cluster binding metal cluster binding small molecule binding cation binding ion binding metal ion binding monoatomic cation transmembrane transporter activity proton transmembrane transporter activity primary active transmembrane transporter activity oxidoreductase activity, acting on NAD(P)H oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor electron transfer activity iron-sulfur cluster binding binding 4 iron, 4 sulfur cluster binding metal cluster binding small molecule binding cation binding ion binding metal ion binding monoatomic cation transmembrane transporter activity proton transmembrane transporter activity primary active transmembrane transporter activity oxidoreductase activity, acting on NAD(P)H oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor electron transfer activity active monoatomic ion transmembrane transporter activity oxidoreductase activity NADH dehydrogenase (ubiquinone) activity oxidoreduction-driven active transmembrane transporter activity active transmembrane transporter activity inorganic molecular entity transmembrane transporter activity inorganic cation transmembrane transporter activity monoatomic ion transmembrane transporter activity transporter activity transmembrane transporter activity catalytic activity quinone binding	electron transport coupled proton transport transport proton transmembrane transport monoatomic ion transmembrane transport inorganic ion transmembrane transport establishment of localization inorganic cation transmembrane transport transmembrane transport monoatomic cation transmembrane transport localization energy coupled proton transmembrane transport, against electrochemical gradient monoatomic ion transport cellular process monoatomic cation transport electron transport coupled proton transport transport proton transmembrane transport monoatomic ion transmembrane transport inorganic ion transmembrane transport establishment of localization inorganic cation transmembrane transport transmembrane transport monoatomic cation transmembrane transport localization energy coupled proton transmembrane transport, against electrochemical gradient monoatomic ion transport cellular process monoatomic cation transport protein-containing complex organization mitochondrial respirasome assembly NADH dehydrogenase complex assembly cellular component organization cellular component biogenesis organelle organization cellular component assembly mitochondrial respiratory chain complex assembly protein-containing complex assembly cellular component organization or biogenesis mitochondrial respiratory chain complex I assembly mitochondrion organization aerobic respiration cellular respiration energy derivation by oxidation of organic compounds cellular metabolic process metabolic process generation of precursor metabolites and energy	-
EA [auth AU]	NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit	-	-	membrane cellular anatomical entity
FA [auth AV]	Acyl carrier protein	phosphopantetheine-dependent carrier activity prosthetic group binding binding acyl carrier activity molecular carrier activity ACP phosphopantetheine attachment site binding acyl binding small molecule binding	-	-
GA [auth AW]	Acyl carrier protein	phosphopantetheine-dependent carrier activity prosthetic group binding binding acyl carrier activity molecular carrier activity ACP phosphopantetheine attachment site binding acyl binding small molecule binding	-	-
HA [auth AX]	NADH-ubiquinone oxidoreductase chain 3	monoatomic cation transmembrane transporter activity proton transmembrane transporter activity primary active transmembrane transporter activity oxidoreductase activity, acting on NAD(P)H oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor electron transfer activity active monoatomic ion transmembrane transporter activity oxidoreductase activity NADH dehydrogenase (ubiquinone) activity oxidoreduction-driven active transmembrane transporter activity active transmembrane transporter activity inorganic molecular entity transmembrane transporter activity inorganic cation transmembrane transporter activity monoatomic ion transmembrane transporter activity transporter activity monoatomic cation transmembrane transporter activity proton transmembrane transporter activity primary active transmembrane transporter activity oxidoreductase activity, acting on NAD(P)H oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor electron transfer activity active monoatomic ion transmembrane transporter activity oxidoreductase activity NADH dehydrogenase (ubiquinone) activity oxidoreduction-driven active transmembrane transporter activity active transmembrane transporter activity inorganic molecular entity transmembrane transporter activity inorganic cation transmembrane transporter activity monoatomic ion transmembrane transporter activity transporter activity transmembrane transporter activity catalytic activity	-	membrane-bounded organelle intracellular organelle intracellular anatomical structure plastid organelle cytoplasm cellular anatomical entity intracellular membrane-bounded organelle chloroplast
IA [auth AY]	Ymf58	-	-	membrane-bounded organelle intracellular organelle intracellular anatomical structure mitochondrion organelle cytoplasm cellular anatomical entity intracellular membrane-bounded organelle membrane
JA [auth AZ]	Ribosomal protein L51/S25/CI-B8 domain protein	-	-	intracellular organelle intracellular anatomical structure organelle intracellular non-membrane-bounded organelle ribosome cellular anatomical entity non-membrane-bounded organelle
KA [auth B0]	Transmembrane protein, putative	-	-	membrane cellular anatomical entity
LA [auth B1]	ATP synthase subunit e, mitochondrial	-	-	-
MA [auth B2]	GRAM domain protein	-	-	-
D [auth A3]	Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II	CoA-ligase activity fatty acid ligase activity ligase activity, forming carbon-sulfur bonds medium-chain fatty acid-CoA ligase activity fatty acid-CoA ligase activity catalytic activity acid-thiol ligase activity ligase activity ATP-dependent activity	fatty acid metabolic process oxoacid metabolic process cellular metabolic process carboxylic acid metabolic process primary metabolic process organic acid metabolic process cellular lipid metabolic process metabolic process cellular process small molecule metabolic process monocarboxylic acid metabolic process lipid metabolic process	-
NA [auth B3]	Transmembrane protein, putative	-	-	-
OA [auth B4]	Transmembrane protein, putative	-	-	membrane cellular anatomical entity
PA [auth B5]	Transmembrane protein, putative	-	-	membrane cellular anatomical entity
QA [auth B6]	NADH dehydrogenase subunit 1	-	-	-
RA [auth BA]	Transmembrane protein	-	-	-
SA [auth BB]	Transmembrane protein, putative	-	-	membrane cellular anatomical entity
TA [auth BC]	NDUB8	-	-	-
UA [auth BD]	Transmembrane protein, putative	-	-	membrane cellular anatomical entity
VA [auth BE]	NDUPH2	-	-	-
WA [auth BF]	NDUB10	-	-	-
E [auth A4]	RNase III domain-containing protein	-	-	-
XA [auth BG]	NDUA13	-	-	-
YA [auth BH]	NADH dehydrogenase subunit 2	oxidoreductase activity catalytic activity	-	membrane-bounded organelle intracellular organelle intracellular anatomical structure mitochondrion organelle cytoplasm cellular anatomical entity intracellular membrane-bounded organelle membrane
ZA [auth BI]	2 iron, 2 sulfur cluster-binding protein	iron-sulfur cluster binding 2 iron, 2 sulfur cluster binding binding metal cluster binding small molecule binding	P450-containing electron transport chain cellular metabolic process electron transport chain metabolic process cellular process generation of precursor metabolites and energy	intracellular anatomical structure cytoplasm cellular anatomical entity cytosol
AB [auth BJ]	Thioredoxin	-	-	-
BB [auth BK]	COX assembly mitochondrial protein	-	-	-
CB [auth BL]	Transmembrane protein, putative	-	-	membrane cellular anatomical entity
DB [auth BM]	Transmembrane protein, putative	-	-	membrane cellular anatomical entity
EB [auth BN]	PH domain-containing protein	-	-	-
FB [auth BO]	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8	-	-	-
GB [auth BP]	NDUB6	-	-	-
F [auth A5]	37S ribosomal protein S25, mitochondrial	-	-	-
HB [auth BQ]	NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4	-	-	-
IB [auth BR]	Zinc-finger protein	-	aerobic respiration cellular respiration aerobic electron transport chain oxidative phosphorylation energy derivation by oxidation of organic compounds cellular metabolic process ATP synthesis coupled electron transport electron transport chain generation of precursor metabolites and energy mitochondrial electron transport, NADH to ubiquinone respiratory electron transport chain metabolic process cellular process mitochondrial ATP synthesis coupled electron transport	-
JB [auth BS]	NDUB4	-	-	-
KB [auth BT]	NDUTT10	-	-	-
LB [auth BU]	NDUTT11	-	-	-
MB [auth BV]	NDUTT12	-	-	-
NB [auth BW]	CHCH domain-containing protein	-	-	-
OB [auth BX]	Transmembrane protein, putative	-	-	membrane cellular anatomical entity
PB [auth BY]	Ymf57	-	-	membrane-bounded organelle intracellular organelle intracellular anatomical structure mitochondrion organelle cytoplasm cellular anatomical entity intracellular membrane-bounded organelle membrane
QB [auth BZ]	Complex I-MNLL	-	-	-
G [auth A6]	Transmembrane protein, putative	-	-	membrane cellular anatomical entity
RB [auth CH]	Diphthamide synthesis protein	-	-	-
SB [auth CM]	Transmembrane protein, putative	-	-	membrane cellular anatomical entity
TB [auth CL]	Transposase	-	-	-
UB [auth CA]	Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial	flavin adenine dinucleotide binding binding nucleoside phosphate binding ion binding organic cyclic compound binding anion binding nucleotide binding heterocyclic compound binding small molecule binding oxidoreductase activity succinate dehydrogenase activity oxidoreductase activity, acting on the CH-CH group of donors oxidoreductase activity, acting on the CH-CH group of donors, quinone or related compound as acceptor catalytic activity flavin adenine dinucleotide binding binding nucleoside phosphate binding ion binding organic cyclic compound binding anion binding nucleotide binding heterocyclic compound binding small molecule binding oxidoreductase activity succinate dehydrogenase activity oxidoreductase activity, acting on the CH-CH group of donors oxidoreductase activity, acting on the CH-CH group of donors, quinone or related compound as acceptor catalytic activity succinate dehydrogenase (quinone) activity electron transfer activity	aerobic respiration cellular respiration tricarboxylic acid cycle energy derivation by oxidation of organic compounds cellular metabolic process metabolic process cellular process primary metabolic process generation of precursor metabolites and energy mitochondrial electron transport, succinate to ubiquinone aerobic electron transport chain oxidative phosphorylation ATP synthesis coupled electron transport electron transport chain aerobic respiration cellular respiration tricarboxylic acid cycle energy derivation by oxidation of organic compounds cellular metabolic process metabolic process cellular process primary metabolic process generation of precursor metabolites and energy mitochondrial electron transport, succinate to ubiquinone aerobic electron transport chain oxidative phosphorylation ATP synthesis coupled electron transport electron transport chain respiratory electron transport chain mitochondrial ATP synthesis coupled electron transport anaerobic respiration	cell periphery plasma membrane membrane cellular anatomical entity
VB [auth CI]	DUF4885 domain-containing protein	-	-	-
WB [auth CB]	succinate dehydrogenase	iron-sulfur cluster binding 2 iron, 2 sulfur cluster binding binding metal cluster binding small molecule binding 3 iron, 4 sulfur cluster binding oxidoreductase activity succinate dehydrogenase activity oxidoreductase activity, acting on the CH-CH group of donors oxidoreductase activity, acting on the CH-CH group of donors, quinone or related compound as acceptor catalytic activity succinate dehydrogenase (quinone) activity 4 iron, 4 sulfur cluster binding electron transfer activity	aerobic respiration cellular respiration tricarboxylic acid cycle energy derivation by oxidation of organic compounds cellular metabolic process metabolic process cellular process primary metabolic process generation of precursor metabolites and energy respiratory electron transport chain electron transport chain	membrane-bounded organelle mitochondrial membrane intracellular anatomical structure organelle inner membrane mitochondrion membrane cellular anatomical entity intracellular membrane-bounded organelle mitochondrial inner membrane intracellular organelle organelle envelope mitochondrial envelope organelle cytoplasm membrane-bounded organelle mitochondrial membrane intracellular anatomical structure organelle inner membrane mitochondrion membrane cellular anatomical entity intracellular membrane-bounded organelle mitochondrial inner membrane intracellular organelle organelle envelope mitochondrial envelope organelle cytoplasm organelle membrane cell periphery plasma membrane
XB [auth CF]	Transmembrane protein, putative	-	-	membrane cellular anatomical entity
YB [auth CG]	Uncharacterized protein	-	-	-
ZB [auth CK]	Transmembrane protein, putative	-	-	membrane cellular anatomical entity
AC [auth CE]	NmrA domain-containing protein	-	-	-
H [auth A7]	CX9C domain-containing protein	-	-	-
BC [auth CJ]	Transmembrane protein, putative	-	-	membrane cellular anatomical entity
CC [auth CN]	Transmembrane protein, putative	-	-	membrane cellular anatomical entity
DC [auth CC]	Transmembrane protein	-	-	-
EC [auth CO]	SDHTT11	-	-	-
FC [auth CD]	succinate dehydrogenase complex iron-sulfur subunit D	-	-	-
GC [auth A], SC [auth a]	Peptidase M16 inactive domain protein	cation binding ion binding binding metal ion binding small molecule binding peptidase activity catalytic activity, acting on a protein metalloendopeptidase activity hydrolase activity metallopeptidase activity catalytic activity endopeptidase activity	protein localization establishment of protein localization cellular localization cellular biosynthetic process protein targeting protein processing involved in protein targeting to mitochondrion protein maturation localization proteolysis cellular macromolecule localization protein metabolic process cellular metabolic process primary metabolic process gene expression protein localization establishment of protein localization cellular localization cellular biosynthetic process protein targeting protein processing involved in protein targeting to mitochondrion protein maturation localization proteolysis cellular macromolecule localization protein metabolic process cellular metabolic process primary metabolic process gene expression establishment of localization macromolecule biosynthetic process establishment of protein localization to organelle mitochondrial protein processing biosynthetic process macromolecule localization protein localization to organelle protein localization to mitochondrion protein targeting to mitochondrion protein processing cellular process metabolic process macromolecule metabolic process establishment of protein localization to mitochondrion	membrane-bounded organelle intracellular organelle intracellular anatomical structure mitochondrion organelle cytoplasm cellular anatomical entity intracellular membrane-bounded organelle
HC [auth B], TC [auth b]	M16 family peptidase, putative	cation binding ion binding binding metal ion binding small molecule binding peptidase activity catalytic activity, acting on a protein metalloendopeptidase activity hydrolase activity metallopeptidase activity catalytic activity endopeptidase activity	protein localization establishment of protein localization cellular localization cellular biosynthetic process protein targeting protein processing involved in protein targeting to mitochondrion protein maturation localization proteolysis cellular macromolecule localization protein metabolic process cellular metabolic process primary metabolic process gene expression protein localization establishment of protein localization cellular localization cellular biosynthetic process protein targeting protein processing involved in protein targeting to mitochondrion protein maturation localization proteolysis cellular macromolecule localization protein metabolic process cellular metabolic process primary metabolic process gene expression establishment of localization macromolecule biosynthetic process establishment of protein localization to organelle mitochondrial protein processing biosynthetic process macromolecule localization protein localization to organelle protein localization to mitochondrion protein targeting to mitochondrion protein processing cellular process metabolic process macromolecule metabolic process establishment of protein localization to mitochondrion	membrane-bounded organelle intracellular organelle intracellular anatomical structure mitochondrion organelle cytoplasm cellular anatomical entity intracellular membrane-bounded organelle
IC [auth C], UC [auth c]	Apocytochrome b	monoatomic cation transmembrane transporter activity proton transmembrane transporter activity oxidoreductase activity, acting on diphenols and related substances as donors primary active transmembrane transporter activity oxidoreductase activity electron transfer activity active monoatomic ion transmembrane transporter activity oxidoreduction-driven active transmembrane transporter activity active transmembrane transporter activity inorganic molecular entity transmembrane transporter activity inorganic cation transmembrane transporter activity monoatomic ion transmembrane transporter activity transporter activity ubiquinol-cytochrome-c reductase activity catalytic activity monoatomic cation transmembrane transporter activity proton transmembrane transporter activity oxidoreductase activity, acting on diphenols and related substances as donors primary active transmembrane transporter activity oxidoreductase activity electron transfer activity active monoatomic ion transmembrane transporter activity oxidoreduction-driven active transmembrane transporter activity active transmembrane transporter activity inorganic molecular entity transmembrane transporter activity inorganic cation transmembrane transporter activity monoatomic ion transmembrane transporter activity transporter activity ubiquinol-cytochrome-c reductase activity catalytic activity transmembrane transporter activity	aerobic respiration cellular respiration aerobic electron transport chain oxidative phosphorylation energy derivation by oxidation of organic compounds cellular metabolic process ATP synthesis coupled electron transport electron transport chain generation of precursor metabolites and energy mitochondrial electron transport, ubiquinol to cytochrome c respiratory electron transport chain metabolic process cellular process mitochondrial ATP synthesis coupled electron transport	-
JC [auth D], VC [auth d]	Cytochrome protein c1	binding organic cyclic compound binding tetrapyrrole binding heme binding electron transfer activity cation binding ion binding metal ion binding small molecule binding	aerobic respiration cellular respiration aerobic electron transport chain oxidative phosphorylation energy derivation by oxidation of organic compounds cellular metabolic process ATP synthesis coupled electron transport electron transport chain generation of precursor metabolites and energy mitochondrial electron transport, ubiquinol to cytochrome c respiratory electron transport chain metabolic process cellular process mitochondrial ATP synthesis coupled electron transport	-
KC [auth E], WC [auth e]	Rieske iron-sulfur protein, ubiquinol-cytochrome C reductase iron-sulfur subunit	oxidoreductase activity catalytic activity iron-sulfur cluster binding 2 iron, 2 sulfur cluster binding binding metal cluster binding small molecule binding cation binding ion binding metal ion binding	aerobic respiration cellular respiration aerobic electron transport chain oxidative phosphorylation energy derivation by oxidation of organic compounds cellular metabolic process ATP synthesis coupled electron transport electron transport chain generation of precursor metabolites and energy mitochondrial electron transport, ubiquinol to cytochrome c respiratory electron transport chain metabolic process cellular process mitochondrial ATP synthesis coupled electron transport	cell periphery plasma membrane membrane cellular anatomical entity
I [auth A8]	ND5a	-	-	-
LC [auth F], XC [auth f]	Ubiquinol-cytochrome C reductase hinge protein	-	-	membrane-bounded organelle mitochondrial membrane intracellular anatomical structure organelle inner membrane mitochondrion membrane cellular anatomical entity intracellular membrane-bounded organelle mitochondrial inner membrane intracellular organelle organelle envelope mitochondrial envelope organelle cytoplasm membrane-bounded organelle mitochondrial membrane intracellular anatomical structure organelle inner membrane mitochondrion membrane cellular anatomical entity intracellular membrane-bounded organelle mitochondrial inner membrane intracellular organelle organelle envelope mitochondrial envelope organelle cytoplasm organelle membrane
MC [auth G], YC [auth g]	UQCRTT1	-	-	-
NC [auth H], ZC [auth h]	Transmembrane protein, putative	-	-	-
AD [auth i], OC [auth I]	Transmembrane protein, putative	-	-	membrane cellular anatomical entity
DD [auth j], PC [auth J]	UQCRTT3	-	-	-
BD [auth k], QC [auth K]	Transmembrane protein, putative	-	-	membrane cellular anatomical entity
CD [auth l], RC [auth L]	UQCRTT2	-	-	-
ED [auth DA], EF [auth Da]	Cytochrome c oxidase subunit 1	monoatomic cation transmembrane transporter activity proton transmembrane transporter activity primary active transmembrane transporter activity cytochrome-c oxidase activity electron transfer activity active monoatomic ion transmembrane transporter activity oxidoreductase activity oxidoreduction-driven active transmembrane transporter activity active transmembrane transporter activity inorganic molecular entity transmembrane transporter activity oxidoreductase activity, acting on a heme group of donors inorganic cation transmembrane transporter activity monoatomic ion transmembrane transporter activity transporter activity transmembrane transporter activity monoatomic cation transmembrane transporter activity proton transmembrane transporter activity primary active transmembrane transporter activity cytochrome-c oxidase activity electron transfer activity active monoatomic ion transmembrane transporter activity oxidoreductase activity oxidoreduction-driven active transmembrane transporter activity active transmembrane transporter activity inorganic molecular entity transmembrane transporter activity oxidoreductase activity, acting on a heme group of donors inorganic cation transmembrane transporter activity monoatomic ion transmembrane transporter activity transporter activity transmembrane transporter activity catalytic activity binding organic cyclic compound binding tetrapyrrole binding heme binding cation binding ion binding metal ion binding small molecule binding	aerobic respiration cellular respiration aerobic electron transport chain oxidative phosphorylation energy derivation by oxidation of organic compounds cellular metabolic process ATP synthesis coupled electron transport electron transport chain generation of precursor metabolites and energy mitochondrial electron transport, cytochrome c to oxygen respiratory electron transport chain metabolic process cellular process mitochondrial ATP synthesis coupled electron transport aerobic respiration cellular respiration aerobic electron transport chain oxidative phosphorylation energy derivation by oxidation of organic compounds cellular metabolic process ATP synthesis coupled electron transport electron transport chain generation of precursor metabolites and energy mitochondrial electron transport, cytochrome c to oxygen respiratory electron transport chain metabolic process cellular process mitochondrial ATP synthesis coupled electron transport electron transport coupled proton transport transport proton transmembrane transport monoatomic ion transmembrane transport inorganic ion transmembrane transport establishment of localization inorganic cation transmembrane transport transmembrane transport monoatomic cation transmembrane transport localization energy coupled proton transmembrane transport, against electrochemical gradient monoatomic ion transport monoatomic cation transport	-
FD [auth DB], FF [auth Db]	Cytochrome c oxidase subunit 2	cation binding transition metal ion binding copper ion binding ion binding binding metal ion binding small molecule binding monoatomic cation transmembrane transporter activity proton transmembrane transporter activity primary active transmembrane transporter activity cytochrome-c oxidase activity electron transfer activity active monoatomic ion transmembrane transporter activity oxidoreductase activity cation binding transition metal ion binding copper ion binding ion binding binding metal ion binding small molecule binding monoatomic cation transmembrane transporter activity proton transmembrane transporter activity primary active transmembrane transporter activity cytochrome-c oxidase activity electron transfer activity active monoatomic ion transmembrane transporter activity oxidoreductase activity oxidoreduction-driven active transmembrane transporter activity active transmembrane transporter activity inorganic molecular entity transmembrane transporter activity oxidoreductase activity, acting on a heme group of donors inorganic cation transmembrane transporter activity monoatomic ion transmembrane transporter activity transporter activity transmembrane transporter activity catalytic activity	aerobic respiration cellular respiration oxidative phosphorylation energy derivation by oxidation of organic compounds cellular metabolic process ATP synthesis coupled electron transport electron transport chain generation of precursor metabolites and energy respiratory electron transport chain metabolic process cellular process	membrane-bounded organelle intracellular organelle intracellular anatomical structure mitochondrion organelle cytoplasm cellular anatomical entity intracellular membrane-bounded organelle membrane
GD [auth DC], GF [auth Dc]	Ymf68	-	-	membrane-bounded organelle intracellular organelle intracellular anatomical structure mitochondrion organelle cytoplasm cellular anatomical entity intracellular membrane-bounded organelle membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth A0]	IPR003835	Glycosyl transferase, family 19	Family
HD [auth DD], HF [auth Dd]	IPR002124	Cytochrome c oxidase, subunit Vb	Family
HD [auth DD], HF [auth Dd]	IPR036972	Cytochrome c oxidase, subunit Vb superfamily	Homologous Superfamily
OD [auth DK], OF [auth Dk]	IPR020604	CTF transcription factor/nuclear factor 1, DNA-binding domain	Domain
OD [auth DK], OF [auth Dk]	IPR011990	Tetratricopeptide-like helical domain superfamily	Homologous Superfamily
K [auth AA]	IPR003945	NADH-quinone oxidoreductase, chain 5-like	Family
K [auth AA]	IPR001750	NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit	Domain
SD [auth DP], SF [auth Dp]	IPR002994	Surfeit locus 1/Shy1	Family
SD [auth DP], SF [auth Dp]	IPR045214	Surfeit locus 1/4	Family
TD [auth DQ], TF [auth Dq]	IPR046345	TraB/PryY-like	Family
VD [auth DS], VF [auth Ds]	IPR018108	Mitochondrial substrate/solute carrier	Repeat
VD [auth DS], VF [auth Ds]	IPR023395	Mitochondrial carrier domain superfamily	Homologous Superfamily
VD [auth DS], VF [auth Ds]	IPR050391	Mitochondrial Metabolite Transporter	Family
XD [auth DU], XF [auth Du]	IPR018108	Mitochondrial substrate/solute carrier	Repeat
XD [auth DU], XF [auth Du]	IPR023395	Mitochondrial carrier domain superfamily	Homologous Superfamily
YD [auth DV], YF [auth Dv]	IPR018108	Mitochondrial substrate/solute carrier	Repeat
YD [auth DV], YF [auth Dv]	IPR023395	Mitochondrial carrier domain superfamily	Homologous Superfamily
YD [auth DV], YF [auth Dv]	IPR050391	Mitochondrial Metabolite Transporter	Family
ZD [auth DW], ZF [auth Dw]	IPR002994	Surfeit locus 1/Shy1	Family
ZD [auth DW], ZF [auth Dw]	IPR045214	Surfeit locus 1/4	Family
L [auth AB]	IPR006963	Molybdopterin oxidoreductase, 4Fe-4S domain	Domain
L [auth AB]	IPR015405	NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial-like	Domain
L [auth AB]	IPR006656	Molybdopterin oxidoreductase	Domain
L [auth AB]	IPR036010	2Fe-2S ferredoxin-like superfamily	Homologous Superfamily
L [auth AB]	IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	Domain
L [auth AB]	IPR000283	NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site	Conserved Site
L [auth AB]	IPR010228	NADH:ubiquinone oxidoreductase, subunit G	Family
L [auth AB]	IPR050123	Prokaryotic molybdopterin-containing oxidoreductase	Family
L [auth AB]	IPR019574	NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding	Domain
IE [auth EF], IG [auth Ef]	IPR018967	Iron-binding zinc finger, CDGSH type	Domain
IE [auth EF], IG [auth Ef]	IPR042216	MitoNEET, CDGSH iron-sulfur domain	Homologous Superfamily
IE [auth EF], IG [auth Ef]	IPR052950	CDGSH iron-sulfur domain-containing protein	Family
M [auth AC]	IPR003918	NADH:ubiquinone oxidoreductase	Family
M [auth AC]	IPR001750	NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit	Domain
N [auth AD]	IPR019575	NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain	Domain
N [auth AD]	IPR019554	Soluble ligand binding domain	Domain
N [auth AD]	IPR011537	NADH ubiquinone oxidoreductase, F subunit	Family
N [auth AD]	IPR001949	NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site	Conserved Site
N [auth AD]	IPR037225	NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily	Homologous Superfamily
N [auth AD]	IPR037207	NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily	Homologous Superfamily
N [auth AD]	IPR011538	NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain	Domain
N [auth AD]	IPR050837	Complex I 51 kDa subunit	Family
WE [auth ET], WG [auth Et]	IPR035427	Tim10-like domain superfamily	Homologous Superfamily
AF [auth EX], AH [auth Ex]	IPR035427	Tim10-like domain superfamily	Homologous Superfamily
DF [auth FA], DH [auth Fa]	IPR004217	Tim10-like	Domain
DF [auth FA], DH [auth Fa]	IPR035427	Tim10-like domain superfamily	Homologous Superfamily
EH [auth Dl], FH [auth DL]	IPR000408	Regulator of chromosome condensation, RCC1	Repeat
EH [auth Dl], FH [auth DL]	IPR051210	Ubiquitin ligases and GEF domain-containing protein	Family
EH [auth Dl], FH [auth DL]	IPR009091	Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II	Homologous Superfamily
O [auth AE]	IPR022885	NAD(P)H-quinone oxidoreductase subunit D/H	Family
O [auth AE]	IPR014029	NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site	Conserved Site
O [auth AE]	IPR029014	[NiFe]-hydrogenase, large subunit	Homologous Superfamily
O [auth AE]	IPR001135	NADH-quinone oxidoreductase, subunit D	Domain
P [auth AF]	IPR001750	NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit	Domain
Q [auth AG]	IPR047324	Gamma carbonic anhydrase-like	Family
Q [auth AG]	IPR011004	Trimeric LpxA-like superfamily	Homologous Superfamily
Q [auth AG]	IPR050484	Transferase Hexapeptide/Carbonic Anhydrase	Family
Q [auth AG]	IPR001451	Hexapeptide repeat	Repeat
R [auth AH]	IPR001694	NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H	Family
R [auth AH]	IPR018086	NADH:ubiquinone oxidoreductase, subunit 1, conserved site	Conserved Site
S [auth AI]	IPR042128	NuoE domain	Domain
S [auth AI]	IPR002023	NADH-quinone oxidoreductase subunit E-like	Family
S [auth AI]	IPR041921	NADH-quinone oxidoreductase subunit E, N-terminal	Homologous Superfamily
S [auth AI]	IPR036249	Thioredoxin-like superfamily	Homologous Superfamily
B [auth A1]	IPR051207	Mitochondrial Complex I NDUFA9 Subunit	Family
B [auth A1]	IPR036291	NAD(P)-binding domain superfamily	Homologous Superfamily
B [auth A1]	IPR001509	NAD-dependent epimerase/dehydratase	Domain
U [auth AK]	IPR047324	Gamma carbonic anhydrase-like	Family
U [auth AK]	IPR011004	Trimeric LpxA-like superfamily	Homologous Superfamily
U [auth AK]	IPR050484	Transferase Hexapeptide/Carbonic Anhydrase	Family
V [auth AL]	IPR017900	4Fe-4S ferredoxin, iron-sulphur binding, conserved site	Conserved Site
V [auth AL]	IPR017896	4Fe-4S ferredoxin-type, iron-sulphur binding domain	Domain
V [auth AL]	IPR010226	NADH-quinone oxidoreductase, chain I	Family
W [auth AM]	IPR047324	Gamma carbonic anhydrase-like	Family
W [auth AM]	IPR011004	Trimeric LpxA-like superfamily	Homologous Superfamily
W [auth AM]	IPR050484	Transferase Hexapeptide/Carbonic Anhydrase	Family
X [auth AN]	IPR006806	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5	Family
Y [auth AO]	IPR037232	NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily	Homologous Superfamily
Y [auth AO]	IPR001268	NADH:ubiquinone oxidoreductase, 30kDa subunit	Domain
Y [auth AO]	IPR020396	NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site	Conserved Site
Z [auth AP]	IPR007763	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12	Family
BA [auth AR]	IPR038532	NADH dehydrogenase ubiquinone Fe-S protein 4-like superfamily	Homologous Superfamily
BA [auth AR]	IPR006885	NADH dehydrogenase ubiquinone Fe-S protein 4 mitochondrial-like	Family
CA [auth AS]	IPR016488	NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex, subunit 6	Family
C [auth A2]	IPR001623	DnaJ domain	Domain
C [auth A2]	IPR051938	Apoptosis and cytoskeleton modulation protein	Family
C [auth A2]	IPR036869	Chaperone J-domain superfamily	Homologous Superfamily
DA [auth AT]	IPR006138	NADH-ubiquinone oxidoreductase, 20 Kd subunit	Family
DA [auth AT]	IPR006137	NADH:ubiquinone oxidoreductase-like, 20kDa subunit	Domain
EA [auth AU]	IPR019721	NADH-ubiquinone oxidoreductase, 21kDa subunit, N-terminal	Domain
FA [auth AV]	IPR006162	Phosphopantetheine attachment site	PTM
FA [auth AV]	IPR009081	Phosphopantetheine binding ACP domain	Domain
FA [auth AV]	IPR036736	ACP-like superfamily	Homologous Superfamily
FA [auth AV]	IPR003231	Acyl carrier protein	Family
GA [auth AW]	IPR009081	Phosphopantetheine binding ACP domain	Domain
GA [auth AW]	IPR036736	ACP-like superfamily	Homologous Superfamily
GA [auth AW]	IPR003231	Acyl carrier protein	Family
HA [auth AX]	IPR000440	NADH:ubiquinone/plastoquinone oxidoreductase, chain 3	Family
HA [auth AX]	IPR038430	NADH:ubiquinone oxidoreductase, subunit 3 superfamily	Homologous Superfamily
JA [auth AZ]	IPR007741	Ribosomal protein/NADH dehydrogenase domain	Domain
JA [auth AZ]	IPR036249	Thioredoxin-like superfamily	Homologous Superfamily
JA [auth AZ]	IPR016464	NADH dehydrogenase [ubiquinone] (complex I), alpha subcomplex, subunit 2	Family
D [auth A3]	IPR000873	AMP-dependent synthetase/ligase domain	Domain
YA [auth BH]	IPR001750	NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit	Domain
ZA [auth BI]	IPR001055	Adrenodoxin-like	Family
ZA [auth BI]	IPR036010	2Fe-2S ferredoxin-like superfamily	Homologous Superfamily
ZA [auth BI]	IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	Domain
ZA [auth BI]	IPR012675	Beta-grasp domain superfamily	Homologous Superfamily
AB [auth BJ]	IPR013766	Thioredoxin domain	Domain
AB [auth BJ]	IPR050620	Thioredoxin-like	Family
AB [auth BJ]	IPR036249	Thioredoxin-like superfamily	Homologous Superfamily
IB [auth BR]	IPR019401	Zinc finger, CHCC-type	Domain
UB [auth CA]	IPR015939	Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal	Domain
UB [auth CA]	IPR003952	Fumarate reductase/succinate dehydrogenase, FAD-binding site	Binding Site
UB [auth CA]	IPR037099	Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily	Homologous Superfamily
UB [auth CA]	IPR036188	FAD/NAD(P)-binding domain superfamily	Homologous Superfamily
UB [auth CA]	IPR003953	FAD-dependent oxidoreductase 2, FAD binding domain	Domain
UB [auth CA]	IPR030664	FAD-dependent oxidoreductase SdhA/FrdA/AprA	Family
UB [auth CA]	IPR027477	Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily	Homologous Superfamily
UB [auth CA]	IPR014006	Succinate dehydrogenase/fumarate reductase, flavoprotein subunit	Family
UB [auth CA]	IPR011281	Succinate dehydrogenase, flavoprotein subunit	Family
WB [auth CB]	IPR025192	Succinate dehydogenase/fumarate reductase N-terminal	Domain
WB [auth CB]	IPR036010	2Fe-2S ferredoxin-like superfamily	Homologous Superfamily
WB [auth CB]	IPR006058	2Fe-2S ferredoxin, iron-sulphur binding site	Binding Site
WB [auth CB]	IPR004489	Succinate dehydrogenase/fumarate reductase iron-sulphur protein	Family
WB [auth CB]	IPR009051	Alpha-helical ferredoxin	Homologous Superfamily
WB [auth CB]	IPR050573	Succinate Dehydrogenase/Fumarate Reductase Iron-Sulfur	Family
WB [auth CB]	IPR017900	4Fe-4S ferredoxin, iron-sulphur binding, conserved site	Conserved Site
WB [auth CB]	IPR017896	4Fe-4S ferredoxin-type, iron-sulphur binding domain	Domain
WB [auth CB]	IPR012675	Beta-grasp domain superfamily	Homologous Superfamily
AC [auth CE]	IPR036291	NAD(P)-binding domain superfamily	Homologous Superfamily
GC [auth A], SC [auth a]	IPR007863	Peptidase M16, C-terminal	Domain
GC [auth A], SC [auth a]	IPR011765	Peptidase M16, N-terminal	Domain
GC [auth A], SC [auth a]	IPR011249	Metalloenzyme, LuxS/M16 peptidase-like	Homologous Superfamily
GC [auth A], SC [auth a]	IPR050361	Mitochondrial Processing Peptidase/Ubiquinol-cytochrome c Reductase Complex	Family
HC [auth B], TC [auth b]	IPR007863	Peptidase M16, C-terminal	Domain
HC [auth B], TC [auth b]	IPR011249	Metalloenzyme, LuxS/M16 peptidase-like	Homologous Superfamily
HC [auth B], TC [auth b]	IPR050361	Mitochondrial Processing Peptidase/Ubiquinol-cytochrome c Reductase Complex	Family
IC [auth C], UC [auth c]	IPR036150	Cytochrome b/b6, C-terminal domain superfamily	Homologous Superfamily
IC [auth C], UC [auth c]	IPR027387	Cytochrome b/b6-like domain superfamily	Homologous Superfamily
IC [auth C], UC [auth c]	IPR016174	Di-haem cytochrome, transmembrane	Homologous Superfamily
IC [auth C], UC [auth c]	IPR005797	Cytochrome b/b6, N-terminal domain	Domain
JC [auth D], VC [auth d]	IPR036909	Cytochrome c-like domain superfamily	Homologous Superfamily
JC [auth D], VC [auth d]	IPR002326	Cytochrome c1	Family
KC [auth E], WC [auth e]	IPR017941	Rieske [2Fe-2S] iron-sulphur domain	Domain
KC [auth E], WC [auth e]	IPR005805	Rieske iron-sulphur protein, C-terminal	Domain
KC [auth E], WC [auth e]	IPR036922	Rieske [2Fe-2S] iron-sulphur domain superfamily	Homologous Superfamily
KC [auth E], WC [auth e]	IPR014349	Rieske iron-sulphur protein	Family
LC [auth F], XC [auth f]	IPR023184	Ubiquinol-cytochrome C reductase hinge domain	Domain
LC [auth F], XC [auth f]	IPR036811	Ubiquinol-cytochrome C reductase hinge domain superfamily	Homologous Superfamily
ED [auth DA], EF [auth Da]	IPR036927	Cytochrome c oxidase-like, subunit I superfamily	Homologous Superfamily
ED [auth DA], EF [auth Da]	IPR000883	Cytochrome c oxidase subunit I	Family
ED [auth DA], EF [auth Da]	IPR023615	Cytochrome c oxidase, subunit I, copper-binding site	Binding Site
ED [auth DA], EF [auth Da]	IPR023616	Cytochrome c oxidase-like, subunit I domain	Domain
FD [auth DB], FF [auth Db]	IPR002429	Cytochrome c oxidase subunit II-like C-terminal	Domain
FD [auth DB], FF [auth Db]	IPR008972	Cupredoxin	Homologous Superfamily
FD [auth DB], FF [auth Db]	IPR045187	Cytochrome c/quinol oxidase subunit II	Family

Protein Modification Annotation

Modified Residue(s)
Chain	Residue(s)	Description
HD [auth DD], HF [auth Dd]	PSE
HD [auth DD], HF [auth Dd]	TPO	Parent Component: THR RESID: AA0038 PSI-MOD : O-phospho-L-threonine MOD:00047
LD [auth DH], LF [auth Dh]	AME	Parent Component: MET RESID: AA0038
MD [auth DI], MF [auth Di]	PSE	RESID: AA0038
TD [auth DQ], TF [auth Dq]	AME	Parent Component: MET RESID: AA0038
VD [auth DS], VF [auth Ds]	AME	Parent Component: MET RESID: AA0038
YD [auth DV], YF [auth Dv]	AME	Parent Component: MET RESID: AA0038
KE [auth EH], KG [auth Eh]	AME	Parent Component: MET RESID: AA0038
ME [auth EV], MG [auth Ev]	AME	Parent Component: MET RESID: AA0038
TE [auth EQ], TG [auth Eq]	AME	Parent Component: MET RESID: AA0038
DD [auth j], PC [auth J]	UNK	RESID: AA0038