7ZLM
Crystal structure of SOCS2:ElonginB:ElonginC in complex with compound MN551
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | SOCS box-like | 8032737 | 3001002 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | SH2 domain | 8032739 | 3000197 | SCOP2B (2022-06-29) |
G | SCOP2B Superfamily | SOCS box-like | 8032737 | 3001002 | SCOP2B (2022-06-29) |
G | SCOP2B Superfamily | SH2 domain | 8032739 | 3000197 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | SOCS box-like | 8032737 | 3001002 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | SH2 domain | 8032739 | 3000197 | SCOP2B (2022-06-29) |
J | SCOP2B Superfamily | SOCS box-like | 8032737 | 3001002 | SCOP2B (2022-06-29) |
J | SCOP2B Superfamily | SH2 domain | 8032739 | 3000197 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Ubiquitin-like | 8038575 | 3000157 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | Ubiquitin-like | 8038575 | 3000157 | SCOP2B (2022-06-29) |
H | SCOP2B Superfamily | Ubiquitin-like | 8038575 | 3000157 | SCOP2B (2022-06-29) |
K | SCOP2B Superfamily | Ubiquitin-like | 8038575 | 3000157 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | F_UNCLASSIFIED | e7zlmA1 | A: alpha arrays | X: SOCS box-like (From Topology) | H: SOCS box-like (From Topology) | T: SOCS box-like | F: F_UNCLASSIFIED | ECOD (1.6) |
A | F_UNCLASSIFIED | e7zlmA2 | A: a+b two layers | X: SH2 (From Topology) | H: SH2 (From Topology) | T: SH2 | F: F_UNCLASSIFIED | ECOD (1.6) |
G | F_UNCLASSIFIED | e7zlmG2 | A: alpha arrays | X: SOCS box-like (From Topology) | H: SOCS box-like (From Topology) | T: SOCS box-like | F: F_UNCLASSIFIED | ECOD (1.6) |
G | F_UNCLASSIFIED | e7zlmG1 | A: a+b two layers | X: SH2 (From Topology) | H: SH2 (From Topology) | T: SH2 | F: F_UNCLASSIFIED | ECOD (1.6) |
D | F_UNCLASSIFIED | e7zlmD2 | A: alpha arrays | X: SOCS box-like (From Topology) | H: SOCS box-like (From Topology) | T: SOCS box-like | F: F_UNCLASSIFIED | ECOD (1.6) |
D | F_UNCLASSIFIED | e7zlmD1 | A: a+b two layers | X: SH2 (From Topology) | H: SH2 (From Topology) | T: SH2 | F: F_UNCLASSIFIED | ECOD (1.6) |
J | F_UNCLASSIFIED | e7zlmJ2 | A: alpha arrays | X: SOCS box-like (From Topology) | H: SOCS box-like (From Topology) | T: SOCS box-like | F: F_UNCLASSIFIED | ECOD (1.6) |
J | F_UNCLASSIFIED | e7zlmJ1 | A: a+b two layers | X: SH2 (From Topology) | H: SH2 (From Topology) | T: SH2 | F: F_UNCLASSIFIED | ECOD (1.6) |
B | F_UNCLASSIFIED | e7zlmB1 | A: a+b two layers | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: F_UNCLASSIFIED | ECOD (1.6) |
E | F_UNCLASSIFIED | e7zlmE1 | A: a+b two layers | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: F_UNCLASSIFIED | ECOD (1.6) |
H | F_UNCLASSIFIED | e7zlmH1 | A: a+b two layers | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: F_UNCLASSIFIED | ECOD (1.6) |
K | F_UNCLASSIFIED | e7zlmK1 | A: a+b two layers | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: F_UNCLASSIFIED | ECOD (1.6) |
C | F_UNCLASSIFIED | e7zlmC1 | A: a+b two layers | X: POZ domain (From Topology) | H: POZ domain (From Topology) | T: POZ domain | F: F_UNCLASSIFIED | ECOD (1.6) |
I | F_UNCLASSIFIED | e7zlmI1 | A: a+b two layers | X: POZ domain (From Topology) | H: POZ domain (From Topology) | T: POZ domain | F: F_UNCLASSIFIED | ECOD (1.6) |
F | F_UNCLASSIFIED | e7zlmF1 | A: a+b two layers | X: POZ domain (From Topology) | H: POZ domain (From Topology) | T: POZ domain | F: F_UNCLASSIFIED | ECOD (1.6) |
L | F_UNCLASSIFIED | e7zlmL1 | A: a+b two layers | X: POZ domain (From Topology) | H: POZ domain (From Topology) | T: POZ domain | F: F_UNCLASSIFIED | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00017 | SH2 domain (SH2) | SH2 domain | - | Domain | |
PF07525 | SOCS box (SOCS_box) | SOCS box | The SOCS box acts as a bridge between specific substrate- binding domains and more generic proteins that comprise a large family of E3 ubiquitin protein ligases. | Domain | |
PF00240 | Ubiquitin family (ubiquitin) | Ubiquitin family | This family contains a number of ubiquitin-like proteins: SUMO (smt3 homologue) (see Swiss:Q02724), Nedd8 (see Swiss:P29595), Elongin B (see Swiss:Q15370), Rub1 (see Swiss:Q9SHE7), and Parkin (see Swiss:O60260). A number of them are thought to carry ... | Domain | |
PF03931 | Skp1 family, tetramerisation domain (Skp1_POZ) | Skp1 family, tetramerisation domain | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR036860 | SH2 domain superfamily | Homologous Superfamily | |
IPR000980 | SH2 domain | Domain | |
IPR028410 | Suppressor of cytokine signalling 2, SOCS box domain | Domain | |
IPR036036 | SOCS box-like domain superfamily | Homologous Superfamily | |
IPR001496 | SOCS box domain | Domain | |
IPR035862 | SOCS2, SH2 domain | Domain | |
IPR000626 | Ubiquitin-like domain | Domain | |
IPR039049 | Elongin B | Family | |
IPR029071 | Ubiquitin-like domain superfamily | Homologous Superfamily | |
IPR016073 | SKP1 component, POZ domain | Domain | |
IPR001232 | S-phase kinase-associated protein 1-like | Family | |
IPR039948 | Elongin-C | Family | |
IPR011333 | SKP1/BTB/POZ domain superfamily | Homologous Superfamily |