7ZIN
JC Polyomavirus VP1 in complex with 6'-Sialyllactose glycomacromolecules (aliphatic linker)
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A [auth AAA] | SCOP2B Superfamily | Group I dsDNA viruses | 8081603 | 3000939 | SCOP2B (2021-05-27) |
B [auth BBB] | SCOP2B Superfamily | Group I dsDNA viruses | 8081603 | 3000939 | SCOP2B (2021-05-27) |
C [auth CCC] | SCOP2B Superfamily | Group I dsDNA viruses | 8081603 | 3000939 | SCOP2B (2021-05-27) |
D [auth DDD] | SCOP2B Superfamily | Group I dsDNA viruses | 8081603 | 3000939 | SCOP2B (2021-05-27) |
E [auth EEE] | SCOP2B Superfamily | Group I dsDNA viruses | 8081603 | 3000939 | SCOP2B (2021-05-27) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth AAA] | PF00718 | e7zinAAA1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: PF00718 | ECOD (1.6) |
B [auth BBB] | PF00718 | e7zinBBB1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: PF00718 | ECOD (1.6) |
C [auth CCC] | PF00718 | e7zinCCC1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: PF00718 | ECOD (1.6) |
D [auth DDD] | PF00718 | e7zinDDD1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: PF00718 | ECOD (1.6) |
E [auth EEE] | PF00718 | e7zinEEE1 | A: beta sandwiches | X: jelly-roll | H: Nucleoplasmin-like/VP (viral coat and capsid proteins) (From Topology) | T: Nucleoplasmin-like/VP (viral coat and capsid proteins) | F: PF00718 | ECOD (1.6) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth AAA], B [auth BBB], C [auth CCC], D [auth DDD], E [auth EEE] | IPR011222 | Double-stranded DNA virus, group I, capsid | Homologous Superfamily |
A [auth AAA], B [auth BBB], C [auth CCC], D [auth DDD], E [auth EEE] | IPR000662 | Capsid protein VP1,Polyomavirus | Family |
A [auth AAA], B [auth BBB], C [auth CCC], D [auth DDD], E [auth EEE] | IPR036931 | Polyomavirus capsid protein VP1 superfamily | Homologous Superfamily |