7Z5R
Structure of the mouse 8-oxoguanine DNA Glycosylase mOGG1 in complex with ligand TH012035
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF00730 | e7z5rA1 | A: alpha arrays | X: HhH/H2TH | H: SAM/DNA-glycosylase | T: DNA-glycosylase | F: PF00730 | ECOD (1.6) |
A | PF07934 | e7z5rA2 | A: a+b two layers | X: TBP-like | H: TATA-box binding protein-like (From Topology) | T: TATA-box binding protein-like | F: PF07934 | ECOD (1.6) |
B | PF00730 | e7z5rB1 | A: alpha arrays | X: HhH/H2TH | H: SAM/DNA-glycosylase | T: DNA-glycosylase | F: PF00730 | ECOD (1.6) |
B | PF07934 | e7z5rB2 | A: a+b two layers | X: TBP-like | H: TATA-box binding protein-like (From Topology) | T: TATA-box binding protein-like | F: PF07934 | ECOD (1.6) |
C | PF00730 | e7z5rC2 | A: alpha arrays | X: HhH/H2TH | H: SAM/DNA-glycosylase | T: DNA-glycosylase | F: PF00730 | ECOD (1.6) |
C | PF07934 | e7z5rC1 | A: a+b two layers | X: TBP-like | H: TATA-box binding protein-like (From Topology) | T: TATA-box binding protein-like | F: PF07934 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF07934 | 8-oxoguanine DNA glycosylase, N-terminal domain (OGG_N) | 8-oxoguanine DNA glycosylase, N-terminal domain | - | Family | |
PF00730 | HhH-GPD superfamily base excision DNA repair protein (HhH-GPD) | HhH-GPD superfamily base excision DNA repair protein | This family contains a diverse range of structurally related DNA repair proteins. The superfamily is called the HhH-GPD family after its hallmark Helix-hairpin-helix and Gly/Pro rich loop followed by a conserved aspartate [2]. This includes endonucle ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR003265 | HhH-GPD domain | Domain | |
IPR023170 | Helix-hairpin-helix, base-excision DNA repair, C-terminal | Homologous Superfamily | |
IPR011257 | DNA glycosylase | Homologous Superfamily | |
IPR052054 | Oxidative DNA damage repair enzyme | Family | |
IPR012904 | 8-oxoguanine DNA glycosylase, N-terminal | Domain | |
IPR004577 | 8-oxoguanine DNA-glycosylase | Family |