7YI1
Cryo-EM structure of Eaf3 CHD bound to H3K36me3 nucleosome
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A [auth B] | SCOP2B Superfamily | Core histone-like | 8042439 | 3001387 | SCOP2B (2021-05-27) |
D [auth F] | SCOP2B Superfamily | Core histone-like | 8042439 | 3001387 | SCOP2B (2021-05-27) |
B [auth C] | SCOP2B Superfamily | Core histone-like | 8041278 | 3001387 | SCOP2B (2021-05-27) |
E [auth G] | SCOP2B Superfamily | Core histone-like | 8041278 | 3001387 | SCOP2B (2021-05-27) |
C [auth D] | SCOP2B Superfamily | Core histone-like | 8041279 | 3001387 | SCOP2B (2021-05-27) |
F [auth H] | SCOP2B Superfamily | Core histone-like | 8041279 | 3001387 | SCOP2B (2021-05-27) |
I [auth K] | SCOP2B Superfamily | Chromo domain-like | 8089214 | 3000161 | SCOP2B (2021-05-27) |
J [auth L] | SCOP2B Superfamily | Chromo domain-like | 8089214 | 3000161 | SCOP2B (2021-05-27) |
K [auth A] | SCOP2B Superfamily | Core histone-like | 8041272 | 3001387 | SCOP2B (2021-05-27) |
L [auth E] | SCOP2B Superfamily | Core histone-like | 8041272 | 3001387 | SCOP2B (2021-05-27) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth B] | PF15511 | e7yi1B1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: PF15511 | ECOD (1.6) |
D [auth F] | PF15511 | e7yi1F1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: PF15511 | ECOD (1.6) |
B [auth C] | PF00125,PF16211 | e7yi1C1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: PF00125,PF16211 | ECOD (1.6) |
E [auth G] | PF00125,PF16211 | e7yi1G1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: PF00125,PF16211 | ECOD (1.6) |
C [auth D] | PF00125 | e7yi1D1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: PF00125 | ECOD (1.6) |
F [auth H] | PF00125 | e7yi1H1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: PF00125 | ECOD (1.6) |
I [auth K] | PF22732 | e7yi1K1 | A: beta barrels | X: SH3 | H: Chromo domain-like (From Topology) | T: Chromo domain-like | F: PF22732 | ECOD (1.6) |
J [auth L] | PF22732 | e7yi1L1 | A: beta barrels | X: SH3 | H: Chromo domain-like (From Topology) | T: Chromo domain-like | F: PF22732 | ECOD (1.6) |
K [auth A] | PF00125 | e7yi1A1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: PF00125 | ECOD (1.6) |
L [auth E] | PF00125 | e7yi1E1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: Histone | F: PF00125 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth B], D [auth F] | PF15511 | Centromere kinetochore component CENP-T histone fold (CENP-T_C) | Centromere kinetochore component CENP-T histone fold | CENP-T is a family of vertebral kinetochore proteins that associates directly with CENP-W. The N-terminus of CENP-T proteins interacts directly with the Ndc80 complex in the outer kinetochore. Importantly, the CENP-T-W complex does not directly asso ... | Domain |
B [auth C], E [auth G] | PF16211 | C-terminus of histone H2A (Histone_H2A_C) | C-terminus of histone H2A | - | Family |
I [auth K], J [auth L] | PF11717 | RNA binding activity-knot of a chromodomain (Tudor-knot) | RNA binding activity-knot of a chromodomain | - | Family |
I [auth K], J [auth L] | PF22732 | MSL3 chromodomain-like (MSL3_chromo-like) | MSL3 chromodomain-like | This domain is found in Male-specific lethal-3 (MSL3) and other related proteins such as MRG15 transcription factor. MSL3 resides in the MSL (male-specific lethal) complex, which upregulates transcription by spreading the histone H4 Lys16 acetyl mark ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Protein Modification Annotation
Modified Residue(s) | ||
---|---|---|
Chain | Residue(s) | Description |
K [auth A], L [auth E] | M3L | Parent Component: LYS :  AA0074 :  N6,N6,N6-trimethyl-L-lysine MOD:00083 |