7XIB
Cryo-EM structure of human DNMT1 (aa:351-1616) in complex with ubiquitinated H3 and hemimethylated DNA analog (CXXC-disordered form)
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF01426 | e7xibA3 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: PF01426 | ECOD (1.6) |
A | PF00145 | e7xibA2 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Rossmann-related | T: S-adenosyl-L-methionine-dependent methyltransferases | F: PF00145 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01426 | BAH domain (BAH) | BAH domain | This domain has been called BAH (Bromo adjacent homology) domain and has also been called ELM1 and BAM (Bromo adjacent motif) domain. The function of this domain is unknown but may be involved in protein-protein interaction [3]. | Domain | |
PF00145 | C-5 cytosine-specific DNA methylase (DNA_methylase) | C-5 cytosine-specific DNA methylase | - | Domain | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR001025 | Bromo adjacent homology (BAH) domain | Domain | |
IPR018117 | DNA methylase, C-5 cytosine-specific, active site | Active Site | |
IPR002857 | Zinc finger, CXXC-type | Domain | |
IPR022702 | DNA (cytosine-5)-methyltransferase 1, replication foci domain | Domain | |
IPR031303 | DNA methylase, C-5 cytosine-specific, conserved site | Conserved Site | |
IPR017198 | DNA (cytosine-5)-methyltransferase 1-like | Family | |
IPR029063 | S-adenosyl-L-methionine-dependent methyltransferase superfamily | Homologous Superfamily | |
IPR010506 | DMAP1-binding domain | Domain | |
IPR043151 | Bromo adjacent homology (BAH) domain superfamily | Homologous Superfamily | |
IPR050390 | DNA Cytosine-5 Methyltransferase | Family | |
IPR001525 | C-5 cytosine methyltransferase | Family |