7W3I
Structure of USP14-bound human 26S proteasome in substrate-inhibited state SB_USP14
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A [auth x] | SCOP2B Superfamily | Cysteine proteinases | 8037489 | 3001808 | SCOP2B (2022-06-29) |
I [auth H] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8064014 | 3000131 | SCOP2B (2022-06-29) |
W [auth h] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8064014 | 3000131 | SCOP2B (2022-06-29) |
J [auth I] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8064036 | 3000131 | SCOP2B (2022-06-29) |
X [auth i] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8064036 | 3000131 | SCOP2B (2022-06-29) |
K [auth J] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8064004 | 3000131 | SCOP2B (2022-06-29) |
Y [auth j] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8064004 | 3000131 | SCOP2B (2022-06-29) |
L [auth K] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8064022 | 3000131 | SCOP2B (2022-06-29) |
Z [auth k] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8064022 | 3000131 | SCOP2B (2022-06-29) |
AA [auth l] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8064060 | 3000131 | SCOP2B (2022-06-29) |
M [auth L] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8064060 | 3000131 | SCOP2B (2022-06-29) |
BA [auth m] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8064054 | 3000131 | SCOP2B (2022-06-29) |
N [auth M] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8064054 | 3000131 | SCOP2B (2022-06-29) |
CA [auth n] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8079175 | 3000131 | SCOP2B (2022-06-29) |
O [auth N] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8079175 | 3000131 | SCOP2B (2022-06-29) |
DA [auth o] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8064074 | 3000131 | SCOP2B (2022-06-29) |
P [auth O] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8064074 | 3000131 | SCOP2B (2022-06-29) |
GA [auth r] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8079492 | 3000131 | SCOP2B (2022-06-29) |
S [auth R] | SCOP2B Superfamily | Class II glutamine amidotransferases | 8079492 | 3000131 | SCOP2B (2022-06-29) |
JA [auth y] | SCOP2B Superfamily | Ubiquitin-like | 8101457 | 3000157 | SCOP2B (2022-06-29) |
NA [auth X] | SCOP2B Superfamily | Winged helix DNA-binding domain | 8067905 | 3000034 | SCOP2B (2022-06-29) |
OA [auth Y] | SCOP2B Superfamily | Winged helix DNA-binding domain | 8057047 | 3000034 | SCOP2B (2022-06-29) |
OA [auth Y] | SCOP2B Superfamily | TPR-like | 8057045 | 3001345 | SCOP2B (2022-06-29) |
PA [auth Z] | SCOP2B Superfamily | JAB1/MPN domain-like | 8053252 | 3001105 | SCOP2B (2022-06-29) |
PA [auth Z] | SCOP2B Superfamily | EIF3 subunit F C-terminal domain-like | 8053251 | 3002167 | SCOP2B (2022-06-29) |
SA [auth c] | SCOP2B Superfamily | JAB1/MPN domain-like | 8053255 | 3001105 | SCOP2B (2022-06-29) |
SA [auth c] | SCOP2B Superfamily | EIF3 subunit F C-terminal domain-like | 8053254 | 3002167 | SCOP2B (2022-06-29) |
VA [auth e] | SCOP2B Superfamily | DSS1/SEM1 protein family | 8053396 | 3002183 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
E [auth D] | PF16450 | e7w3iD2 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: PF16450 | ECOD (1.6) |
E [auth D] | PF17862 | e7w3iD1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: PF17862 | ECOD (1.6) |
E [auth D] | PF00004 | e7w3iD3 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF00004 | ECOD (1.6) |
F [auth E] | PF16450 | e7w3iE3 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: PF16450 | ECOD (1.6) |
F [auth E] | PF17862 | e7w3iE2 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: PF17862 | ECOD (1.6) |
F [auth E] | PF00004 | e7w3iE1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF00004 | ECOD (1.6) |
H [auth G] | PF00227,PF10584 | e7w3iG1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227,PF10584 | ECOD (1.6) |
V [auth g] | PF00227,PF10584 | e7w3ig1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227,PF10584 | ECOD (1.6) |
I [auth H] | PF00227,PF10584 | e7w3iH1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227,PF10584 | ECOD (1.6) |
W [auth h] | PF00227,PF10584 | e7w3ih1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227,PF10584 | ECOD (1.6) |
J [auth I] | PF00227,PF10584 | e7w3iI1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227,PF10584 | ECOD (1.6) |
X [auth i] | PF00227,PF10584 | e7w3ii1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227,PF10584 | ECOD (1.6) |
K [auth J] | PF00227,PF10584 | e7w3iJ1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227,PF10584 | ECOD (1.6) |
Y [auth j] | PF00227,PF10584 | e7w3ij1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227,PF10584 | ECOD (1.6) |
L [auth K] | PF00227,PF10584 | e7w3iK1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227,PF10584 | ECOD (1.6) |
Z [auth k] | PF00227,PF10584 | e7w3ik1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227,PF10584 | ECOD (1.6) |
AA [auth l] | PF00227,PF10584 | e7w3il1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227,PF10584 | ECOD (1.6) |
M [auth L] | PF00227,PF10584 | e7w3iL1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227,PF10584 | ECOD (1.6) |
BA [auth m] | PF00227,PF10584 | e7w3im1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227,PF10584 | ECOD (1.6) |
N [auth M] | PF00227,PF10584 | e7w3iM1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227,PF10584 | ECOD (1.6) |
CA [auth n] | PF00227 | e7w3in1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227 | ECOD (1.6) |
O [auth N] | PF00227 | e7w3iN1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227 | ECOD (1.6) |
DA [auth o] | PF00227,PF12465 | e7w3io1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227,PF12465 | ECOD (1.6) |
P [auth O] | PF00227,PF12465 | e7w3iO1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227,PF12465 | ECOD (1.6) |
EA [auth p] | PF00227 | e7w3ip1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227 | ECOD (1.6) |
Q [auth P] | PF00227 | e7w3iP1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227 | ECOD (1.6) |
FA [auth q] | PF00227 | e7w3iq1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227 | ECOD (1.6) |
R [auth Q] | PF00227 | e7w3iQ1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227 | ECOD (1.6) |
GA [auth r] | PF00227 | e7w3ir1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227 | ECOD (1.6) |
S [auth R] | PF00227 | e7w3iR1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227 | ECOD (1.6) |
HA [auth s] | PF00227 | e7w3is1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227 | ECOD (1.6) |
T [auth S] | PF00227 | e7w3iS1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227 | ECOD (1.6) |
IA [auth t] | PF00227 | e7w3it1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227 | ECOD (1.6) |
U [auth T] | PF00227 | e7w3iT1 | A: a+b four layers | X: Ntn/PP2C | H: Ntn | T: Proteasome subunits | F: PF00227 | ECOD (1.6) |
JA [auth y] | PF00240 | e7w3iy1 | A: a+b two layers | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: PF00240 | ECOD (1.6) |
KA [auth U] | PF18004 | e7w3iU2 | A: beta sandwiches | X: 26S proteasome subunit Rpn2 C-terminal domain (From Topology) | H: 26S proteasome subunit Rpn2 C-terminal domain (From Topology) | T: 26S proteasome subunit Rpn2 C-terminal domain | F: PF18004 | ECOD (1.6) |
KA [auth U] | PF21505 | e7w3iU1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: 26S proteasome subunit Rpn2 N-terminal domain (From Topology) | T: 26S proteasome subunit Rpn2 N-terminal domain | F: PF21505 | ECOD (1.6) |
KA [auth U] | PF01851 | e7w3iU3 | A: alpha superhelices | X: Repetitive alpha hairpins | H: Proteasome/cyclosome (PC) repeat (From Topology) | T: Proteasome/cyclosome (PC) repeat | F: PF01851 | ECOD (1.6) |
LA [auth V] | PF01399 | e7w3iV1 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: PF01399 | ECOD (1.6) |
LA [auth V] | F_UNCLASSIFIED | e7w3iV3 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: F_UNCLASSIFIED | ECOD (1.6) |
LA [auth V] | PF08375 | e7w3iV2 | A: extended segments | X: 26S proteasome regulatory subunits C-terminal helices | H: 26S proteasome regulatory subunit RPN3 C-terminal helix (From Topology) | T: 26S proteasome regulatory subunit RPN3 C-terminal helix | F: PF08375 | ECOD (1.6) |
MA [auth W] | PF01399 | e7w3iW3 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: PF01399 | ECOD (1.6) |
MA [auth W] | PF22241 | e7w3iW2 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: PF22241 | ECOD (1.6) |
MA [auth W] | PF18098 | e7w3iW1 | A: extended segments | X: 26S proteasome regulatory subunits C-terminal helices | H: 26S proteasome regulatory subunit RPN5 C-terminal helix (From Topology) | T: 26S proteasome regulatory subunit RPN5 C-terminal helix | F: PF18098 | ECOD (1.6) |
NA [auth X] | PF01399 | e7w3iX2 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: PF01399 | ECOD (1.6) |
NA [auth X] | PF18055 | e7w3iX1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: PF18055 | ECOD (1.6) |
NA [auth X] | PF18503 | e7w3iX3 | A: extended segments | X: 26S proteasome regulatory subunits C-terminal helices | H: 26S proteasome regulatory subunit RPN6 C-termial helix (From Topology) | T: 26S proteasome regulatory subunit RPN6 C-termial helix | F: PF18503 | ECOD (1.6) |
OA [auth Y] | PF01399 | e7w3iY3 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: PF01399 | ECOD (1.6) |
OA [auth Y] | PF10602 | e7w3iY1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: PF10602 | ECOD (1.6) |
OA [auth Y] | PF21154 | e7w3iY2 | A: extended segments | X: 26S proteasome regulatory subunits C-terminal helices | H: 26S proteasome regulatory subunit RPN7 C-terminal helix (From Topology) | T: 26S proteasome regulatory subunit RPN7 C-terminal helix | F: PF21154 | ECOD (1.6) |
PA [auth Z] | PF01398 | e7w3iZ1 | A: a+b three layers | X: Cytidine deaminase-like (From Topology) | H: Cytidine deaminase-like (From Topology) | T: Cytidine deaminase-like | F: PF01398 | ECOD (1.6) |
PA [auth Z] | PF13012 | e7w3iZ2 | A: extended segments | X: 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain (From Topology) | H: 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain (From Topology) | T: 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain | F: PF13012 | ECOD (1.6) |
QA [auth a] | PF01399 | e7w3ia2 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: PF01399 | ECOD (1.6) |
QA [auth a] | PF22037 | e7w3ia3 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: PF22037 | ECOD (1.6) |
QA [auth a] | F_UNCLASSIFIED | e7w3ia1 | A: extended segments | X: 26S proteasome regulatory subunits C-terminal helices | H: 26S proteasome regulatory subunit RPN9 C-terminal helix (From Topology) | T: 26S proteasome regulatory subunit RPN9 C-terminal helix | F: F_UNCLASSIFIED | ECOD (1.6) |
RA [auth b] | PF13519 | e7w3ib1 | A: a/b three-layered sandwiches | X: HAD domain-like | H: HAD domain-related | T: vWA-like | F: PF13519 | ECOD (1.6) |
SA [auth c] | PF01398 | e7w3ic2 | A: a+b three layers | X: Cytidine deaminase-like (From Topology) | H: Cytidine deaminase-like (From Topology) | T: Cytidine deaminase-like | F: PF01398 | ECOD (1.6) |
SA [auth c] | F_UNCLASSIFIED | e7w3ic1 | A: extended segments | X: 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain (From Topology) | H: 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain (From Topology) | T: 26S proteasome regulatory subunit RPN8/RPN11 C-terminal domain | F: F_UNCLASSIFIED | ECOD (1.6) |
TA [auth d] | PF10075 | e7w3id1 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: PF10075 | ECOD (1.6) |
TA [auth d] | PF10075 | e7w3id2 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: PF10075 | ECOD (1.6) |
UA [auth f] | PF17781 | e7w3if1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: 26S proteasome subunit Rpn2 N-terminal domain (From Topology) | T: 26S proteasome subunit Rpn2 N-terminal domain | F: PF17781 | ECOD (1.6) |
UA [auth f] | PF01851,PF18051 | e7w3if2 | A: alpha superhelices | X: Repetitive alpha hairpins | H: Proteasome/cyclosome (PC) repeat (From Topology) | T: Proteasome/cyclosome (PC) repeat | F: PF01851,PF18051 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
B [auth A] | PF22037 | PSD13 N-terminal repeats (PSD13_N) | PSD13 N-terminal repeats | - | Repeat |
B [auth A] | PF17862 | AAA+ lid domain (AAA_lid_3) | AAA+ lid domain | This entry represents the alpha helical AAA+ lid domain that is found to the C-terminus of AAA domains. | Domain |
B [auth A] | PF01399 | PCI domain (PCI) | PCI domain | This domain has also been called the PINT motif (Proteasome, Int-6, Nip-1 and TRIP-15) [1]. | Domain |
B [auth A] | PF21236 | 26S proteasome regulatory subunit 7, OB domain (PRS7_OB) | 26S proteasome regulatory subunit 7, OB domain | This is the OB domain from 26S proteasome regulatory subunit 7 (PRS7, also known as PSMC2, Rpt1 or MSS1), a component of the 19S proteasome cap [1-5]. These are one of six ATPases of the regulatory particle that form a heterohexameric ring. This doma ... | Domain |
B [auth A] | PF00004 | ATPase family associated with various cellular activities (AAA) (AAA) | ATPase family associated with various cellular activities (AAA) | AAA family proteins often perform chaperone-like functions that assist in the assembly, operation, or disassembly of protein complexes [2]. | Domain |
C [auth B] | PF13519 | von Willebrand factor type A domain (VWA_2) | von Willebrand factor type A domain | - | Domain |
C [auth B] | PF16450 | Proteasomal ATPase OB C-terminal domain (Prot_ATP_ID_OB_C) | Proteasomal ATPase OB C-terminal domain | This is the C-terminal interdomain (ID) or oligonucleotide binding (OB) domain of proteasomal ATPase [1-2] | Domain |
C [auth B] | PF17862 | AAA+ lid domain (AAA_lid_3) | AAA+ lid domain | This entry represents the alpha helical AAA+ lid domain that is found to the C-terminus of AAA domains. | Domain |
C [auth B] | PF00004 | ATPase family associated with various cellular activities (AAA) (AAA) | ATPase family associated with various cellular activities (AAA) | AAA family proteins often perform chaperone-like functions that assist in the assembly, operation, or disassembly of protein complexes [2]. | Domain |
D [auth C] | PF16450 | Proteasomal ATPase OB C-terminal domain (Prot_ATP_ID_OB_C) | Proteasomal ATPase OB C-terminal domain | This is the C-terminal interdomain (ID) or oligonucleotide binding (OB) domain of proteasomal ATPase [1-2] | Domain |
D [auth C] | PF01398 | JAB1/Mov34/MPN/PAD-1 ubiquitin protease (JAB) | JAB1/Mov34/MPN/PAD-1 ubiquitin protease | - | Family |
D [auth C] | PF17862 | AAA+ lid domain (AAA_lid_3) | AAA+ lid domain | This entry represents the alpha helical AAA+ lid domain that is found to the C-terminus of AAA domains. | Domain |
D [auth C] | PF00004 | ATPase family associated with various cellular activities (AAA) (AAA) | ATPase family associated with various cellular activities (AAA) | AAA family proteins often perform chaperone-like functions that assist in the assembly, operation, or disassembly of protein complexes [2]. | Domain |
E [auth D] | PF16450 | Proteasomal ATPase OB C-terminal domain (Prot_ATP_ID_OB_C) | Proteasomal ATPase OB C-terminal domain | This is the C-terminal interdomain (ID) or oligonucleotide binding (OB) domain of proteasomal ATPase [1-2] | Domain |
E [auth D] | PF10075 | CSN8/PSMD8/EIF3K family (CSN8_PSD8_EIF3K) | CSN8/PSMD8/EIF3K family | - | Family |
E [auth D] | PF17862 | AAA+ lid domain (AAA_lid_3) | AAA+ lid domain | This entry represents the alpha helical AAA+ lid domain that is found to the C-terminus of AAA domains. | Domain |
E [auth D] | PF00004 | ATPase family associated with various cellular activities (AAA) (AAA) | ATPase family associated with various cellular activities (AAA) | AAA family proteins often perform chaperone-like functions that assist in the assembly, operation, or disassembly of protein complexes [2]. | Domain |
F [auth E] | PF16450 | Proteasomal ATPase OB C-terminal domain (Prot_ATP_ID_OB_C) | Proteasomal ATPase OB C-terminal domain | This is the C-terminal interdomain (ID) or oligonucleotide binding (OB) domain of proteasomal ATPase [1-2] | Domain |
F [auth E] | PF17862 | AAA+ lid domain (AAA_lid_3) | AAA+ lid domain | This entry represents the alpha helical AAA+ lid domain that is found to the C-terminus of AAA domains. | Domain |
F [auth E] | PF00004 | ATPase family associated with various cellular activities (AAA) (AAA) | ATPase family associated with various cellular activities (AAA) | AAA family proteins often perform chaperone-like functions that assist in the assembly, operation, or disassembly of protein complexes [2]. | Domain |
G [auth F] | PF16450 | Proteasomal ATPase OB C-terminal domain (Prot_ATP_ID_OB_C) | Proteasomal ATPase OB C-terminal domain | This is the C-terminal interdomain (ID) or oligonucleotide binding (OB) domain of proteasomal ATPase [1-2] | Domain |
G [auth F] | PF17781 | RPN1 N-terminal domain (RPN1_RPN2_N) | RPN1 N-terminal domain | This domain is found at the N-terminus of the 26S proteasome regulatory subunits RPN1 (also known as 26S proteasome non-ATPase regulatory subunit 2 (PMSD2)[1]. The domain is formed by an array of alpha helices [2]. | Domain |
G [auth F] | PF17862 | AAA+ lid domain (AAA_lid_3) | AAA+ lid domain | This entry represents the alpha helical AAA+ lid domain that is found to the C-terminus of AAA domains. | Domain |
G [auth F] | PF00004 | ATPase family associated with various cellular activities (AAA) (AAA) | ATPase family associated with various cellular activities (AAA) | AAA family proteins often perform chaperone-like functions that assist in the assembly, operation, or disassembly of protein complexes [2]. | Domain |
H [auth G], V [auth g] | PF00227 | Proteasome subunit (Proteasome) | Proteasome subunit | The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ... | Domain |
H [auth G], V [auth g] | PF10584 | Proteasome subunit A N-terminal signature (Proteasome_A_N) | Proteasome subunit A N-terminal signature | - | Family |
I [auth H], W [auth h] | PF00227 | Proteasome subunit (Proteasome) | Proteasome subunit | The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ... | Domain |
I [auth H], W [auth h] | PF10584 | Proteasome subunit A N-terminal signature (Proteasome_A_N) | Proteasome subunit A N-terminal signature | - | Family |
J [auth I], X [auth i] | PF00227 | Proteasome subunit (Proteasome) | Proteasome subunit | The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ... | Domain |
J [auth I], X [auth i] | PF10584 | Proteasome subunit A N-terminal signature (Proteasome_A_N) | Proteasome subunit A N-terminal signature | - | Family |
K [auth J], Y [auth j] | PF00227 | Proteasome subunit (Proteasome) | Proteasome subunit | The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ... | Domain |
K [auth J], Y [auth j] | PF10584 | Proteasome subunit A N-terminal signature (Proteasome_A_N) | Proteasome subunit A N-terminal signature | - | Family |
L [auth K], Z [auth k] | PF00227 | Proteasome subunit (Proteasome) | Proteasome subunit | The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ... | Domain |
L [auth K], Z [auth k] | PF10584 | Proteasome subunit A N-terminal signature (Proteasome_A_N) | Proteasome subunit A N-terminal signature | - | Family |
AA [auth l], M [auth L] | PF00227 | Proteasome subunit (Proteasome) | Proteasome subunit | The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ... | Domain |
AA [auth l], M [auth L] | PF10584 | Proteasome subunit A N-terminal signature (Proteasome_A_N) | Proteasome subunit A N-terminal signature | - | Family |
BA [auth m], N [auth M] | PF00227 | Proteasome subunit (Proteasome) | Proteasome subunit | The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ... | Domain |
BA [auth m], N [auth M] | PF10584 | Proteasome subunit A N-terminal signature (Proteasome_A_N) | Proteasome subunit A N-terminal signature | - | Family |
DA [auth o], P [auth O] | PF12465 | Proteasome beta subunits C terminal (Pr_beta_C) | Proteasome beta subunits C terminal | - | Family |
EA [auth p], Q [auth P] | PF00227 | Proteasome subunit (Proteasome) | Proteasome subunit | The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ... | Domain |
FA [auth q], R [auth Q] | PF00227 | Proteasome subunit (Proteasome) | Proteasome subunit | The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ... | Domain |
HA [auth s], T [auth S] | PF00227 | Proteasome subunit (Proteasome) | Proteasome subunit | The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ... | Domain |
IA [auth t], U [auth T] | PF00227 | Proteasome subunit (Proteasome) | Proteasome subunit | The proteasome is a multisubunit structure that degrades proteins. Protein degradation is an essential component of regulation because proteins can become misfolded, damaged, or unnecessary. Proteasomes and their homologues vary greatly in complexity ... | Domain |
KA [auth U] | PF13646 | HEAT repeats (HEAT_2) | HEAT repeats | - | Repeat |
KA [auth U] | PF18004 | 26S proteasome regulatory subunit RPN2 C-terminal domain (RPN2_C) | 26S proteasome regulatory subunit RPN2 C-terminal domain | This is the C-terminal domain found in S. cerevisiae Rpn2 (26S proteasome regulatory subunit RPN2) as well as other eukaryotic species. A study revealed that the C-terminal 52 residues of the Rpn2 C-terminal domain are responsible for mediating inter ... | Domain |
KA [auth U] | PF01851 | Proteasome/cyclosome repeat (PC_rep) | Proteasome/cyclosome repeat | - | Repeat |
LA [auth V] | PF08375 | Proteasome regulatory subunit C-terminal (Rpn3_C) | Proteasome regulatory subunit C-terminal | - | Family |
LA [auth V] | PF01399 | PCI domain (PCI) | PCI domain | This domain has also been called the PINT motif (Proteasome, Int-6, Nip-1 and TRIP-15) [1]. | Domain |
MA [auth W] | PF18098 | 26S proteasome regulatory subunit RPN5 C-terminal domain (RPN5_C) | 26S proteasome regulatory subunit RPN5 C-terminal domain | This is the C-terminal domain of the 26S proteasome regulatory subunit RPN5 proteins.This helical domain can be found adjacent to Pfam:PF01399. The 26S proteasome is the major ATP-dependent protease in eukaryotes. Three subcomplexes form this degrada ... | Domain |
MA [auth W] | PF22241 | PSMD12/CSN4, N-terminal (PSMD12-CSN4_N) | PSMD12/CSN4, N-terminal | - | Repeat |
MA [auth W] | PF01399 | PCI domain (PCI) | PCI domain | This domain has also been called the PINT motif (Proteasome, Int-6, Nip-1 and TRIP-15) [1]. | Domain |
NA [auth X] | PF18503 | 26S proteasome subunit RPN6 C-terminal helix domain (RPN6_C_helix) | 26S proteasome subunit RPN6 C-terminal helix domain | This is the C-terminal helix domain found in RPN6, a component of the 26S proteasome. The C-terminal helices are essential for lid assembly [1, 2]. | Domain |
NA [auth X] | PF01399 | PCI domain (PCI) | PCI domain | This domain has also been called the PINT motif (Proteasome, Int-6, Nip-1 and TRIP-15) [1]. | Domain |
NA [auth X] | PF00443 | Ubiquitin carboxyl-terminal hydrolase (UCH) | Ubiquitin carboxyl-terminal hydrolase | - | Family |
OA [auth Y] | PF21154 | 26S proteasome regulatory subunit RPN7/PSMD6 C-terminal helix (RPN7_PSMD6_C) | 26S proteasome regulatory subunit RPN7/PSMD6 C-terminal helix | RPN7/PSDM6 are regulatory subunits from the 26S proteasome. This entry represents the C-terminal helix. | Domain |
OA [auth Y] | PF00240 | Ubiquitin family (ubiquitin) | Ubiquitin family | This family contains a number of ubiquitin-like proteins: SUMO (smt3 homologue) (see Swiss:Q02724), Nedd8 (see Swiss:P29595), Elongin B (see Swiss:Q15370), Rub1 (see Swiss:Q9SHE7), and Parkin (see Swiss:O60260). A number of them are thought to carry ... | Domain |
OA [auth Y] | PF01399 | PCI domain (PCI) | PCI domain | This domain has also been called the PINT motif (Proteasome, Int-6, Nip-1 and TRIP-15) [1]. | Domain |
OA [auth Y] | PF10602 | 26S proteasome subunit RPN7 (RPN7) | 26S proteasome subunit RPN7 | - | Repeat |
PA [auth Z] | PF13012 | Maintenance of mitochondrial structure and function (MitMem_reg) | Maintenance of mitochondrial structure and function | - | Family |