CryoEM structure of football-shaped GroEL:ES2 with RuBisCO
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| Z [auth X] | SCOP2B Superfamily | GroES-like | 8002348 | 3000002 | SCOP2B (2022-06-29) |
| Y [auth W] | SCOP2B Superfamily | GroES-like | 8002348 | 3000002 | SCOP2B (2022-06-29) |
| X [auth V] | SCOP2B Superfamily | GroES-like | 8002348 | 3000002 | SCOP2B (2022-06-29) |
| W [auth U] | SCOP2B Superfamily | GroES-like | 8002348 | 3000002 | SCOP2B (2022-06-29) |
| V [auth T] | SCOP2B Superfamily | GroES-like | 8002348 | 3000002 | SCOP2B (2022-06-29) |
| U [auth S] | SCOP2B Superfamily | GroES-like | 8002348 | 3000002 | SCOP2B (2022-06-29) |
| T [auth R] | SCOP2B Superfamily | GroES-like | 8002348 | 3000002 | SCOP2B (2022-06-29) |
| S [auth Q] | SCOP2B Superfamily | GroES-like | 8002348 | 3000002 | SCOP2B (2022-06-29) |
| R [auth P] | SCOP2B Superfamily | GroES-like | 8002348 | 3000002 | SCOP2B (2022-06-29) |
| Q [auth O] | SCOP2B Superfamily | GroES-like | 8002348 | 3000002 | SCOP2B (2022-06-29) |
| BA [auth Z] | SCOP2B Superfamily | GroES-like | 8002348 | 3000002 | SCOP2B (2022-06-29) |
| B [auth 2] | SCOP2B Superfamily | GroES-like | 8002348 | 3000002 | SCOP2B (2022-06-29) |
| AA [auth Y] | SCOP2B Superfamily | GroES-like | 8002348 | 3000002 | SCOP2B (2022-06-29) |
| A [auth 1] | SCOP2B Superfamily | GroES-like | 8002348 | 3000002 | SCOP2B (2022-06-29) |
| P [auth N] | SCOP2B Superfamily | GroEL-intermediate domain like | 8032390 | 3001087 | SCOP2B (2022-06-29) |
| P [auth N] | SCOP2B Superfamily | GroEL equatorial domain-like | 8032389 | 3001651 | SCOP2B (2022-06-29) |
| P [auth N] | SCOP2B Superfamily | GroEL-intermediate domain like | 8032390 | 3001087 | SCOP2B (2022-06-29) |
| P [auth N] | SCOP2B Superfamily | GroEL apical domain-like | 8043929 | 3000963 | SCOP2B (2022-06-29) |
| P [auth N] | SCOP2B Superfamily | GroEL equatorial domain-like | 8032389 | 3001651 | SCOP2B (2022-06-29) |
| O [auth M] | SCOP2B Superfamily | GroEL-intermediate domain like | 8032390 | 3001087 | SCOP2B (2022-06-29) |
| O [auth M] | SCOP2B Superfamily | GroEL equatorial domain-like | 8032389 | 3001651 | SCOP2B (2022-06-29) |
| O [auth M] | SCOP2B Superfamily | GroEL equatorial domain-like | 8032389 | 3001651 | SCOP2B (2022-06-29) |
| O [auth M] | SCOP2B Superfamily | GroEL-intermediate domain like | 8032390 | 3001087 | SCOP2B (2022-06-29) |
| O [auth M] | SCOP2B Superfamily | GroEL apical domain-like | 8043929 | 3000963 | SCOP2B (2022-06-29) |
| N [auth L] | SCOP2B Superfamily | GroEL-intermediate domain like | 8032390 | 3001087 | SCOP2B (2022-06-29) |
| N [auth L] | SCOP2B Superfamily | GroEL equatorial domain-like | 8032389 | 3001651 | SCOP2B (2022-06-29) |
| N [auth L] | SCOP2B Superfamily | GroEL-intermediate domain like | 8032390 | 3001087 | SCOP2B (2022-06-29) |
| N [auth L] | SCOP2B Superfamily | GroEL equatorial domain-like | 8032389 | 3001651 | SCOP2B (2022-06-29) |
| N [auth L] | SCOP2B Superfamily | GroEL apical domain-like | 8043929 | 3000963 | SCOP2B (2022-06-29) |
| M [auth K] | SCOP2B Superfamily | GroEL-intermediate domain like | 8032390 | 3001087 | SCOP2B (2022-06-29) |
| M [auth K] | SCOP2B Superfamily | GroEL apical domain-like | 8043929 | 3000963 | SCOP2B (2022-06-29) |
| M [auth K] | SCOP2B Superfamily | GroEL equatorial domain-like | 8032389 | 3001651 | SCOP2B (2022-06-29) |
| M [auth K] | SCOP2B Superfamily | GroEL equatorial domain-like | 8032389 | 3001651 | SCOP2B (2022-06-29) |
| M [auth K] | SCOP2B Superfamily | GroEL-intermediate domain like | 8032390 | 3001087 | SCOP2B (2022-06-29) |
| L [auth J] | SCOP2B Superfamily | GroEL equatorial domain-like | 8032389 | 3001651 | SCOP2B (2022-06-29) |
| L [auth J] | SCOP2B Superfamily | GroEL-intermediate domain like | 8032390 | 3001087 | SCOP2B (2022-06-29) |
| L [auth J] | SCOP2B Superfamily | GroEL apical domain-like | 8043929 | 3000963 | SCOP2B (2022-06-29) |
| L [auth J] | SCOP2B Superfamily | GroEL equatorial domain-like | 8032389 | 3001651 | SCOP2B (2022-06-29) |
| L [auth J] | SCOP2B Superfamily | GroEL-intermediate domain like | 8032390 | 3001087 | SCOP2B (2022-06-29) |
| K [auth I] | SCOP2B Superfamily | GroEL equatorial domain-like | 8032389 | 3001651 | SCOP2B (2022-06-29) |
| K [auth I] | SCOP2B Superfamily | GroEL-intermediate domain like | 8032390 | 3001087 | SCOP2B (2022-06-29) |
| K [auth I] | SCOP2B Superfamily | GroEL-intermediate domain like | 8032390 | 3001087 | SCOP2B (2022-06-29) |
| K [auth I] | SCOP2B Superfamily | GroEL equatorial domain-like | 8032389 | 3001651 | SCOP2B (2022-06-29) |
| K [auth I] | SCOP2B Superfamily | GroEL apical domain-like | 8043929 | 3000963 | SCOP2B (2022-06-29) |
| J [auth H] | SCOP2B Superfamily | GroEL apical domain-like | 8043929 | 3000963 | SCOP2B (2022-06-29) |
| J [auth H] | SCOP2B Superfamily | GroEL-intermediate domain like | 8032390 | 3001087 | SCOP2B (2022-06-29) |
| J [auth H] | SCOP2B Superfamily | GroEL-intermediate domain like | 8032390 | 3001087 | SCOP2B (2022-06-29) |
| J [auth H] | SCOP2B Superfamily | GroEL equatorial domain-like | 8032389 | 3001651 | SCOP2B (2022-06-29) |
| J [auth H] | SCOP2B Superfamily | GroEL equatorial domain-like | 8032389 | 3001651 | SCOP2B (2022-06-29) |
| I [auth G] | SCOP2B Superfamily | GroEL equatorial domain-like | 8032389 | 3001651 | SCOP2B (2022-06-29) |
| I [auth G] | SCOP2B Superfamily | GroEL-intermediate domain like | 8032390 | 3001087 | SCOP2B (2022-06-29) |
| I [auth G] | SCOP2B Superfamily | GroEL equatorial domain-like | 8032389 | 3001651 | SCOP2B (2022-06-29) |
| I [auth G] | SCOP2B Superfamily | GroEL-intermediate domain like | 8032390 | 3001087 | SCOP2B (2022-06-29) |
| I [auth G] | SCOP2B Superfamily | GroEL apical domain-like | 8043929 | 3000963 | SCOP2B (2022-06-29) |
| H [auth F] | SCOP2B Superfamily | GroEL equatorial domain-like | 8032389 | 3001651 | SCOP2B (2022-06-29) |
| H [auth F] | SCOP2B Superfamily | GroEL-intermediate domain like | 8032390 | 3001087 | SCOP2B (2022-06-29) |
| H [auth F] | SCOP2B Superfamily | GroEL apical domain-like | 8043929 | 3000963 | SCOP2B (2022-06-29) |
| H [auth F] | SCOP2B Superfamily | GroEL equatorial domain-like | 8032389 | 3001651 | SCOP2B (2022-06-29) |
| H [auth F] | SCOP2B Superfamily | GroEL-intermediate domain like | 8032390 | 3001087 | SCOP2B (2022-06-29) |
| G [auth E] | SCOP2B Superfamily | GroEL equatorial domain-like | 8032389 | 3001651 | SCOP2B (2022-06-29) |
| G [auth E] | SCOP2B Superfamily | GroEL apical domain-like | 8043929 | 3000963 | SCOP2B (2022-06-29) |
| G [auth E] | SCOP2B Superfamily | GroEL-intermediate domain like | 8032390 | 3001087 | SCOP2B (2022-06-29) |
| G [auth E] | SCOP2B Superfamily | GroEL-intermediate domain like | 8032390 | 3001087 | SCOP2B (2022-06-29) |
| G [auth E] | SCOP2B Superfamily | GroEL equatorial domain-like | 8032389 | 3001651 | SCOP2B (2022-06-29) |
| F [auth D] | SCOP2B Superfamily | GroEL-intermediate domain like | 8032390 | 3001087 | SCOP2B (2022-06-29) |
| F [auth D] | SCOP2B Superfamily | GroEL equatorial domain-like | 8032389 | 3001651 | SCOP2B (2022-06-29) |
| F [auth D] | SCOP2B Superfamily | GroEL apical domain-like | 8043929 | 3000963 | SCOP2B (2022-06-29) |
| F [auth D] | SCOP2B Superfamily | GroEL equatorial domain-like | 8032389 | 3001651 | SCOP2B (2022-06-29) |
| F [auth D] | SCOP2B Superfamily | GroEL-intermediate domain like | 8032390 | 3001087 | SCOP2B (2022-06-29) |
| E [auth C] | SCOP2B Superfamily | GroEL equatorial domain-like | 8032389 | 3001651 | SCOP2B (2022-06-29) |
| E [auth C] | SCOP2B Superfamily | GroEL-intermediate domain like | 8032390 | 3001087 | SCOP2B (2022-06-29) |
| E [auth C] | SCOP2B Superfamily | GroEL-intermediate domain like | 8032390 | 3001087 | SCOP2B (2022-06-29) |
| E [auth C] | SCOP2B Superfamily | GroEL apical domain-like | 8043929 | 3000963 | SCOP2B (2022-06-29) |
| E [auth C] | SCOP2B Superfamily | GroEL equatorial domain-like | 8032389 | 3001651 | SCOP2B (2022-06-29) |
| D [auth B] | SCOP2B Superfamily | GroEL apical domain-like | 8043929 | 3000963 | SCOP2B (2022-06-29) |
| D [auth B] | SCOP2B Superfamily | GroEL equatorial domain-like | 8032389 | 3001651 | SCOP2B (2022-06-29) |
| D [auth B] | SCOP2B Superfamily | GroEL-intermediate domain like | 8032390 | 3001087 | SCOP2B (2022-06-29) |
| D [auth B] | SCOP2B Superfamily | GroEL equatorial domain-like | 8032389 | 3001651 | SCOP2B (2022-06-29) |
| D [auth B] | SCOP2B Superfamily | GroEL-intermediate domain like | 8032390 | 3001087 | SCOP2B (2022-06-29) |
| C [auth A] | SCOP2B Superfamily | GroEL equatorial domain-like | 8032389 | 3001651 | SCOP2B (2022-06-29) |
| C [auth A] | SCOP2B Superfamily | GroEL-intermediate domain like | 8032390 | 3001087 | SCOP2B (2022-06-29) |
| C [auth A] | SCOP2B Superfamily | GroEL apical domain-like | 8043929 | 3000963 | SCOP2B (2022-06-29) |
| C [auth A] | SCOP2B Superfamily | GroEL-intermediate domain like | 8032390 | 3001087 | SCOP2B (2022-06-29) |
| C [auth A] | SCOP2B Superfamily | GroEL equatorial domain-like | 8032389 | 3001651 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| Z [auth X] | Sybindin | e7vwxX1 | A: a/b three-layered sandwiches | X: RNase A-like | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Sybindin | ECOD (v294.1) |
| Y [auth W] | Sybindin | e7vwxW1 | A: a/b three-layered sandwiches | X: RNase A-like | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Sybindin | ECOD (v294.1) |
| X [auth V] | Sybindin | e7vwxV1 | A: a/b three-layered sandwiches | X: RNase A-like | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Sybindin | ECOD (v294.1) |
| W [auth U] | Sybindin | e7vwxU1 | A: a/b three-layered sandwiches | X: RNase A-like | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Sybindin | ECOD (v294.1) |
| V [auth T] | Sybindin | e7vwxT1 | A: a/b three-layered sandwiches | X: RNase A-like | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Sybindin | ECOD (v294.1) |
| U [auth S] | Sybindin | e7vwxS1 | A: a/b three-layered sandwiches | X: RNase A-like | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Sybindin | ECOD (v294.1) |
| T [auth R] | Sybindin | e7vwxR1 | A: a/b three-layered sandwiches | X: RNase A-like | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Sybindin | ECOD (v294.1) |
| S [auth Q] | Sybindin | e7vwxQ1 | A: a/b three-layered sandwiches | X: RNase A-like | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Sybindin | ECOD (v294.1) |
| R [auth P] | Sybindin | e7vwxP1 | A: a/b three-layered sandwiches | X: RNase A-like | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Sybindin | ECOD (v294.1) |
| Q [auth O] | Sybindin | e7vwxO1 | A: a/b three-layered sandwiches | X: RNase A-like | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Sybindin | ECOD (v294.1) |
| BA [auth Z] | Sybindin | e7vwxZ1 | A: a/b three-layered sandwiches | X: RNase A-like | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Sybindin | ECOD (v294.1) |
| B [auth 2] | Sybindin | e7vwx21 | A: a/b three-layered sandwiches | X: RNase A-like | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Sybindin | ECOD (v294.1) |
| AA [auth Y] | Sybindin | e7vwxY1 | A: a/b three-layered sandwiches | X: RNase A-like | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Sybindin | ECOD (v294.1) |
| A [auth 1] | Peptidase_S28 | e7vwx11 | A: a/b three-layered sandwiches | X: RNase A-like | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Peptidase_S28 | ECOD (v294.1) |
| P [auth N] | Sybindin | e7vwxN1 | A: a/b three-layered sandwiches | X: RNase A-like | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Sybindin | ECOD (v294.1) |
| O [auth M] | Sybindin | e7vwxM1 | A: a/b three-layered sandwiches | X: RNase A-like | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Sybindin | ECOD (v294.1) |
| N [auth L] | Sybindin | e7vwxL1 | A: a/b three-layered sandwiches | X: RNase A-like | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Sybindin | ECOD (v294.1) |
| M [auth K] | Sybindin | e7vwxK1 | A: a/b three-layered sandwiches | X: RNase A-like | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Sybindin | ECOD (v294.1) |
| L [auth J] | Sybindin | e7vwxJ1 | A: a/b three-layered sandwiches | X: RNase A-like | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Sybindin | ECOD (v294.1) |
| K [auth I] | Sybindin | e7vwxI1 | A: a/b three-layered sandwiches | X: RNase A-like | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Sybindin | ECOD (v294.1) |
| J [auth H] | Sybindin | e7vwxH1 | A: a/b three-layered sandwiches | X: RNase A-like | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Sybindin | ECOD (v294.1) |
| I [auth G] | Sybindin | e7vwxG1 | A: a/b three-layered sandwiches | X: RNase A-like | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Sybindin | ECOD (v294.1) |
| H [auth F] | Sybindin | e7vwxF1 | A: a/b three-layered sandwiches | X: RNase A-like | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Sybindin | ECOD (v294.1) |
| G [auth E] | Sybindin | e7vwxE1 | A: a/b three-layered sandwiches | X: RNase A-like | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Sybindin | ECOD (v294.1) |
| F [auth D] | Sybindin | e7vwxD1 | A: a/b three-layered sandwiches | X: RNase A-like | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Sybindin | ECOD (v294.1) |
| E [auth C] | Sybindin | e7vwxC1 | A: a/b three-layered sandwiches | X: RNase A-like | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Sybindin | ECOD (v294.1) |
| D [auth B] | Sybindin | e7vwxB1 | A: a/b three-layered sandwiches | X: RNase A-like | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Sybindin | ECOD (v294.1) |
| C [auth A] | Peptidase_S28 | e7vwxA1 | A: a/b three-layered sandwiches | X: RNase A-like | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Peptidase_S28 | ECOD (v294.1) |
| CA [auth a] | Peptidase_S28 | e7vwxa1 | A: a/b three-layered sandwiches | X: RNase A-like | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Peptidase_S28 | ECOD (v294.1) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF00166 | Chaperonin 10 Kd subunit (Cpn10) | Chaperonin 10 Kd subunit | This family contains GroES and Gp31-like chaperonins. Gp31 is a functional co-chaperonin that is required for the folding and assembly of Gp23, a major capsid protein, during phage morphogenesis [1]. | Domain | |
| PF00118 | TCP-1/cpn60 chaperonin family (Cpn60_TCP1) | TCP-1/cpn60 chaperonin family | - | Family | |
| PF02788 | Ribulose bisphosphate carboxylase large chain, N-terminal domain (RuBisCO_large_N) | Ribulose bisphosphate carboxylase large chain, N-terminal domain | The N-terminal domain of RuBisCO large chain adopts a ferredoxin-like fold. | Domain | |
| PF00016 | Ribulose bisphosphate carboxylase large chain, catalytic domain (RuBisCO_large) | Ribulose bisphosphate carboxylase large chain, catalytic domain | The C-terminal domain of RuBisCO large chain is the catalytic domain adopting a TIM barrel fold. | Domain | |














