7VUQ
Structure of NF-kB p52 homodimer bound to A/T-centric P-Selectin kB DNA fragment
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A [auth B] | SCOP2B Superfamily | E set domains | 8054871 | 3000070 | SCOP2B (2022-06-29) |
A [auth B] | SCOP2B Superfamily | p53-like transcription factors | 8040231 | 3000758 | SCOP2B (2022-06-29) |
C [auth A] | SCOP2B Superfamily | E set domains | 8054871 | 3000070 | SCOP2B (2022-06-29) |
C [auth A] | SCOP2B Superfamily | p53-like transcription factors | 8040231 | 3000758 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth B] | PF16179 | e7vuqB2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF16179 | ECOD (1.6) |
A [auth B] | PF00554 | e7vuqB1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Common fold of diphtheria toxin/transcription factors/cytochrome f | F: PF00554 | ECOD (1.6) |
C [auth A] | PF16179 | e7vuqA2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF16179 | ECOD (1.6) |
C [auth A] | PF00554 | e7vuqA1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Common fold of diphtheria toxin/transcription factors/cytochrome f | F: PF00554 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth B], C [auth A] | PF16179 | Rel homology dimerisation domain (RHD_dimer) | Rel homology dimerisation domain | The Rel homology domain (RHD) is composed of two structural domains, an N-terminal DNA_binding domain (Pfam:PF00554) and a C-terminal dimerisation domain. This is the dimerisation domain [1]. | Domain |
A [auth B], C [auth A] | PF00554 | Rel homology DNA-binding domain (RHD_DNA_bind) | Rel homology DNA-binding domain | Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immu ... | Domain |