7VRU

Crystal structure of PacII_M1M2S-DNA-SAH complex

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
B [auth C]PF01420e7vruC1 A: a+b complex topologyX: DNA methylase specificity domain (From Topology)H: DNA methylase specificity domain (From Topology)T: DNA methylase specificity domainF: PF01420ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A [auth B]PF02384N-6 DNA Methylase (N6_Mtase)N-6 DNA Methylase- Family
A [auth B]PF12161HsdM N-terminal domain (HsdM_N)HsdM N-terminal domainThis domain is found at the N-terminus of the methylase subunit of Type I DNA methyltransferases. This domain family is found in bacteria and archaea, and is typically between 123 and 138 amino acids in length. The family is found in association with ...This domain is found at the N-terminus of the methylase subunit of Type I DNA methyltransferases. This domain family is found in bacteria and archaea, and is typically between 123 and 138 amino acids in length. The family is found in association with Pfam:PF02384. Mutations in this region of EcoKI methyltransferase Swiss:P08957 abolish the normally strong preference of this system for methylating hemimethylated substrate [1]. The structure of this domain has been shown to be all alpha-helical.
Domain
E [auth A]PF02384N-6 DNA Methylase (N6_Mtase)N-6 DNA Methylase- Family
E [auth A]PF12161HsdM N-terminal domain (HsdM_N)HsdM N-terminal domainThis domain is found at the N-terminus of the methylase subunit of Type I DNA methyltransferases. This domain family is found in bacteria and archaea, and is typically between 123 and 138 amino acids in length. The family is found in association with ...This domain is found at the N-terminus of the methylase subunit of Type I DNA methyltransferases. This domain family is found in bacteria and archaea, and is typically between 123 and 138 amino acids in length. The family is found in association with Pfam:PF02384. Mutations in this region of EcoKI methyltransferase Swiss:P08957 abolish the normally strong preference of this system for methylating hemimethylated substrate [1]. The structure of this domain has been shown to be all alpha-helical.
Domain