7UPH

Structure of a ribosome with tethered subunits


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain)8052568 3000068 SCOP2B (2021-05-27)
KSCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8035393 3000334 SCOP2B (2021-05-27)
KSCOP2B SuperfamilyNucleic acid-binding proteins8035394 3000135 SCOP2B (2021-05-27)
LSCOP2B SuperfamilyTranslational proteins8032955 3000811 SCOP2B (2021-05-27)
MSCOP2B SuperfamilyRibosomal protein L48096356 3001146 SCOP2B (2021-05-27)
NSCOP2B SuperfamilyRL5-like8096352 3001709 SCOP2B (2021-05-27)
OSCOP2B SuperfamilyRibosomal protein L68035397 3000724 SCOP2B (2021-05-27)
OSCOP2B SuperfamilyRibosomal protein L68035398 3000724 SCOP2B (2021-05-27)
P [auth R]SCOP2B SuperfamilyRibosomal protein L138096350 3001134 SCOP2B (2021-05-27)
Q [auth S]SCOP2B Superfamily50S Ribosomal protein L14-like8098412 3000433 SCOP2B (2021-05-27)
R [auth T]SCOP2B SuperfamilyRibosomal proteins L15p and L18e8070553 3001045 SCOP2B (2021-05-27)
S [auth U]SCOP2B SuperfamilyRibosomal protein L16p/L10e8096366 3000884 SCOP2B (2021-05-27)
BSCOP2B SuperfamilyS15/NS1 RNA-binding domain8032375 3001284 SCOP2B (2021-05-27)
T [auth V]SCOP2B SuperfamilyProkaryotic ribosomal protein L178035409 3000995 SCOP2B (2021-05-27)
U [auth W]SCOP2B SuperfamilySIS domain/Ribosomal protein S2-like8063838 3001397 SCOP2B (2021-05-27)
W [auth Y]SCOP2B SuperfamilyAlpha-L RNA-binding motif8083400 3001473 SCOP2B (2021-05-27)
Y [auth a]SCOP2B SuperfamilyRibosomal protein S68066495 3001323 SCOP2B (2021-05-27)
Z [auth b]SCOP2B SuperfamilyRibosomal protein S78077979 3000799 SCOP2B (2021-05-27)
AA [auth c]SCOP2B SuperfamilyRibosomal protein S88079059 3000709 SCOP2B (2021-05-27)
BA [auth d]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like8082661 3000100 SCOP2B (2021-05-27)
CA [auth e]SCOP2B SuperfamilyRibosomal protein S108102681 3001336 SCOP2B (2021-05-27)
CSCOP2B SuperfamilyRibosomal protein S168066563 3000680 SCOP2B (2021-05-27)
DA [auth f]SCOP2B SuperfamilyTranslational machinery components8035368 3000571 SCOP2B (2021-05-27)
EA [auth g]SCOP2B SuperfamilyNucleic acid-binding proteins8094649 3000135 SCOP2B (2021-05-27)
FA [auth h]SCOP2B SuperfamilyS13-like H2TH domain8098358 3000053 SCOP2B (2021-05-27)
GA [auth i]SCOP2B SuperfamilyZn-binding ribosomal proteins8096380 3001320 SCOP2B (2021-05-27)
HA [auth j]SCOP2B SuperfamilyZn-binding ribosomal proteins8096362 3001320 SCOP2B (2021-05-27)
JA [auth l]SCOP2B SuperfamilyL35p-like8035388 3000790 SCOP2B (2021-05-27)
KA [auth m]SCOP2B SuperfamilyRibosomal protein L368035391 3001346 SCOP2B (2021-05-27)
LA [auth n]SCOP2B SuperfamilyTranslational machinery components8032969 3000571 SCOP2B (2021-05-27)
MA [auth o]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8096364 3000334 SCOP2B (2021-05-27)
DSCOP2B SuperfamilyNucleic acid-binding proteins8059276 3000135 SCOP2B (2021-05-27)
NA [auth p]SCOP2B SuperfamilyRibosomal protein L208096382 3000563 SCOP2B (2021-05-27)
OA [auth q]SCOP2B Superfamilyl21p-like8096354 3002005 SCOP2B (2021-05-27)
PA [auth r]SCOP2B SuperfamilyRibosomal protein L228096336 3001078 SCOP2B (2021-05-27)
QA [auth s]SCOP2B SuperfamilyRibosomal proteins S24e L23 and L15e8035415 3000210 SCOP2B (2021-05-27)
RA [auth t]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8096358 3000334 SCOP2B (2021-05-27)
SA [auth u]SCOP2B SuperfamilyRibosomal protein L25-like8042538 3001161 SCOP2B (2021-05-27)
TA [auth v]SCOP2B SuperfamilyRibosomal L27 protein-like8096338 3000539 SCOP2B (2021-05-27)
UA [auth w]SCOP2B SuperfamilyL28p-like8035424 3001966 SCOP2B (2021-05-27)
VA [auth x]SCOP2B SuperfamilyRibosomal protein L29 (L29p)8096370 3000713 SCOP2B (2021-05-27)
WA [auth y]SCOP2B SuperfamilyRibosomal protein L30p/L7e8096372 3001378 SCOP2B (2021-05-27)
HSCOP2B SuperfamilyRibosomal protein S218053090 3002159 SCOP2B (2021-05-27)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF00253e7uphA1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: PF00253ECOD (1.6)
KPF00181e7uphK1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00181ECOD (1.6)
KPF03947e7uphK2 A: beta barrelsX: SH3H: SH3T: SH3F: PF03947ECOD (1.6)
LPF00297e7uphL1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PF00297ECOD (1.6)
MPF00573e7uphM1 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: PF00573ECOD (1.6)
NPF00281,PF00673e7uphN1 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: PF00281,PF00673ECOD (1.6)
OPF00347e7uphO1 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: PF00347ECOD (1.6)
P [auth R]PF00572e7uphR1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: PF00572ECOD (1.6)
Q [auth S]PF00238e7uphS1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: PF00238ECOD (1.6)
R [auth T]PF00828e7uphT1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: PF00828ECOD (1.6)
S [auth U]PF00252e7uphU1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: PF00252ECOD (1.6)
BPF00312e7uphB1 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: PF00312ECOD (1.6)
T [auth V]PF01196e7uphV1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Prokaryotic ribosomal protein L17 (From Topology)T: Prokaryotic ribosomal protein L17F: PF01196ECOD (1.6)
U [auth W]PF00318e7uphW1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: PF00318ECOD (1.6)
V [auth X]PF00189e7uphX1 A: a+b two layersX: T-foldH: Ribosomal protein S3-C (From Topology)T: Ribosomal protein S3-CF: PF00189ECOD (1.6)
V [auth X]PF07650e7uphX2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: PF07650ECOD (1.6)
W [auth Y]PF00163,PF01479e7uphY1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: PF00163,PF01479ECOD (1.6)
X [auth Z]PF03719e7uphZ2 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: PF03719ECOD (1.6)
X [auth Z]PF00333e7uphZ1 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: PF00333ECOD (1.6)
Y [auth a]PF01250e7upha1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S6 (From Topology)T: Ribosomal protein S6F: PF01250ECOD (1.6)
Z [auth b]PF00177e7uphb1 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: PF00177ECOD (1.6)
AA [auth c]PF00410e7uphc1 A: a+b two layersX: R3H domain-likeH: Ribosomal protein S8, N-terminal domain (From Topology)T: Ribosomal protein S8, N-terminal domainF: PF00410ECOD (1.6)
AA [auth c]PF00410e7uphc2 A: a+b two layersX: Ribosomal protein S8, C-terminal domain (From Topology)H: Ribosomal protein S8, C-terminal domain (From Topology)T: Ribosomal protein S8, C-terminal domainF: PF00410ECOD (1.6)
BA [auth d]PF00380e7uphd1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: PF00380ECOD (1.6)
CA [auth e]PF00338e7uphe1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: PF00338ECOD (1.6)
CPF00886e7uphC1 A: a+b two layersX: Ribosomal protein S16 (From Topology)H: Ribosomal protein S16 (From Topology)T: Ribosomal protein S16F: PF00886ECOD (1.6)
DA [auth f]PF00411e7uphf1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF00411ECOD (1.6)
EA [auth g]PF00164e7uphg1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00164ECOD (1.6)
FA [auth h]PF00416e7uphh1 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: PF00416ECOD (1.6)
GA [auth i]PF01783e7uphi1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01783ECOD (1.6)
HA [auth j]PF00471e7uphj1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF00471ECOD (1.6)
IA [auth k]PF00468e7uphk1 A: extended segmentsX: 50S ribosomal protein L34 (From Topology)H: 50S ribosomal protein L34 (From Topology)T: 50S ribosomal protein L34F: PF00468ECOD (1.6)
JA [auth l]PF01632e7uphl1 A: a+b two layersX: Ribosomal protein L35p (From Topology)H: Ribosomal protein L35p (From Topology)T: Ribosomal protein L35pF: PF01632ECOD (1.6)
KA [auth m]PF00444e7uphm1 A: few secondary structure elementsX: Ribosomal protein L36 (From Topology)H: Ribosomal protein L36 (From Topology)T: Ribosomal protein L36F: PF00444ECOD (1.6)
LA [auth n]PF00861e7uphn1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF00861ECOD (1.6)
MA [auth o]PF01245e7upho1 A: beta barrelsX: SH3H: SH3T: SH3F: PF01245ECOD (1.6)
DPF00366e7uphD1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00366ECOD (1.6)
NA [auth p]PF00453e7uphp1 A: alpha arraysX: PABP domain-likeH: Ribosomal protein L20 (From Topology)T: Ribosomal protein L20F: PF00453ECOD (1.6)
OA [auth q]PF00829e7uphq1 A: beta barrelsX: Ribosomal protein L21p (From Topology)H: Ribosomal protein L21p (From Topology)T: Ribosomal protein L21pF: PF00829ECOD (1.6)
PA [auth r]PF00237e7uphr1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: PF00237ECOD (1.6)
QA [auth s]PF00276e7uphs1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: PF00276ECOD (1.6)
RA [auth t]PF00467,PF17136e7upht1 A: beta barrelsX: SH3H: SH3T: SH3F: PF00467,PF17136ECOD (1.6)
SA [auth u]PF01386e7uphu1 A: beta barrelsX: Ribosomal protein L25-likeH: Ribosomal protein L25-like (From Topology)T: Ribosomal protein L25-likeF: PF01386ECOD (1.6)
TA [auth v]PF01016e7uphv1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal L27 proteinF: PF01016ECOD (1.6)
UA [auth w]PF00830e7uphw1 A: few secondary structure elementsX: Ribosomal protein bL28-related (From Homology)H: Ribosomal protein bL28-relatedT: Ribosomal protein L28F: PF00830ECOD (1.6)
VA [auth x]PF00831e7uphx1 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: PF00831ECOD (1.6)
WA [auth y]PF00327e7uphy1 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: PF00327ECOD (1.6)
EPF01084e7uphE1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: PF01084ECOD (1.6)
FPF00203e7uphF1 A: a+b two layersX: Ribosomal protein S19 (From Topology)H: Ribosomal protein S19 (From Topology)T: Ribosomal protein S19F: PF00203ECOD (1.6)
GPF01649e7uphG1 A: alpha bundlesX: Spectrin repeat-likeH: Ribosomal protein S20 (From Topology)T: Ribosomal protein S20F: PF01649ECOD (1.6)
HPF01165e7uphH1 A: extended segmentsX: 30S ribosomal protein S21 (From Topology)H: 30S ribosomal protein S21 (From Topology)T: 30S ribosomal protein S21F: PF01165ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF01250Ribosomal protein S6 (Ribosomal_S6)Ribosomal protein S6- Domain
PF00253Ribosomal protein S14p/S29e (Ribosomal_S14)Ribosomal protein S14p/S29e- Family
PF00471Ribosomal protein L33 (Ribosomal_L33)Ribosomal protein L33- Family
PF00468Ribosomal protein L34 (Ribosomal_L34)Ribosomal protein L34- Family
PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domain- Domain
PF00181Ribosomal Proteins L2, RNA binding domain (Ribosomal_L2)Ribosomal Proteins L2, RNA binding domain- Domain
PF00297Ribosomal protein L3 (Ribosomal_L3)Ribosomal protein L3- Family
PF01632Ribosomal protein L35 (Ribosomal_L35p)Ribosomal protein L35- Family
PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
PF00444Ribosomal protein L36 (Ribosomal_L36)Ribosomal protein L36- Domain
PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5- Domain
PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281.Domain
PF00861Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast (Ribosomal_L18p)Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast- Family
PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6- Domain
PF01245Ribosomal protein L19 (Ribosomal_L19)Ribosomal protein L19- Family
P [auth R]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.Domain
P [auth R]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
Q [auth S]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23e- Domain
Q [auth S]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
R [auth T]PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A- Family
R [auth T]PF17136Ribosomal proteins 50S L24/mitochondrial 39S L24 (ribosomal_L24)Ribosomal proteins 50S L24/mitochondrial 39S L24- Family
R [auth T]PF00467KOW motif (KOW)KOW motif- Family
S [auth U]PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10e- Domain
S [auth U]PF01386Ribosomal L25p family (Ribosomal_L25p)Ribosomal L25p familyRibosomal protein L25 is an RNA binding protein, that binds 5S rRNA. This family includes Ctc from B. subtilis Swiss:P14194, which is induced by stress.Domain
PF00177Ribosomal protein S7p/S5e (Ribosomal_S7)Ribosomal protein S7p/S5eThis family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes.Domain
PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15- Domain
T [auth V]PF01196Ribosomal protein L17 (Ribosomal_L17)Ribosomal protein L17- Family
T [auth V]PF01016Ribosomal L27 protein (Ribosomal_L27)Ribosomal L27 protein- Family
U [auth W]PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
U [auth W]PF00830Ribosomal L28 family (Ribosomal_L28)Ribosomal L28 family- Family
V [auth X]PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
V [auth X]PF07650KH domain (KH_2)KH domain- Domain
V [auth X]PF00189Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)Ribosomal protein S3, C-terminal domainThis family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer.Domain
W [auth Y]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7.Domain
W [auth Y]PF00163Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)Ribosomal protein S4/S9 N-terminal domain- Family
W [auth Y]PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
X [auth Z]PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domain- Domain
X [auth Z]PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domain- Domain
PF00886Ribosomal protein S16 (Ribosomal_S16)Ribosomal protein S16- Family
PF00410Ribosomal protein S8 (Ribosomal_S8)Ribosomal protein S8- Domain
PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17- Domain
PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes.Domain
PF01084Ribosomal protein S18 (Ribosomal_S18)Ribosomal protein S18- Family
PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
PF00203Ribosomal protein S19 (Ribosomal_S19)Ribosomal protein S19- Domain
PF01649Ribosomal protein S20 (Ribosomal_S20p)Ribosomal protein S20- Family
PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23- Family
PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
PF01165Ribosomal protein S21 (Ribosomal_S21)Ribosomal protein S21- Family
PF01783Ribosomal L32p protein family (Ribosomal_L32p)Ribosomal L32p protein family- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
30S ribosomal protein S14
5S rRNA---
50S ribosomal protein L2
50S ribosomal protein L3
50S ribosomal protein L4
50S ribosomal protein L5
50S ribosomal protein L6
P [auth R]50S ribosomal protein L13
Q [auth S]50S ribosomal protein L14
R [auth T]50S ribosomal protein L15
S [auth U]50S ribosomal protein L16
30S ribosomal protein S15
T [auth V]50S ribosomal protein L17
U [auth W]30S ribosomal protein S2
V [auth X]30S ribosomal protein S3
W [auth Y]30S ribosomal protein S4
X [auth Z]30S ribosomal protein S5
Y [auth a]30S ribosomal protein S6
Z [auth b]30S ribosomal protein S7
AA [auth c]30S ribosomal protein S8
BA [auth d]30S ribosomal protein S9
CA [auth e]30S ribosomal protein S10
30S ribosomal protein S16
DA [auth f]30S ribosomal protein S11
EA [auth g]30S ribosomal protein S12
FA [auth h]30S ribosomal protein S13
GA [auth i]50S ribosomal protein L32
HA [auth j]50S ribosomal protein L33
IA [auth k]50S ribosomal protein L34
JA [auth l]50S ribosomal protein L35
KA [auth m]50S ribosomal protein L36
LA [auth n]50S ribosomal protein L18
MA [auth o]50S ribosomal protein L19
30S ribosomal protein S17
NA [auth p]50S ribosomal protein L20
OA [auth q]50S ribosomal protein L21
PA [auth r]50S ribosomal protein L22
QA [auth s]50S ribosomal protein L23
RA [auth t]50S ribosomal protein L24
SA [auth u]50S ribosomal protein L25
TA [auth v]50S ribosomal protein L27
UA [auth w]50S ribosomal protein L28
VA [auth x]50S ribosomal protein L29
WA [auth y]50S ribosomal protein L30
30S ribosomal protein S18
30S ribosomal protein S19
30S ribosomal protein S20
30S ribosomal protein S21
Tethered rRNA---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR001209Small ribosomal subunit protein uS14Family
IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
IPR023036Small ribosomal subunit protein uS14, bacteria/plastidFamily
IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
IPR005880Large ribosomal subunit protein uL2, bacterial/organellar-typeFamily
IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
IPR002171Large ribosomal subunit protein uL2Family
IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
IPR019927Large ribosomal subunit protein uL3, bacterial/organelle-typeFamily
IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
IPR000597Large ribosomal subunit protein uL3Family
IPR013005Large ribosomal subunit protein uL4-likeFamily
IPR002136Large ribosomal subunit protein uL4Family
IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
IPR020930Large ribosomal subunit protein uL5, bacterial-typeFamily
IPR002132Large ribosomal subunit protein uL5Family
IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
IPR019906Large ribosomal subunit protein uL6, bacterial-typeFamily
IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
IPR000702Large ribosomal subunit protein uL6-likeFamily
IPR002358Large ribosomal subunit protein uL6, conserved siteConserved Site
P [auth R]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
P [auth R]IPR005822Large ribosomal subunit protein uL13Family
P [auth R]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
P [auth R]IPR005823Large ribosomal subunit protein uL13, bacterial-typeFamily
Q [auth S]IPR005745Large ribosomal subunit protein uL14, bacterial-typeFamily
Q [auth S]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
Q [auth S]IPR000218Large ribosomal subunit protein uL14Family
Q [auth S]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
R [auth T]IPR005749Large ribosomal subunit protein uL15, bacterial-typeFamily
R [auth T]IPR021131Large ribosomal subunit protein uL15/eL18Domain
R [auth T]IPR030878Large ribosomal subunit protein uL15Family
R [auth T]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
R [auth T]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
S [auth U]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
S [auth U]IPR020798Large ribosomal subunit protein uL16, conserved siteConserved Site
S [auth U]IPR000114Large ribosomal subunit protein uL16, bacterial-typeFamily
S [auth U]IPR016180Large ribosomal subunit protein uL16 domainDomain
S [auth U]IPR047873Large ribosomal subunit protein uL16Family
IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
IPR000589Small ribosomal subunit protein uS15Family
IPR005290Small ribosomal subunit protein uS15, bacterial-typeFamily
T [auth V]IPR036373Large ribosomal subunit protein bL17 superfamilyHomologous Superfamily
T [auth V]IPR047859Large ribosomal subunit protein bL17, conserved siteConserved Site
T [auth V]IPR000456Large ribosomal subunit protein bL17Family
U [auth W]IPR005706Small ribosomal subunit protein uS2, bacteria/mitochondria/plastidFamily
U [auth W]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
U [auth W]IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
U [auth W]IPR001865Small ribosomal subunit protein uS2Family
V [auth X]IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
V [auth X]IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
V [auth X]IPR004087K Homology domainDomain
V [auth X]IPR004044K Homology domain, type 2Domain
V [auth X]IPR015946K homology domain-like, alpha/betaHomologous Superfamily
V [auth X]IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
V [auth X]IPR005704Small ribosomal subunit protein uS3, bacterial-typeFamily
V [auth X]IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site
W [auth Y]IPR002942RNA-binding S4 domainDomain
W [auth Y]IPR005709Small ribosomal subunit protein uS4, bacterial-typeFamily
W [auth Y]IPR022801Small ribosomal subunit protein uS4Family
W [auth Y]IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
W [auth Y]IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
W [auth Y]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
X [auth Z]IPR000851Small ribosomal subunit protein uS5Family
X [auth Z]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
X [auth Z]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
X [auth Z]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
X [auth Z]IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
X [auth Z]IPR005712Small ribosomal subunit protein uS5, bacterial-typeFamily
X [auth Z]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
Y [auth a]IPR020815Small ribosomal subunit protein bS6, conserved siteConserved Site
Y [auth a]IPR000529Small ribosomal subunit protein bS6Family
Y [auth a]IPR020814Small ribosomal subunit protein bS6, plastid/chloroplastFamily
Y [auth a]IPR035980Small ribosomal subunit protein bS6 superfamilyHomologous Superfamily
Y [auth a]IPR014717Translation elongation factor EF1B/small ribosomal subunit protein bS6Homologous Superfamily
Z [auth b]IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
Z [auth b]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
Z [auth b]IPR000235Small ribosomal subunit protein uS7Family
Z [auth b]IPR005717Small ribosomal subunit protein uS7, bacterial/organellar-typeFamily
Z [auth b]IPR023798Small ribosomal subunit protein uS7 domainDomain
AA [auth c]IPR000630Small ribosomal subunit protein uS8Family
AA [auth c]IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
AA [auth c]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
BA [auth d]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
BA [auth d]IPR023035Small ribosomal subunit protein uS9, bacterial/plastidFamily
BA [auth d]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
BA [auth d]IPR000754Small ribosomal subunit protein uS9Family
BA [auth d]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
CA [auth e]IPR027486Small ribosomal subunit protein uS10 domainDomain
CA [auth e]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
CA [auth e]IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site
CA [auth e]IPR001848Small ribosomal subunit protein uS10Family
IPR023803Small ribosomal subunit protein bS16 domain superfamilyHomologous Superfamily
IPR000307Small ribosomal subunit protein bS16Family
IPR020592Small ribosomal subunit protein bS16, conserved siteConserved Site
DA [auth f]IPR001971Small ribosomal subunit protein uS11Family
DA [auth f]IPR019981Small ribosomal subunit protein uS11, bacterial-typeFamily
DA [auth f]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
DA [auth f]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
EA [auth g]IPR005679Ribosomal protein uS12, bacterial-typeFamily
EA [auth g]IPR006032Small ribosomal subunit protein uS12Family
EA [auth g]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
FA [auth h]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
FA [auth h]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
FA [auth h]IPR001892Small ribosomal subunit protein uS13Family
FA [auth h]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
FA [auth h]IPR019980Small ribosomal subunit protein uS13, bacterial-typeFamily
GA [auth i]IPR002677Large ribosomal subunit protein bL32Family
GA [auth i]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
GA [auth i]IPR044957Large ribosomal subunit protein bL32, bacterial typeFamily
HA [auth j]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
HA [auth j]IPR038584Large ribosomal subunit protein bL33 superfamilyHomologous Superfamily
HA [auth j]IPR001705Large ribosomal subunit protein bL33Family
HA [auth j]IPR018264Large ribosomal subunit protein bL33, conserved siteConserved Site
IA [auth k]IPR020939Large ribosomal subunit protein bL34, conserved siteConserved Site
IA [auth k]IPR000271Large ribosomal subunit protein bL34Family
JA [auth l]IPR021137Large ribosomal subunit protein bL35-likeFamily
JA [auth l]IPR018265Large ribosomal subunit protein bL35, conserved siteConserved Site
JA [auth l]IPR001706Large ribosomal subunit protein bL35Family
JA [auth l]IPR037229Large ribosomal subunit protein bL35 superfamilyHomologous Superfamily
KA [auth m]IPR000473Large ribosomal subunit protein bL36Family
KA [auth m]IPR035977Large ribosomal subunit protein bL36 superfamilyHomologous Superfamily
LA [auth n]IPR005484Large ribosomal subunit protein uL18Family
LA [auth n]IPR004389Large ribosomal subunit protein uL18, bacterial-typeFamily
MA [auth o]IPR001857Large ribosomal subunit protein bL19Family
MA [auth o]IPR038657Large ribosomal subunit protein bL19 superfamilyHomologous Superfamily
MA [auth o]IPR018257Large ribosomal subunit protein bL19, conserved siteConserved Site
MA [auth o]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
IPR019984Small ribosomal subunit protein uS17, bacteria/chloroplastFamily
IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
IPR000266Small ribosomal subunit protein uS17Family
NA [auth p]IPR035566Ribosomal protein bL20, C-terminalHomologous Superfamily
NA [auth p]IPR005813Large ribosomal subunit protein bL20Family
OA [auth q]IPR028909Large ribosomal subunit protein bL21-likeFamily
OA [auth q]IPR001787Large ribosomal subunit protein bL21Family
OA [auth q]IPR036164Large ribosomal subunit protein bL21-like superfamilyHomologous Superfamily
OA [auth q]IPR018258Large ribosomal subunit protein bL21, conserved siteConserved Site
PA [auth r]IPR047867Large ribosomal subunit protein uL22, bacterial/organelle-typeFamily
PA [auth r]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
PA [auth r]IPR001063Large ribosomal subunit protein uL22Family
PA [auth r]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
PA [auth r]IPR005727Large ribosomal subunit protein uL22, bacterial/chloroplast-typeFamily
QA [auth s]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
QA [auth s]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
QA [auth s]IPR001014Large ribosomal subunit protein uL23, conserved siteConserved Site
QA [auth s]IPR013025Large ribosomal subunit protein uL23-likeFamily
RA [auth t]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
RA [auth t]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
RA [auth t]IPR003256Large ribosomal subunit protein uL24Family
RA [auth t]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
RA [auth t]IPR005824KOWDomain
RA [auth t]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
SA [auth u]IPR020055Ribosomal protein bL25, short-formFamily
SA [auth u]IPR029751Large ribosomal subunit protein bL25, L25 domainDomain
SA [auth u]IPR020056Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminalHomologous Superfamily
SA [auth u]IPR011035Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamilyHomologous Superfamily
TA [auth v]IPR001684Large ribosomal subunit protein bL27Family
TA [auth v]IPR018261Large ribosomal subunit protein bL27, conserved siteConserved Site
UA [auth w]IPR001383Large ribosomal subunit protein bL28, bacterial-typeFamily
UA [auth w]IPR037147Large ribosomal subunit protein bL28 superfamilyHomologous Superfamily
UA [auth w]IPR026569Large ribosomal subunit protein bL28Family
UA [auth w]IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
VA [auth x]IPR001854Large ribosomal subunit protein uL29Family
VA [auth x]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
VA [auth x]IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
WA [auth y]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
WA [auth y]IPR005996Large ribosomal subunit protein uL30, bacterial-typeFamily
WA [auth y]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
WA [auth y]IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
IPR001648Small ribosomal subunit protein bS18Family
IPR018275Small ribosomal subunit protein bS18, conserved siteConserved Site
IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
IPR002222Small ribosomal subunit protein uS19Family
IPR005732Small ribosomal subunit protein uS19, bacterial-typeFamily
IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
IPR036510Small ribosomal subunit protein bS20 superfamilyHomologous Superfamily
IPR002583Small ribosomal subunit protein bS20Family
IPR038380Small ribosomal subunit protein bS21 superfamilyHomologous Superfamily
IPR018278Small ribosomal subunit protein bS21, conserved siteConserved Site
IPR001911Small ribosomal subunit protein bS21Family