7UNF

CryoEM structure of a mEAK7 bound human V-ATPase complex


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
Q [auth C]SCOP2B SuperfamilyVacuolar ATP synthase subunit C8101529 3001744 SCOP2B (2021-05-27)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
C [auth L]PF02874e7unfL2 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PF02874ECOD (1.6)
C [auth L]PF22919e7unfL3 A: alpha superhelicesX: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)H: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)T: C-terminal domain of alpha and beta subunits of F1 ATP synthaseF: PF22919ECOD (1.6)
C [auth L]PF16886e7unfL4 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Single hybrid motifF: PF16886ECOD (1.6)
C [auth L]PF00006,PF16886e7unfL1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00006,PF16886ECOD (1.6)
D [auth M]PF02874e7unfM4 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PF02874ECOD (1.6)
D [auth M]PF22919e7unfM1 A: alpha superhelicesX: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)H: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)T: C-terminal domain of alpha and beta subunits of F1 ATP synthaseF: PF22919ECOD (1.6)
D [auth M]PF16886e7unfM3 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Single hybrid motifF: PF16886ECOD (1.6)
D [auth M]PF00006,PF16886e7unfM2 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00006,PF16886ECOD (1.6)
E [auth N]PF02874e7unfN3 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PF02874ECOD (1.6)
E [auth N]PF22919e7unfN4 A: alpha superhelicesX: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)H: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)T: C-terminal domain of alpha and beta subunits of F1 ATP synthaseF: PF22919ECOD (1.6)
E [auth N]PF16886e7unfN2 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Single hybrid motifF: PF16886ECOD (1.6)
E [auth N]PF00006,PF16886e7unfN1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00006,PF16886ECOD (1.6)
I [auth D]PF01813e7unfD1 A: alpha bundlesX: V-type proton ATPase subunit D (From Topology)H: V-type proton ATPase subunit D (From Topology)T: V-type proton ATPase subunit DF: PF01813ECOD (1.6)
J [auth b]PF01991e7unfb2 A: a+b two layersX: FwdE/GAPDH domain-likeH: V-type ATPase subunit E (From Topology)T: V-type ATPase subunit EF: PF01991ECOD (1.6)
J [auth b]PF01991e7unfb1 A: extended segmentsX: Helical region in V-type proton ATPase subunit E (From Topology)H: Helical region in V-type proton ATPase subunit E (From Topology)T: Helical region in V-type proton ATPase subunit EF: PF01991ECOD (1.6)
L [auth d]PF01991e7unfd1 A: a+b two layersX: FwdE/GAPDH domain-likeH: V-type ATPase subunit E (From Topology)T: V-type ATPase subunit EF: PF01991ECOD (1.6)
L [auth d]PF01991e7unfd2 A: extended segmentsX: Helical region in V-type proton ATPase subunit E (From Topology)H: Helical region in V-type proton ATPase subunit E (From Topology)T: Helical region in V-type proton ATPase subunit EF: PF01991ECOD (1.6)
K [auth c]PF01991e7unfc1 A: a+b two layersX: FwdE/GAPDH domain-likeH: V-type ATPase subunit E (From Topology)T: V-type ATPase subunit EF: PF01991ECOD (1.6)
K [auth c]PF01991e7unfc2 A: extended segmentsX: Helical region in V-type proton ATPase subunit E (From Topology)H: Helical region in V-type proton ATPase subunit E (From Topology)T: Helical region in V-type proton ATPase subunit EF: PF01991ECOD (1.6)
M [auth e]PF03179e7unfe1 A: extended segmentsX: V-type proton ATPase subunit G (From Topology)H: V-type proton ATPase subunit G (From Topology)T: V-type proton ATPase subunit GF: PF03179ECOD (1.6)
N [auth f]PF03179e7unff1 A: extended segmentsX: V-type proton ATPase subunit G (From Topology)H: V-type proton ATPase subunit G (From Topology)T: V-type proton ATPase subunit GF: PF03179ECOD (1.6)
O [auth g]PF03179e7unfg1 A: extended segmentsX: V-type proton ATPase subunit G (From Topology)H: V-type proton ATPase subunit G (From Topology)T: V-type proton ATPase subunit GF: PF03179ECOD (1.6)
P [auth F]PF01990e7unfF1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: AtpF-like (From Topology)T: AtpF-likeF: PF01990ECOD (1.6)
Q [auth C]PF03223e7unfC3 A: alpha bundlesX: helical bundle domain in vacuolar ATP synthase subunit C (From Topology)H: helical bundle domain in vacuolar ATP synthase subunit C (From Topology)T: helical bundle domain in vacuolar ATP synthase subunit CF: PF03223ECOD (1.6)
Q [auth C]PF03223e7unfC1 A: a+b two layersX: Alpha-beta plaitsH: ferredoxin-like domain in vacuolar ATP synthase subunit C (From Topology)T: ferredoxin-like domain in vacuolar ATP synthase subunit CF: PF03223ECOD (1.6)
R [auth H]PF03224,PF11698e7unfH1 A: alpha superhelicesX: Repetitive alpha hairpinsH: ARM repeat (From Topology)T: ARM repeatF: PF03224,PF11698ECOD (1.6)
S [auth k]PF01992e7unfk2 A: alpha bundlesX: V-type ATP synthase subunit CH: V-type ATP synthase subunit C (From Topology)T: V-type ATP synthase subunit CF: PF01992ECOD (1.6)
AA [auth 2]PF00137e7unf22 A: extended segmentsX: F1F0 ATP synthase subunit C (From Topology)H: F1F0 ATP synthase subunit C (From Topology)T: F1F0 ATP synthase subunit CF: PF00137ECOD (1.6)
BA [auth 3]PF00137e7unf31 A: extended segmentsX: F1F0 ATP synthase subunit C (From Topology)H: F1F0 ATP synthase subunit C (From Topology)T: F1F0 ATP synthase subunit CF: PF00137ECOD (1.6)
DA [auth 5]PF00137e7unf51 A: extended segmentsX: F1F0 ATP synthase subunit C (From Topology)H: F1F0 ATP synthase subunit C (From Topology)T: F1F0 ATP synthase subunit CF: PF00137ECOD (1.6)
EA [auth 6]PF00137e7unf62 A: extended segmentsX: F1F0 ATP synthase subunit C (From Topology)H: F1F0 ATP synthase subunit C (From Topology)T: F1F0 ATP synthase subunit CF: PF00137ECOD (1.6)
GA [auth 0]PF00137e7unf01 A: extended segmentsX: F1F0 ATP synthase subunit C (From Topology)H: F1F0 ATP synthase subunit C (From Topology)T: F1F0 ATP synthase subunit CF: PF00137ECOD (1.6)
X [auth 8]PF00137e7unf81 A: extended segmentsX: F1F0 ATP synthase subunit C (From Topology)H: F1F0 ATP synthase subunit C (From Topology)T: F1F0 ATP synthase subunit CF: PF00137ECOD (1.6)
Y [auth 9]PF00137e7unf92 A: extended segmentsX: F1F0 ATP synthase subunit C (From Topology)H: F1F0 ATP synthase subunit C (From Topology)T: F1F0 ATP synthase subunit CF: PF00137ECOD (1.6)
CA [auth 4]PF00137e7unf41 A: extended segmentsX: F1F0 ATP synthase subunit C (From Topology)H: F1F0 ATP synthase subunit C (From Topology)T: F1F0 ATP synthase subunit CF: PF00137ECOD (1.6)
FA [auth 7]PF00137e7unf71 A: extended segmentsX: F1F0 ATP synthase subunit C (From Topology)H: F1F0 ATP synthase subunit C (From Topology)T: F1F0 ATP synthase subunit CF: PF00137ECOD (1.6)
G [auth P]PF02874e7unfP3 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PF02874ECOD (1.6)
G [auth P]PF22919e7unfP2 A: alpha superhelicesX: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)H: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)T: C-terminal domain of alpha and beta subunits of F1 ATP synthaseF: PF22919ECOD (1.6)
G [auth P]PF00006e7unfP1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00006ECOD (1.6)
H [auth Q]PF02874e7unfQ3 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PF02874ECOD (1.6)
H [auth Q]PF22919e7unfQ1 A: alpha superhelicesX: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)H: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)T: C-terminal domain of alpha and beta subunits of F1 ATP synthaseF: PF22919ECOD (1.6)
H [auth Q]PF00006e7unfQ2 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00006ECOD (1.6)
F [auth O]PF02874e7unfO2 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PF02874ECOD (1.6)
F [auth O]PF22919e7unfO1 A: alpha superhelicesX: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)H: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)T: C-terminal domain of alpha and beta subunits of F1 ATP synthaseF: PF22919ECOD (1.6)
F [auth O]PF00006e7unfO3 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00006ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
C [auth L],
D [auth M],
E [auth N]
PF05493ATP synthase subunit H (ATP_synt_H)ATP synthase subunit H- Family
C [auth L],
D [auth M],
E [auth N]
PF00006ATP synthase alpha/beta family, nucleotide-binding domain (ATP-synt_ab)ATP synthase alpha/beta family, nucleotide-binding domainThis entry includes the ATP synthase alpha and beta subunits, the ATP synthase associated with flagella and the termination factor Rho.Domain
C [auth L],
D [auth M],
E [auth N]
PF22919C-terminal domain of V and A type ATP synthase (ATP-synt_VA_C)C-terminal domain of V and A type ATP synthaseThis entry represents a small alpha helical domain found at the C-terminus of a variety of ATP synthases.Domain
C [auth L],
D [auth M],
E [auth N]
PF16886ATPsynthase alpha/beta subunit N-term extension (ATP-synt_ab_Xtn)ATPsynthase alpha/beta subunit N-term extension- Family
C [auth L],
D [auth M],
E [auth N]
PF02874ATP synthase alpha/beta family, beta-barrel domain (ATP-synt_ab_N)ATP synthase alpha/beta family, beta-barrel domainThis family includes the ATP synthase alpha and beta subunits the ATP synthase associated with flagella.Domain
I [auth D]PF01813ATP synthase subunit D (ATP-synt_D)ATP synthase subunit D- Family
I [auth D]PF01991ATP synthase (E/31 kDa) subunit (vATP-synt_E)ATP synthase (E/31 kDa) subunit- Family
P [auth F]PF03179Vacuolar (H+)-ATPase G subunit (V-ATPase_G)Vacuolar (H+)-ATPase G subunit- Coiled-coil
P [auth F]PF01990ATP synthase (F/14-kDa) subunit (ATP-synt_F)ATP synthase (F/14-kDa) subunit- Family
Q [auth C]PF03223V-ATPase subunit C (V-ATPase_C)V-ATPase subunit C- Family
Q [auth C]PF01991ATP synthase (E/31 kDa) subunit (vATP-synt_E)ATP synthase (E/31 kDa) subunit- Family
R [auth H]PF11698V-ATPase subunit H (V-ATPase_H_C)V-ATPase subunit H- Repeat
R [auth H]PF03224V-ATPase subunit H (V-ATPase_H_N)V-ATPase subunit H- Repeat
Z [auth 1]PF00137ATP synthase subunit C (ATP-synt_C)ATP synthase subunit CThis domain is found in the subunit c of ATP synthases and similar sequences from all cellular organisms. It forms two alpha-helices [1-4].Domain
PF00137ATP synthase subunit C (ATP-synt_C)ATP synthase subunit CThis domain is found in the subunit c of ATP synthases and similar sequences from all cellular organisms. It forms two alpha-helices [1-4].Domain
F [auth O],
G [auth P],
H [auth Q]
PF00006ATP synthase alpha/beta family, nucleotide-binding domain (ATP-synt_ab)ATP synthase alpha/beta family, nucleotide-binding domainThis entry includes the ATP synthase alpha and beta subunits, the ATP synthase associated with flagella and the termination factor Rho.Domain
F [auth O],
G [auth P],
H [auth Q]
PF22919C-terminal domain of V and A type ATP synthase (ATP-synt_VA_C)C-terminal domain of V and A type ATP synthaseThis entry represents a small alpha helical domain found at the C-terminus of a variety of ATP synthases.Domain
F [auth O],
G [auth P],
H [auth Q]
PF02874ATP synthase alpha/beta family, beta-barrel domain (ATP-synt_ab_N)ATP synthase alpha/beta family, beta-barrel domainThis family includes the ATP synthase alpha and beta subunits the ATP synthase associated with flagella.Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth a]V-type proton ATPase 116 kDa subunit a 4
C [auth L],
D [auth M],
E [auth N]
V-type proton ATPase catalytic subunit A
I [auth D]V-type proton ATPase subunit D
J [auth b],
K [auth c],
L [auth d]
V-type proton ATPase subunit E 1
M [auth e],
N [auth f],
O [auth g]
V-type proton ATPase subunit G 1
P [auth F]V-type proton ATPase subunit F
Q [auth C]V-type proton ATPase subunit C 1
R [auth H]V-type proton ATPase subunit H
T [auth m]V-type proton ATPase subunit e 1
U [auth n]Ribonuclease kappa
Z [auth 1]V-type proton ATPase 21 kDa proteolipid subunit
S [auth k]V-type proton ATPase subunit d 1
V [auth s]V-type proton ATPase subunit S1
W [auth r]ATPase H(+)-transporting lysosomal accessory protein 2
V-type proton ATPase 16 kDa proteolipid subunit
B [auth U]KIAA1609 protein, isoform CRA_a---
F [auth O],
G [auth P],
H [auth Q]
V-type proton ATPase subunit B, brain isoform

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth a]IPR026028ATPase, V0 complex, subunit 116kDa, eukaryoticFamily
A [auth a]IPR002490V-type ATPase, V0 complex, 116kDa subunit familyFamily
C [auth L],
D [auth M],
E [auth N]
IPR022878V-type ATP synthase catalytic alpha chainFamily
C [auth L],
D [auth M],
E [auth N]
IPR024034ATPase, F1/V1 complex, beta/alpha subunit, C-terminalHomologous Superfamily
C [auth L],
D [auth M],
E [auth N]
IPR036121ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamilyHomologous Superfamily
C [auth L],
D [auth M],
E [auth N]
IPR000194ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domainDomain
C [auth L],
D [auth M],
E [auth N]
IPR005725ATPase, V1 complex, subunit AFamily
C [auth L],
D [auth M],
E [auth N]
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
C [auth L],
D [auth M],
E [auth N]
IPR004100ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domainDomain
C [auth L],
D [auth M],
E [auth N]
IPR031686ATPsynthase alpha/beta subunit, N-terminal extensionDomain
C [auth L],
D [auth M],
E [auth N]
IPR023366ATP synthase subunit alpha, N-terminal domain-like superfamilyHomologous Superfamily
C [auth L],
D [auth M],
E [auth N]
IPR020003ATPase, alpha/beta subunit, nucleotide-binding domain, active siteActive Site
I [auth D]IPR002699ATPase, V1 complex, subunit DFamily
J [auth b],
K [auth c],
L [auth d]
IPR038495V-type ATPase subunit E, C-terminal domain superfamilyHomologous Superfamily
J [auth b],
K [auth c],
L [auth d]
IPR002842V-type ATPase subunit EFamily
M [auth e],
N [auth f],
O [auth g]
IPR005124Vacuolar (H+)-ATPase G subunitFamily
P [auth F]IPR008218ATPase, V1 complex, subunit FFamily
P [auth F]IPR036906ATPase, V1 complex, subunit F superfamilyHomologous Superfamily
P [auth F]IPR005772ATPase, V1 complex, subunit F, eukaryoticFamily
Q [auth C]IPR036132Vacuolar ATP synthase subunit C superfamilyHomologous Superfamily
Q [auth C]IPR004907ATPase, V1 complex, subunit CFamily
R [auth H]IPR004908ATPase, V1 complex, subunit HFamily
R [auth H]IPR016024Armadillo-type foldHomologous Superfamily
R [auth H]IPR011989Armadillo-like helicalHomologous Superfamily
R [auth H]IPR038497ATPase, V1 complex, subunit H, C-terminal domain superfamilyHomologous Superfamily
R [auth H]IPR011987ATPase, V1 complex, subunit H, C-terminalDomain
T [auth m]IPR017385ATPase, V0 complex, subunit e1/e2, metazoaFamily
T [auth m]IPR008389ATPase, V0 complex, subunit e1/e2Family
U [auth n]IPR026770Ribonuclease kappaFamily
Z [auth 1]IPR035921F/V-ATP synthase subunit C superfamilyHomologous Superfamily
Z [auth 1]IPR002379V-ATPase proteolipid subunit C-like domainDomain
Z [auth 1]IPR000245V-ATPase proteolipid subunitFamily
S [auth k]IPR036079V-type ATP synthase subunit c/d subunit superfamilyHomologous Superfamily
S [auth k]IPR035067V-type ATPase subunit C/dHomologous Superfamily
S [auth k]IPR044911V-type ATP synthase c/d subunit, domain 3 superfamilyHomologous Superfamily
S [auth k]IPR002843ATPase, V0 complex, c/d subunitFamily
S [auth k]IPR016727ATPase, V0 complex, subunit dFamily
V [auth s]IPR046755V-type proton ATPase subunit S1, luminal domainDomain
V [auth s]IPR008388V0 complex accessory subunit Ac45Family
V [auth s]IPR046756V-type proton ATPase subunit S1/VOA1, transmembrane domainDomain
W [auth r]IPR012493Renin receptor-likeFamily
IPR011555V-ATPase proteolipid subunit C, eukaryoticFamily
IPR035921F/V-ATP synthase subunit C superfamilyHomologous Superfamily
IPR002379V-ATPase proteolipid subunit C-like domainDomain
IPR000245V-ATPase proteolipid subunitFamily
F [auth O],
G [auth P],
H [auth Q]
IPR000194ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domainDomain
F [auth O],
G [auth P],
H [auth Q]
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
F [auth O],
G [auth P],
H [auth Q]
IPR004100ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domainDomain
F [auth O],
G [auth P],
H [auth Q]
IPR005723ATPase, V1 complex, subunit BFamily
F [auth O],
G [auth P],
H [auth Q]
IPR022879V-type ATP synthase regulatory subunit B/betaFamily
F [auth O],
G [auth P],
H [auth Q]
IPR020003ATPase, alpha/beta subunit, nucleotide-binding domain, active siteActive Site

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
A [auth a]PharosQ9HBG4
C [auth L],
D [auth M],
E [auth N]
PharosP38606
I [auth D]PharosQ9Y5K8
J [auth b],
K [auth c],
L [auth d]
PharosP36543
M [auth e],
N [auth f],
O [auth g]
PharosO75348
P [auth F]PharosQ16864
Q [auth C]PharosP21283
R [auth H]PharosQ9UI12
T [auth m]PharosO15342
Z [auth 1]PharosQ99437
S [auth k]PharosP61421
V [auth s]PharosQ15904
F [auth O],
G [auth P],
H [auth Q]
PharosP21281