7UMT

Structure of the VP5/VP8 assembly from the human rotavirus strain CDC-9 - Reversed conformation

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D [auth A]	Rota_Capsid_VP6_2nd	e7umtA2	A: beta sandwiches	X: jelly-roll	H: Viral protein domain (From Topology)	T: Viral protein domain	F: Rota_Capsid_VP6_2nd	ECOD (1.6)
D [auth A]	Rota_Capsid_VP6_1st	e7umtA1	A: alpha bundles	X: A virus capsid protein alpha-helical domain (From Topology)	H: A virus capsid protein alpha-helical domain (From Topology)	T: A virus capsid protein alpha-helical domain	F: Rota_Capsid_VP6_1st	ECOD (1.6)
E [auth B]	Rota_Capsid_VP6_2nd	e7umtB1	A: beta sandwiches	X: jelly-roll	H: Viral protein domain (From Topology)	T: Viral protein domain	F: Rota_Capsid_VP6_2nd	ECOD (1.6)
E [auth B]	Rota_Capsid_VP6_1st	e7umtB2	A: alpha bundles	X: A virus capsid protein alpha-helical domain (From Topology)	H: A virus capsid protein alpha-helical domain (From Topology)	T: A virus capsid protein alpha-helical domain	F: Rota_Capsid_VP6_1st	ECOD (1.6)
F [auth C]	Rota_Capsid_VP6_2nd	e7umtC2	A: beta sandwiches	X: jelly-roll	H: Viral protein domain (From Topology)	T: Viral protein domain	F: Rota_Capsid_VP6_2nd	ECOD (1.6)
F [auth C]	Rota_Capsid_VP6_1st	e7umtC1	A: alpha bundles	X: A virus capsid protein alpha-helical domain (From Topology)	H: A virus capsid protein alpha-helical domain (From Topology)	T: A virus capsid protein alpha-helical domain	F: Rota_Capsid_VP6_1st	ECOD (1.6)
G [auth D]	Rota_Capsid_VP6_2nd	e7umtD2	A: beta sandwiches	X: jelly-roll	H: Viral protein domain (From Topology)	T: Viral protein domain	F: Rota_Capsid_VP6_2nd	ECOD (1.6)
G [auth D]	Rota_Capsid_VP6_1st	e7umtD1	A: alpha bundles	X: A virus capsid protein alpha-helical domain (From Topology)	H: A virus capsid protein alpha-helical domain (From Topology)	T: A virus capsid protein alpha-helical domain	F: Rota_Capsid_VP6_1st	ECOD (1.6)
H [auth E]	Rota_Capsid_VP6_2nd	e7umtE2	A: beta sandwiches	X: jelly-roll	H: Viral protein domain (From Topology)	T: Viral protein domain	F: Rota_Capsid_VP6_2nd	ECOD (1.6)
H [auth E]	Rota_Capsid_VP6_1st	e7umtE1	A: alpha bundles	X: A virus capsid protein alpha-helical domain (From Topology)	H: A virus capsid protein alpha-helical domain (From Topology)	T: A virus capsid protein alpha-helical domain	F: Rota_Capsid_VP6_1st	ECOD (1.6)
I [auth F]	Rota_Capsid_VP6_2nd	e7umtF1	A: beta sandwiches	X: jelly-roll	H: Viral protein domain (From Topology)	T: Viral protein domain	F: Rota_Capsid_VP6_2nd	ECOD (1.6)
I [auth F]	Rota_Capsid_VP6_1st	e7umtF2	A: alpha bundles	X: A virus capsid protein alpha-helical domain (From Topology)	H: A virus capsid protein alpha-helical domain (From Topology)	T: A virus capsid protein alpha-helical domain	F: Rota_Capsid_VP6_1st	ECOD (1.6)
J [auth G]	Rota_Capsid_VP6_2nd	e7umtG2	A: beta sandwiches	X: jelly-roll	H: Viral protein domain (From Topology)	T: Viral protein domain	F: Rota_Capsid_VP6_2nd	ECOD (1.6)
J [auth G]	Rota_Capsid_VP6_1st	e7umtG1	A: alpha bundles	X: A virus capsid protein alpha-helical domain (From Topology)	H: A virus capsid protein alpha-helical domain (From Topology)	T: A virus capsid protein alpha-helical domain	F: Rota_Capsid_VP6_1st	ECOD (1.6)
K [auth H]	Rota_Capsid_VP6_2nd	e7umtH2	A: beta sandwiches	X: jelly-roll	H: Viral protein domain (From Topology)	T: Viral protein domain	F: Rota_Capsid_VP6_2nd	ECOD (1.6)
K [auth H]	Rota_Capsid_VP6_1st	e7umtH1	A: alpha bundles	X: A virus capsid protein alpha-helical domain (From Topology)	H: A virus capsid protein alpha-helical domain (From Topology)	T: A virus capsid protein alpha-helical domain	F: Rota_Capsid_VP6_1st	ECOD (1.6)
L [auth I]	Rota_Capsid_VP6_2nd	e7umtI2	A: beta sandwiches	X: jelly-roll	H: Viral protein domain (From Topology)	T: Viral protein domain	F: Rota_Capsid_VP6_2nd	ECOD (1.6)
L [auth I]	Rota_Capsid_VP6_1st	e7umtI1	A: alpha bundles	X: A virus capsid protein alpha-helical domain (From Topology)	H: A virus capsid protein alpha-helical domain (From Topology)	T: A virus capsid protein alpha-helical domain	F: Rota_Capsid_VP6_1st	ECOD (1.6)
M [auth J]	Rota_Capsid_VP6_2nd	e7umtJ1	A: beta sandwiches	X: jelly-roll	H: Viral protein domain (From Topology)	T: Viral protein domain	F: Rota_Capsid_VP6_2nd	ECOD (1.6)
M [auth J]	Rota_Capsid_VP6_1st	e7umtJ2	A: alpha bundles	X: A virus capsid protein alpha-helical domain (From Topology)	H: A virus capsid protein alpha-helical domain (From Topology)	T: A virus capsid protein alpha-helical domain	F: Rota_Capsid_VP6_1st	ECOD (1.6)
N [auth K]	Rota_Capsid_VP6_2nd	e7umtK2	A: beta sandwiches	X: jelly-roll	H: Viral protein domain (From Topology)	T: Viral protein domain	F: Rota_Capsid_VP6_2nd	ECOD (1.6)
N [auth K]	Rota_Capsid_VP6_1st	e7umtK1	A: alpha bundles	X: A virus capsid protein alpha-helical domain (From Topology)	H: A virus capsid protein alpha-helical domain (From Topology)	T: A virus capsid protein alpha-helical domain	F: Rota_Capsid_VP6_1st	ECOD (1.6)
O [auth L]	Rota_Capsid_VP6_2nd	e7umtL1	A: beta sandwiches	X: jelly-roll	H: Viral protein domain (From Topology)	T: Viral protein domain	F: Rota_Capsid_VP6_2nd	ECOD (1.6)
O [auth L]	Rota_Capsid_VP6_1st	e7umtL2	A: alpha bundles	X: A virus capsid protein alpha-helical domain (From Topology)	H: A virus capsid protein alpha-helical domain (From Topology)	T: A virus capsid protein alpha-helical domain	F: Rota_Capsid_VP6_1st	ECOD (1.6)
P [auth M]	Rota_Capsid_VP6_2nd	e7umtM2	A: beta sandwiches	X: jelly-roll	H: Viral protein domain (From Topology)	T: Viral protein domain	F: Rota_Capsid_VP6_2nd	ECOD (1.6)
P [auth M]	Rota_Capsid_VP6_1st	e7umtM1	A: alpha bundles	X: A virus capsid protein alpha-helical domain (From Topology)	H: A virus capsid protein alpha-helical domain (From Topology)	T: A virus capsid protein alpha-helical domain	F: Rota_Capsid_VP6_1st	ECOD (1.6)
Q [auth N]	Rota_Capsid_VP6_2nd	e7umtN1	A: beta sandwiches	X: jelly-roll	H: Viral protein domain (From Topology)	T: Viral protein domain	F: Rota_Capsid_VP6_2nd	ECOD (1.6)
Q [auth N]	Rota_Capsid_VP6_1st	e7umtN2	A: alpha bundles	X: A virus capsid protein alpha-helical domain (From Topology)	H: A virus capsid protein alpha-helical domain (From Topology)	T: A virus capsid protein alpha-helical domain	F: Rota_Capsid_VP6_1st	ECOD (1.6)
R [auth O]	Rota_Capsid_VP6_2nd	e7umtO2	A: beta sandwiches	X: jelly-roll	H: Viral protein domain (From Topology)	T: Viral protein domain	F: Rota_Capsid_VP6_2nd	ECOD (1.6)
R [auth O]	Rota_Capsid_VP6_1st	e7umtO1	A: alpha bundles	X: A virus capsid protein alpha-helical domain (From Topology)	H: A virus capsid protein alpha-helical domain (From Topology)	T: A virus capsid protein alpha-helical domain	F: Rota_Capsid_VP6_1st	ECOD (1.6)
S [auth P]	Rota_Capsid_VP6_2nd	e7umtP1	A: beta sandwiches	X: jelly-roll	H: Viral protein domain (From Topology)	T: Viral protein domain	F: Rota_Capsid_VP6_2nd	ECOD (1.6)
S [auth P]	Rota_Capsid_VP6_1st	e7umtP2	A: alpha bundles	X: A virus capsid protein alpha-helical domain (From Topology)	H: A virus capsid protein alpha-helical domain (From Topology)	T: A virus capsid protein alpha-helical domain	F: Rota_Capsid_VP6_1st	ECOD (1.6)
T [auth Q]	Rota_Capsid_VP6_2nd	e7umtQ2	A: beta sandwiches	X: jelly-roll	H: Viral protein domain (From Topology)	T: Viral protein domain	F: Rota_Capsid_VP6_2nd	ECOD (1.6)
T [auth Q]	Rota_Capsid_VP6_1st	e7umtQ1	A: alpha bundles	X: A virus capsid protein alpha-helical domain (From Topology)	H: A virus capsid protein alpha-helical domain (From Topology)	T: A virus capsid protein alpha-helical domain	F: Rota_Capsid_VP6_1st	ECOD (1.6)
U [auth R]	Rota_Capsid_VP6_2nd	e7umtR1	A: beta sandwiches	X: jelly-roll	H: Viral protein domain (From Topology)	T: Viral protein domain	F: Rota_Capsid_VP6_2nd	ECOD (1.6)
U [auth R]	Rota_Capsid_VP6_1st	e7umtR2	A: alpha bundles	X: A virus capsid protein alpha-helical domain (From Topology)	H: A virus capsid protein alpha-helical domain (From Topology)	T: A virus capsid protein alpha-helical domain	F: Rota_Capsid_VP6_1st	ECOD (1.6)
AA [auth f]	VP7_2nd	e7umtf1	A: beta sandwiches	X: jelly-roll	H: Jelly-roll domain in outer capsid glycoprotein VP7 (From Topology)	T: Jelly-roll domain in outer capsid glycoprotein VP7	F: VP7_2nd	ECOD (1.6)
AA [auth f]	VP7_1st	e7umtf2	A: a/b three-layered sandwiches	X: Flavodoxin-like	H: Flavodoxin-like domain in outer capsid glycoprotein VP7 (From Topology)	T: Flavodoxin-like domain in outer capsid glycoprotein VP7	F: VP7_1st	ECOD (1.6)
BA [auth g]	VP7_2nd	e7umtg1	A: beta sandwiches	X: jelly-roll	H: Jelly-roll domain in outer capsid glycoprotein VP7 (From Topology)	T: Jelly-roll domain in outer capsid glycoprotein VP7	F: VP7_2nd	ECOD (1.6)
BA [auth g]	VP7_1st	e7umtg2	A: a/b three-layered sandwiches	X: Flavodoxin-like	H: Flavodoxin-like domain in outer capsid glycoprotein VP7 (From Topology)	T: Flavodoxin-like domain in outer capsid glycoprotein VP7	F: VP7_1st	ECOD (1.6)
CA [auth h]	VP7_2nd	e7umth1	A: beta sandwiches	X: jelly-roll	H: Jelly-roll domain in outer capsid glycoprotein VP7 (From Topology)	T: Jelly-roll domain in outer capsid glycoprotein VP7	F: VP7_2nd	ECOD (1.6)
CA [auth h]	VP7_1st	e7umth2	A: a/b three-layered sandwiches	X: Flavodoxin-like	H: Flavodoxin-like domain in outer capsid glycoprotein VP7 (From Topology)	T: Flavodoxin-like domain in outer capsid glycoprotein VP7	F: VP7_1st	ECOD (1.6)
DA [auth i]	VP7_2nd	e7umti2	A: beta sandwiches	X: jelly-roll	H: Jelly-roll domain in outer capsid glycoprotein VP7 (From Topology)	T: Jelly-roll domain in outer capsid glycoprotein VP7	F: VP7_2nd	ECOD (1.6)
DA [auth i]	VP7_1st	e7umti1	A: a/b three-layered sandwiches	X: Flavodoxin-like	H: Flavodoxin-like domain in outer capsid glycoprotein VP7 (From Topology)	T: Flavodoxin-like domain in outer capsid glycoprotein VP7	F: VP7_1st	ECOD (1.6)
EA [auth j]	VP7_2nd	e7umtj1	A: beta sandwiches	X: jelly-roll	H: Jelly-roll domain in outer capsid glycoprotein VP7 (From Topology)	T: Jelly-roll domain in outer capsid glycoprotein VP7	F: VP7_2nd	ECOD (1.6)
EA [auth j]	VP7_1st	e7umtj2	A: a/b three-layered sandwiches	X: Flavodoxin-like	H: Flavodoxin-like domain in outer capsid glycoprotein VP7 (From Topology)	T: Flavodoxin-like domain in outer capsid glycoprotein VP7	F: VP7_1st	ECOD (1.6)
FA [auth k]	VP7_2nd	e7umtk2	A: beta sandwiches	X: jelly-roll	H: Jelly-roll domain in outer capsid glycoprotein VP7 (From Topology)	T: Jelly-roll domain in outer capsid glycoprotein VP7	F: VP7_2nd	ECOD (1.6)
FA [auth k]	VP7_1st	e7umtk1	A: a/b three-layered sandwiches	X: Flavodoxin-like	H: Flavodoxin-like domain in outer capsid glycoprotein VP7 (From Topology)	T: Flavodoxin-like domain in outer capsid glycoprotein VP7	F: VP7_1st	ECOD (1.6)
GA [auth l]	VP7_2nd	e7umtl2	A: beta sandwiches	X: jelly-roll	H: Jelly-roll domain in outer capsid glycoprotein VP7 (From Topology)	T: Jelly-roll domain in outer capsid glycoprotein VP7	F: VP7_2nd	ECOD (1.6)
GA [auth l]	VP7_1st	e7umtl1	A: a/b three-layered sandwiches	X: Flavodoxin-like	H: Flavodoxin-like domain in outer capsid glycoprotein VP7 (From Topology)	T: Flavodoxin-like domain in outer capsid glycoprotein VP7	F: VP7_1st	ECOD (1.6)
HA [auth m]	VP7_2nd	e7umtm2	A: beta sandwiches	X: jelly-roll	H: Jelly-roll domain in outer capsid glycoprotein VP7 (From Topology)	T: Jelly-roll domain in outer capsid glycoprotein VP7	F: VP7_2nd	ECOD (1.6)
HA [auth m]	VP7_1st	e7umtm1	A: a/b three-layered sandwiches	X: Flavodoxin-like	H: Flavodoxin-like domain in outer capsid glycoprotein VP7 (From Topology)	T: Flavodoxin-like domain in outer capsid glycoprotein VP7	F: VP7_1st	ECOD (1.6)
IA [auth n]	VP7_2nd	e7umtn1	A: beta sandwiches	X: jelly-roll	H: Jelly-roll domain in outer capsid glycoprotein VP7 (From Topology)	T: Jelly-roll domain in outer capsid glycoprotein VP7	F: VP7_2nd	ECOD (1.6)
IA [auth n]	VP7_1st	e7umtn2	A: a/b three-layered sandwiches	X: Flavodoxin-like	H: Flavodoxin-like domain in outer capsid glycoprotein VP7 (From Topology)	T: Flavodoxin-like domain in outer capsid glycoprotein VP7	F: VP7_1st	ECOD (1.6)
JA [auth o]	VP7_2nd	e7umto1	A: beta sandwiches	X: jelly-roll	H: Jelly-roll domain in outer capsid glycoprotein VP7 (From Topology)	T: Jelly-roll domain in outer capsid glycoprotein VP7	F: VP7_2nd	ECOD (1.6)
JA [auth o]	VP7_1st	e7umto2	A: a/b three-layered sandwiches	X: Flavodoxin-like	H: Flavodoxin-like domain in outer capsid glycoprotein VP7 (From Topology)	T: Flavodoxin-like domain in outer capsid glycoprotein VP7	F: VP7_1st	ECOD (1.6)
KA [auth p]	VP7_2nd	e7umtp1	A: beta sandwiches	X: jelly-roll	H: Jelly-roll domain in outer capsid glycoprotein VP7 (From Topology)	T: Jelly-roll domain in outer capsid glycoprotein VP7	F: VP7_2nd	ECOD (1.6)
KA [auth p]	VP7_1st	e7umtp2	A: a/b three-layered sandwiches	X: Flavodoxin-like	H: Flavodoxin-like domain in outer capsid glycoprotein VP7 (From Topology)	T: Flavodoxin-like domain in outer capsid glycoprotein VP7	F: VP7_1st	ECOD (1.6)
LA [auth q]	VP7_2nd	e7umtq2	A: beta sandwiches	X: jelly-roll	H: Jelly-roll domain in outer capsid glycoprotein VP7 (From Topology)	T: Jelly-roll domain in outer capsid glycoprotein VP7	F: VP7_2nd	ECOD (1.6)
LA [auth q]	VP7_1st	e7umtq1	A: a/b three-layered sandwiches	X: Flavodoxin-like	H: Flavodoxin-like domain in outer capsid glycoprotein VP7 (From Topology)	T: Flavodoxin-like domain in outer capsid glycoprotein VP7	F: VP7_1st	ECOD (1.6)
MA [auth r]	VP7_2nd	e7umtr1	A: beta sandwiches	X: jelly-roll	H: Jelly-roll domain in outer capsid glycoprotein VP7 (From Topology)	T: Jelly-roll domain in outer capsid glycoprotein VP7	F: VP7_2nd	ECOD (1.6)
MA [auth r]	VP7_1st	e7umtr2	A: a/b three-layered sandwiches	X: Flavodoxin-like	H: Flavodoxin-like domain in outer capsid glycoprotein VP7 (From Topology)	T: Flavodoxin-like domain in outer capsid glycoprotein VP7	F: VP7_1st	ECOD (1.6)
V [auth a]	VP7_2nd	e7umta2	A: beta sandwiches	X: jelly-roll	H: Jelly-roll domain in outer capsid glycoprotein VP7 (From Topology)	T: Jelly-roll domain in outer capsid glycoprotein VP7	F: VP7_2nd	ECOD (1.6)
V [auth a]	VP7_1st	e7umta1	A: a/b three-layered sandwiches	X: Flavodoxin-like	H: Flavodoxin-like domain in outer capsid glycoprotein VP7 (From Topology)	T: Flavodoxin-like domain in outer capsid glycoprotein VP7	F: VP7_1st	ECOD (1.6)
W [auth b]	VP7_2nd	e7umtb1	A: beta sandwiches	X: jelly-roll	H: Jelly-roll domain in outer capsid glycoprotein VP7 (From Topology)	T: Jelly-roll domain in outer capsid glycoprotein VP7	F: VP7_2nd	ECOD (1.6)
W [auth b]	VP7_1st	e7umtb2	A: a/b three-layered sandwiches	X: Flavodoxin-like	H: Flavodoxin-like domain in outer capsid glycoprotein VP7 (From Topology)	T: Flavodoxin-like domain in outer capsid glycoprotein VP7	F: VP7_1st	ECOD (1.6)
X [auth c]	VP7_2nd	e7umtc2	A: beta sandwiches	X: jelly-roll	H: Jelly-roll domain in outer capsid glycoprotein VP7 (From Topology)	T: Jelly-roll domain in outer capsid glycoprotein VP7	F: VP7_2nd	ECOD (1.6)
X [auth c]	VP7_1st	e7umtc1	A: a/b three-layered sandwiches	X: Flavodoxin-like	H: Flavodoxin-like domain in outer capsid glycoprotein VP7 (From Topology)	T: Flavodoxin-like domain in outer capsid glycoprotein VP7	F: VP7_1st	ECOD (1.6)
Y [auth d]	VP7_2nd	e7umtd1	A: beta sandwiches	X: jelly-roll	H: Jelly-roll domain in outer capsid glycoprotein VP7 (From Topology)	T: Jelly-roll domain in outer capsid glycoprotein VP7	F: VP7_2nd	ECOD (1.6)
Y [auth d]	VP7_1st	e7umtd2	A: a/b three-layered sandwiches	X: Flavodoxin-like	H: Flavodoxin-like domain in outer capsid glycoprotein VP7 (From Topology)	T: Flavodoxin-like domain in outer capsid glycoprotein VP7	F: VP7_1st	ECOD (1.6)
Z [auth e]	VP7_2nd	e7umte2	A: beta sandwiches	X: jelly-roll	H: Jelly-roll domain in outer capsid glycoprotein VP7 (From Topology)	T: Jelly-roll domain in outer capsid glycoprotein VP7	F: VP7_2nd	ECOD (1.6)
Z [auth e]	VP7_1st	e7umte1	A: a/b three-layered sandwiches	X: Flavodoxin-like	H: Flavodoxin-like domain in outer capsid glycoprotein VP7 (From Topology)	T: Flavodoxin-like domain in outer capsid glycoprotein VP7	F: VP7_1st	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A [auth 1], B [auth 2], C [auth 3]	PF17477	Rotavirus VP4 membrane interaction domain (Rota_VP4_MID)	Rotavirus VP4 membrane interaction domain	This entry represents the VP4 membrane interaction domain.	Domain
A [auth 1], B [auth 2], C [auth 3]	PF17478	Rotavirus VP4 helical domain (VP4_helical)	Rotavirus VP4 helical domain	-	Domain
D [auth A], E [auth B], F [auth C], G [auth D], H [auth E], D [auth A], E [auth B], F [auth C], G [auth D], H [auth E], I [auth F], J [auth G], K [auth H], L [auth I], M [auth J], N [auth K], O [auth L], P [auth M], Q [auth N], R [auth O], S [auth P], T [auth Q], U [auth R]	PF00980	Rotavirus major capsid protein VP6 (Rota_Capsid_VP6)	Rotavirus major capsid protein VP6	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth 1], B [auth 2], C [auth 3]	Outer capsid protein VP5*	-	virion attachment to host cell biological process involved in interspecies interaction between organisms adhesion of symbiont to host cell viral process viral life cycle adhesion of symbiont to host biological process involved in interaction with host biological process involved in symbiotic interaction symbiont-mediated disruption of host anatomical structure symbiont entry into host cell via permeabilization of inner membrane symbiont entry into host cell via permeabilization of host membrane symbiont-mediated perturbation of host membrane symbiont-mediated disruption of host cellular anatomical entity symbiont entry into host cell virion attachment to host cell biological process involved in interspecies interaction between organisms adhesion of symbiont to host cell viral process viral life cycle adhesion of symbiont to host biological process involved in interaction with host biological process involved in symbiotic interaction symbiont-mediated disruption of host anatomical structure symbiont entry into host cell via permeabilization of inner membrane symbiont entry into host cell via permeabilization of host membrane symbiont-mediated perturbation of host membrane symbiont-mediated disruption of host cellular anatomical entity symbiont entry into host cell symbiont entry into host disruption of anatomical structure in another organism permeabilization of host organelle membrane involved in viral entry into host cell	host cellular component host intracellular part host cytoskeleton host cell part host intracellular region cellular anatomical entity host intracellular organelle membrane host intracellular membrane-bounded organelle host cell endoplasmic reticulum-Golgi intermediate compartment host cell cytoplasm host cell cytoplasm part host cell plasma membrane host cell membrane host cellular component host intracellular part host cytoskeleton host cell part host intracellular region cellular anatomical entity host intracellular organelle membrane host intracellular membrane-bounded organelle host cell endoplasmic reticulum-Golgi intermediate compartment host cell cytoplasm host cell cytoplasm part host cell plasma membrane host cell membrane viral capsid icosahedral viral capsid virion component viral outer capsid host cell endoplasmic reticulum host cell rough endoplasmic reticulum
D [auth A], E [auth B], F [auth C], G [auth D], H [auth E], D [auth A], E [auth B], F [auth C], G [auth D], H [auth E], I [auth F], J [auth G], K [auth H], L [auth I], M [auth J], N [auth K], O [auth L], P [auth M], Q [auth N], R [auth O], S [auth P], T [auth Q], U [auth R]	Intermediate capsid protein VP6	structural molecule activity cation binding ion binding binding metal ion binding small molecule binding host cell surface binding host cell surface receptor binding	membrane organization cellular component organization membrane fusion fusion of virus membrane with host plasma membrane viral process cellular process cellular component organization or biogenesis membrane fusion involved in viral entry into host cell	virion component viral membrane viral envelope viral capsid icosahedral viral capsid viral intermediate capsid
AA [auth f], BA [auth g], CA [auth h], DA [auth i], EA [auth j], AA [auth f], BA [auth g], CA [auth h], DA [auth i], EA [auth j], FA [auth k], GA [auth l], HA [auth m], IA [auth n], JA [auth o], KA [auth p], LA [auth q], MA [auth r], V [auth a], W [auth b], X [auth c], Y [auth d], Z [auth e]	Outer capsid glycoprotein VP7	cation binding ion binding binding metal ion binding small molecule binding	-	host intracellular membrane-bounded organelle host cellular component host intracellular part host cell endoplasmic reticulum cellular anatomical entity host cell cytoplasm part host intracellular organelle host cell cytoplasm host cell part host cell endoplasmic reticulum lumen host intracellular region membrane viral capsid icosahedral viral capsid host intracellular membrane-bounded organelle host cellular component host intracellular part host cell endoplasmic reticulum cellular anatomical entity host cell cytoplasm part host intracellular organelle host cell cytoplasm host cell part host cell endoplasmic reticulum lumen host intracellular region membrane viral capsid icosahedral viral capsid virion component viral outer capsid T=13 icosahedral viral capsid

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth 1], B [auth 2], C [auth 3]	IPR000416	Haemagglutinin outer capsid protein VP4, concanavalin-like domain	Domain
A [auth 1], B [auth 2], C [auth 3]	IPR035330	Rotavirus VP4, membrane interaction domain	Domain
A [auth 1], B [auth 2], C [auth 3]	IPR013320	Concanavalin A-like lectin/glucanase domain superfamily	Homologous Superfamily
A [auth 1], B [auth 2], C [auth 3]	IPR035329	Rotavirus VP4 helical domain	Domain
A [auth 1], B [auth 2], C [auth 3]	IPR042546	Outer capsid protein VP4	Family
A [auth 1], B [auth 2], C [auth 3]	IPR038017	Rotavirus VP4, membrane interaction domain superfamily	Homologous Superfamily
D [auth A], E [auth B], F [auth C], G [auth D], H [auth E], D [auth A], E [auth B], F [auth C], G [auth D], H [auth E], I [auth F], J [auth G], K [auth H], L [auth I], M [auth J], N [auth K], O [auth L], P [auth M], Q [auth N], R [auth O], S [auth P], T [auth Q], U [auth R]	IPR001385	Rotavirus A/C, major capsid protein VP6	Family
D [auth A], E [auth B], F [auth C], G [auth D], H [auth E], D [auth A], E [auth B], F [auth C], G [auth D], H [auth E], I [auth F], J [auth G], K [auth H], L [auth I], M [auth J], N [auth K], O [auth L], P [auth M], Q [auth N], R [auth O], S [auth P], T [auth Q], U [auth R]	IPR008935	Virus capsid protein, alpha-helical	Homologous Superfamily
D [auth A], E [auth B], F [auth C], G [auth D], H [auth E], D [auth A], E [auth B], F [auth C], G [auth D], H [auth E], I [auth F], J [auth G], K [auth H], L [auth I], M [auth J], N [auth K], O [auth L], P [auth M], Q [auth N], R [auth O], S [auth P], T [auth Q], U [auth R]	IPR008980	Viral capsid/haemagglutinin protein	Homologous Superfamily
AA [auth f], BA [auth g], CA [auth h], DA [auth i], EA [auth j], AA [auth f], BA [auth g], CA [auth h], DA [auth i], EA [auth j], FA [auth k], GA [auth l], HA [auth m], IA [auth n], JA [auth o], KA [auth p], LA [auth q], MA [auth r], V [auth a], W [auth b], X [auth c], Y [auth d], Z [auth e]	IPR042207	Glycoprotein VP7, domain 1	Homologous Superfamily
AA [auth f], BA [auth g], CA [auth h], DA [auth i], EA [auth j], AA [auth f], BA [auth g], CA [auth h], DA [auth i], EA [auth j], FA [auth k], GA [auth l], HA [auth m], IA [auth n], JA [auth o], KA [auth p], LA [auth q], MA [auth r], V [auth a], W [auth b], X [auth c], Y [auth d], Z [auth e]	IPR001963	Glycoprotein VP7	Family
AA [auth f], BA [auth g], CA [auth h], DA [auth i], EA [auth j], AA [auth f], BA [auth g], CA [auth h], DA [auth i], EA [auth j], FA [auth k], GA [auth l], HA [auth m], IA [auth n], JA [auth o], KA [auth p], LA [auth q], MA [auth r], V [auth a], W [auth b], X [auth c], Y [auth d], Z [auth e]	IPR042210	Glycoprotein VP7, domain 2	Homologous Superfamily