Cryo-EM structure of PDF-2180 Spike glycoprotein
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | MATH_2 | e7u6rA1 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: MATH_2 | ECOD (v295.2) |
| B | MATH_2 | e7u6rB1 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: MATH_2 | ECOD (v295.2) |
| C | MATH_2 | e7u6rC1 | A: alpha arrays | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel | F: MATH_2 | ECOD (v295.2) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A | 2.60.120.960 | Mainly Beta | Sandwich | Jelly Rolls | Spike glycoprotein, N-terminal domain | CATH (utative) |
| B | 2.60.120.960 | Mainly Beta | Sandwich | Jelly Rolls | Spike glycoprotein, N-terminal domain | CATH (utative) |
| C | 2.60.120.960 | Mainly Beta | Sandwich | Jelly Rolls | Spike glycoprotein, N-terminal domain | CATH (utative) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR043614 | Spike glycoprotein S2, coronavirus, C-terminal | Domain | |
| IPR044873 | Spike glycoprotein S2, coronavirus, heptad repeat 1 | Domain | |
| IPR043473 | Spike glycoprotein S2 superfamily, coronavirus | Homologous Superfamily | |
| IPR002552 | Spike glycoprotein S2, coronavirus | Domain | |
| IPR044874 | Spike glycoprotein S2, coronavirus, heptad repeat 2 | Domain |














