Crystal structure of the B1 TCR in complex with HLA-DP4-Ply
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| S | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8054547 | 3000071 | SCOP2B (2022-06-29) |
| N | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8054547 | 3000071 | SCOP2B (2022-06-29) |
| I | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8054547 | 3000071 | SCOP2B (2022-06-29) |
| G [auth D] | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8054547 | 3000071 | SCOP2B (2022-06-29) |
| T | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8054555 | 3000071 | SCOP2B (2022-06-29) |
| O | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8054555 | 3000071 | SCOP2B (2022-06-29) |
| J | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8054555 | 3000071 | SCOP2B (2022-06-29) |
| H [auth E] | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8054555 | 3000071 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| P | AAA | e7t2dP1 | A: alpha arrays | X: cradle loop barrel | H: Cytochrome P450 | T: Cytochrome P450 | F: AAA | ECOD (v295) |
| K | AAA | e7t2dK1 | A: alpha arrays | X: cradle loop barrel | H: Cytochrome P450 | T: Cytochrome P450 | F: AAA | ECOD (v295) |
| D [auth F] | AAA | e7t2dF1 | A: alpha arrays | X: cradle loop barrel | H: Cytochrome P450 | T: Cytochrome P450 | F: AAA | ECOD (v295) |
| A | AAA | e7t2dA1 | A: alpha arrays | X: cradle loop barrel | H: Cytochrome P450 | T: Cytochrome P450 | F: AAA | ECOD (v295) |
| Q | AAA | e7t2dQ1 | A: alpha arrays | X: cradle loop barrel | H: Cytochrome P450 | T: Cytochrome P450 | F: AAA | ECOD (v295) |
| L | AAA | e7t2dL1 | A: alpha arrays | X: cradle loop barrel | H: Cytochrome P450 | T: Cytochrome P450 | F: AAA | ECOD (v295) |
| E [auth G] | AAA | e7t2dG1 | A: alpha arrays | X: cradle loop barrel | H: Cytochrome P450 | T: Cytochrome P450 | F: AAA | ECOD (v295) |
| B | AAA | e7t2dB1 | A: alpha arrays | X: cradle loop barrel | H: Cytochrome P450 | T: Cytochrome P450 | F: AAA | ECOD (v295) |
| S | AAA | e7t2dS1 | A: alpha arrays | X: cradle loop barrel | H: Cytochrome P450 | T: Cytochrome P450 | F: AAA | ECOD (v295) |
| N | AAA | e7t2dN1 | A: alpha arrays | X: cradle loop barrel | H: Cytochrome P450 | T: Cytochrome P450 | F: AAA | ECOD (v295) |
| I | AAA | e7t2dI1 | A: alpha arrays | X: cradle loop barrel | H: Cytochrome P450 | T: Cytochrome P450 | F: AAA | ECOD (v295) |
| G [auth D] | AAA | e7t2dD1 | A: alpha arrays | X: cradle loop barrel | H: Cytochrome P450 | T: Cytochrome P450 | F: AAA | ECOD (v295) |
| T | AAA | e7t2dT1 | A: alpha arrays | X: cradle loop barrel | H: Cytochrome P450 | T: Cytochrome P450 | F: AAA | ECOD (v295) |
| O | AAA | e7t2dO1 | A: alpha arrays | X: cradle loop barrel | H: Cytochrome P450 | T: Cytochrome P450 | F: AAA | ECOD (v295) |
| J | AAA | e7t2dJ1 | A: alpha arrays | X: cradle loop barrel | H: Cytochrome P450 | T: Cytochrome P450 | F: AAA | ECOD (v295) |
| H [auth E] | AAA | e7t2dE1 | A: alpha arrays | X: cradle loop barrel | H: Cytochrome P450 | T: Cytochrome P450 | F: AAA | ECOD (v295) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| S | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (utative) |
| N | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (utative) |
| I | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (utative) |
| G [auth D] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (utative) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| A, D [auth F], K, P | PF07654 | Immunoglobulin C1-set domain (C1-set) | Immunoglobulin C1-set domain | Domain | |
| A, D [auth F], K, P | PF00993 | Class II histocompatibility antigen, alpha domain (MHC_II_alpha) | Class II histocompatibility antigen, alpha domain | Domain | |
| B, E [auth G], L, Q | PF00969 | Class II histocompatibility antigen, beta domain (MHC_II_beta) | Class II histocompatibility antigen, beta domain | Domain | |
| B, E [auth G], L, Q | PF07654 | Immunoglobulin C1-set domain (C1-set) | Immunoglobulin C1-set domain | Domain | |
| G [auth D], I, N, S | PF09291 | Domain of unknown function (DUF1968) (DUF1968) | Domain of unknown function (DUF1968) | Members of this family are found in mammalian T-cell antigen receptor, and adopt an immunoglobulin-like beta-sandwich fold, with seven strands in two beta-sheets in a Greek-key topology. Their exact function has not, as yet, been determined. | Domain |
| H [auth E], J, O, T | PF07654 | Immunoglobulin C1-set domain (C1-set) | Immunoglobulin C1-set domain | Domain |














