7SZ5
Cryo-EM structure of the extracellular module of the full-length EGFR bound to TGF-alpha "tips-separated" conformation
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Growth factor receptor domain-like | 8038763 | 3000398 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | L domain-like | 8038760 | 3001010 | SCOP2B (2022-06-29) |
C [auth B] | SCOP2B Superfamily | Growth factor receptor domain-like | 8038763 | 3000398 | SCOP2B (2022-06-29) |
C [auth B] | SCOP2B Superfamily | L domain-like | 8038760 | 3001010 | SCOP2B (2022-06-29) |
B [auth C] | SCOP2B Superfamily | EGF/Laminin-like | 8036460 | 3000412 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | EGF/Laminin-like | 8036460 | 3000412 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Recep_L_domain | e7sz5A2 | A: beta duplicates or obligate multimers | X: Single-stranded right-handed beta-helix | H: Leucine-rich repeats (From Topology) | T: Leucine-rich repeats | F: Recep_L_domain | ECOD (1.6) |
A | GF_recep_IV | e7sz5A4 | A: few secondary structure elements | X: EGF-like | H: Growth factor receptor domain (From Topology) | T: Growth factor receptor domain | F: GF_recep_IV | ECOD (1.6) |
A | Furin-like | e7sz5A3 | A: few secondary structure elements | X: EGF-like | H: Growth factor receptor domain (From Topology) | T: Growth factor receptor domain | F: Furin-like | ECOD (1.6) |
C [auth B] | Recep_L_domain | e7sz5B1 | A: beta duplicates or obligate multimers | X: Single-stranded right-handed beta-helix | H: Leucine-rich repeats (From Topology) | T: Leucine-rich repeats | F: Recep_L_domain | ECOD (1.6) |
C [auth B] | GF_recep_IV,Recep_L_domain | e7sz5B2 | A: beta duplicates or obligate multimers | X: Single-stranded right-handed beta-helix | H: Leucine-rich repeats (From Topology) | T: Leucine-rich repeats | F: GF_recep_IV,Recep_L_domain | ECOD (1.6) |
C [auth B] | Furin-like | e7sz5B3 | A: few secondary structure elements | X: EGF-like | H: Growth factor receptor domain (From Topology) | T: Growth factor receptor domain | F: Furin-like | ECOD (1.6) |
B [auth C] | EGF_1 | e7sz5C1 | A: few secondary structure elements | X: EGF-like | H: EGF-related | T: EGF/Laminin | F: EGF_1 | ECOD (1.6) |
D | EGF_1 | e7sz5D1 | A: few secondary structure elements | X: EGF-like | H: EGF-related | T: EGF/Laminin | F: EGF_1 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, C [auth B] | PF00757 | Furin-like cysteine rich region (Furin-like) | Furin-like cysteine rich region | - | Domain |
A, C [auth B] | PF01030 | Receptor L domain (Recep_L_domain) | Receptor L domain | - | Repeat |
A, C [auth B] | PF14843 | Growth factor receptor domain IV (GF_recep_IV) | Growth factor receptor domain IV | This is the fourth extracellular domain of receptor tyrosine protein kinases. Interaction between this domain and the furin-like domain (Pfam:PF00757) regulates the binding of ligands to the receptor L domains (Pfam:PF01030) [1]. | Domain |