Annotations: 7SOX

Cryo-electron tomography structure of membrane-bound EHD4 complex

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Membrane Protein Annotation: mpstruc

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
P	COQ9	e7soxP1	A: beta barrels	X: RNase A-like	H: Cytochrome P450	T: Cytochrome P450	F: COQ9	ECOD (v294.2)
O	COQ9	e7soxO1	A: beta barrels	X: RNase A-like	H: Cytochrome P450	T: Cytochrome P450	F: COQ9	ECOD (v294.2)
N	COQ9	e7soxN1	A: beta barrels	X: RNase A-like	H: Cytochrome P450	T: Cytochrome P450	F: COQ9	ECOD (v294.2)
M	COQ9	e7soxM1	A: beta barrels	X: RNase A-like	H: Cytochrome P450	T: Cytochrome P450	F: COQ9	ECOD (v294.2)
L	COQ9	e7soxL1	A: beta barrels	X: RNase A-like	H: Cytochrome P450	T: Cytochrome P450	F: COQ9	ECOD (v294.2)
K	COQ9	e7soxK1	A: beta barrels	X: RNase A-like	H: Cytochrome P450	T: Cytochrome P450	F: COQ9	ECOD (v294.2)
J	COQ9	e7soxJ1	A: beta barrels	X: RNase A-like	H: Cytochrome P450	T: Cytochrome P450	F: COQ9	ECOD (v294.2)
I	COQ9	e7soxI1	A: beta barrels	X: RNase A-like	H: Cytochrome P450	T: Cytochrome P450	F: COQ9	ECOD (v294.2)
H	COQ9	e7soxH1	A: beta barrels	X: RNase A-like	H: Cytochrome P450	T: Cytochrome P450	F: COQ9	ECOD (v294.2)
G	COQ9	e7soxG1	A: beta barrels	X: RNase A-like	H: Cytochrome P450	T: Cytochrome P450	F: COQ9	ECOD (v294.2)
F	COQ9	e7soxF1	A: beta barrels	X: RNase A-like	H: Cytochrome P450	T: Cytochrome P450	F: COQ9	ECOD (v294.2)
E	COQ9	e7soxE1	A: beta barrels	X: RNase A-like	H: Cytochrome P450	T: Cytochrome P450	F: COQ9	ECOD (v294.2)
D	COQ9	e7soxD1	A: beta barrels	X: RNase A-like	H: Cytochrome P450	T: Cytochrome P450	F: COQ9	ECOD (v294.2)
C	COQ9	e7soxC1	A: beta barrels	X: RNase A-like	H: Cytochrome P450	T: Cytochrome P450	F: COQ9	ECOD (v294.2)
B	COQ9	e7soxB1	A: beta barrels	X: RNase A-like	H: Cytochrome P450	T: Cytochrome P450	F: COQ9	ECOD (v294.2)
A	COQ9	e7soxA1	A: beta barrels	X: RNase A-like	H: Cytochrome P450	T: Cytochrome P450	F: COQ9	ECOD (v294.2)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P	PF12763	EH domain (EH)	EH domain	This entry represents the EH domain.	Domain
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P	PF16880	N-terminal EH-domain containing protein (EHD_N)	N-terminal EH-domain containing protein	-	Family
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P	PF00350	Dynamin family (Dynamin_N)	Dynamin family		Domain
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P	PF18150	Domain of unknown function (DUF5600) (DUF5600)	Domain of unknown function (DUF5600)	This domain can be found in EH-domain-containing ATPase 2 (EHD2) present in Mus musculus. The domain is helical in nature and has extensive contacts with the G-domain [1].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P	EH domain-containing protein 4	cation binding ion binding binding calcium ion binding metal ion binding small molecule binding guanyl nucleotide binding GTP binding nucleotide binding guanyl ribonucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding purine nucleotide binding cation binding ion binding binding calcium ion binding metal ion binding small molecule binding guanyl nucleotide binding GTP binding nucleotide binding guanyl ribonucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding purine nucleotide binding anion binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding protein-macromolecule adaptor activity molecular adaptor activity adenyl ribonucleotide binding adenyl nucleotide binding ATP binding	regulation of localization import into cell regulation of biological process regulation of cellular process regulation of cellular component organization regulation of transport transport biological regulation regulation of vesicle-mediated transport establishment of localization vesicle-mediated transport cellular component organization localization cellular process regulation of localization import into cell regulation of biological process regulation of cellular process regulation of cellular component organization regulation of transport transport biological regulation regulation of vesicle-mediated transport establishment of localization vesicle-mediated transport cellular component organization localization cellular process cellular component organization or biogenesis endocytosis regulation of endocytosis protein localization to cell periphery cellular localization protein localization to plasma membrane macromolecule localization intracellular protein localization localization within membrane protein localization to membrane developmental process multicellular organismal process cell migration involved in sprouting angiogenesis blood vessel morphogenesis tube development endothelial cell migration angiogenesis sprouting angiogenesis vasculature development circulatory system development anatomical structure morphogenesis multicellular organism development tube morphogenesis anatomical structure formation involved in morphogenesis anatomical structure development blood vessel endothelial cell migration cell migration cell motility blood vessel development system development organelle assembly plasma membrane bounded cell projection organization cell projection organization plasma membrane bounded cell projection assembly cellular component biogenesis organelle organization cellular component assembly cilium assembly cilium organization cell projection assembly cellular response to endogenous stimulus cellular response to growth factor stimulus response to stimulus response to endogenous stimulus response to growth factor protein-containing complex organization protein complex oligomerization protein-containing complex assembly protein homooligomerization pinocytosis intracellular transport endocytic recycling endosomal transport vesicle-mediated transport to the plasma membrane establishment of localization in cell	cell periphery cellular anatomical structure plasma membrane membrane membrane-bounded organelle intracellular anatomical structure intracellular vesicle intracellular membrane-bounded organelle intracellular organelle cytoplasmic vesicle organelle cytoplasm vesicle endocytic vesicle cell periphery cellular anatomical structure plasma membrane membrane membrane-bounded organelle intracellular anatomical structure intracellular vesicle intracellular membrane-bounded organelle intracellular organelle cytoplasmic vesicle organelle cytoplasm vesicle endocytic vesicle cell-cell junction adherens junction anchoring junction cell junction early endosome endosome endomembrane system endosome membrane recycling endosome cytoplasmic vesicle membrane bounding membrane of organelle recycling endosome membrane vesicle membrane organelle membrane early endosome membrane perinuclear region of cytoplasm endoplasmic reticulum

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P	IPR000261	EH domain	Domain
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P	IPR045063	Dynamin, N-terminal	Domain
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P	IPR030381	Dynamin-type guanine nucleotide-binding (G) domain	Domain
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P	IPR040990	Domain of unknown function DUF5600	Domain
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P	IPR002048	EF-hand domain	Domain
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P	IPR011992	EF-hand domain pair	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P	IPR018247	EF-Hand 1, calcium-binding site	Binding Site
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P	IPR031692	EH domain-containing protein, N-terminal	Domain

Membrane Protein Annotation: mpstruc mpstruc Database Homepage

Chains	Resource Link	Group	Subgroup	Protein
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P	mpstruc	MONOTOPIC MEMBRANE PROTEINS	Membrane-Shaping Proteins (monotopic)	Eps15-homology domain containing proteins (EHDs), EHD4 complex

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.