7RR5

Structure of ribosomal complex bound with Rbg1/Tma46


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
J [auth LG]SCOP2B SuperfamilyL30e-like 8063962 3001739 SCOP2B (2022-06-29)
P [auth LN]SCOP2B SuperfamilyRibosomal proteins S24e, L23 and L15e 8082481 3000210 SCOP2B (2022-06-29)
T [auth LR]SCOP2B SuperfamilyRibosomal protein L19 (L19e) 8077485 3000890 SCOP2B (2022-06-29)
W [auth LU]SCOP2 Family60S Ribosomal protein L22e 8105637 4006528 SCOP2 (2022-06-29)
W [auth LU]SCOP2 Superfamily60S Ribosomal protein L22e 8105638 3002158 SCOP2 (2022-06-29)
X [auth LV]SCOP2 FamilyRibosomal protein L14 8105627 4001826 SCOP2 (2022-06-29)
X [auth LV]SCOP2 Superfamily50S Ribosomal protein L14-like 8105628 3000433 SCOP2 (2022-06-29)
AA [auth LY]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8076760 3000334 SCOP2B (2022-06-29)
CA [auth La]SCOP2 FamilyRibosomal proteins L15p and L18e 8105629 4003555 SCOP2 (2022-06-29)
CA [auth La]SCOP2 SuperfamilyRibosomal proteins L15p and L18e 8105630 3001045 SCOP2 (2022-06-29)
EA [auth Lc]SCOP2B SuperfamilyL30e-like 8039862 3001739 SCOP2B (2022-06-29)
KA [auth Li]SCOP2B SuperfamilyRibosomal protein L36e 8053115 3002161 SCOP2B (2022-06-29)
RA [auth Lp]SCOP2B SuperfamilyZn-binding ribosomal proteins 8103126 3001320 SCOP2B (2022-06-29)
VA [auth SA]SCOP2 FamilyRibosomal protein S2-like 8105635 4003744 SCOP2 (2022-06-29)
VA [auth SA]SCOP2 SuperfamilySIS domain/Ribosomal protein S2-like 8105636 3001397 SCOP2 (2022-06-29)
AB [auth SF]SCOP2B SuperfamilyRibosomal protein S7 8065999 3000799 SCOP2B (2022-06-29)
JB [auth SO]SCOP2 FamilyRibosomal protein L18p and S11 8105625 4000555 SCOP2 (2022-06-29)
JB [auth SO]SCOP2 SuperfamilyTranslational machinery components 8105626 3000571 SCOP2 (2022-06-29)
LB [auth SQ]SCOP2 FamilyTranslational machinery components 8105623 4000951 SCOP2 (2022-06-29)
LB [auth SQ]SCOP2 SuperfamilyRibosomal protein S5 domain 2-like 8105624 3000100 SCOP2 (2022-06-29)
NB [auth SS]SCOP2 FamilyRibosomal protein S13 8105643 4000260 SCOP2 (2022-06-29)
NB [auth SS]SCOP2 SuperfamilyS13-like H2TH domain 8105644 3000053 SCOP2 (2022-06-29)
QB [auth SV]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8053136 3000068 SCOP2B (2022-06-29)
ZB [auth Se]SCOP2 FamilyRibosomal protein S30e-like 8105639 4005067 SCOP2 (2022-06-29)
ZB [auth Se]SCOP2 SuperfamilyRibosomal protein S30e-like 8105640 3002190 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
J [auth LG]Ribosomal_L7Ae_1e7rr5LG1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: Ribosomal_L7Ae_1ECOD (1.6)
K [auth LH]Ribosomal_L6_2e7rr5LH1 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6_2ECOD (1.6)
K [auth LH]Ribosomal_L6e7rr5LH2 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6ECOD (1.6)
L [auth LI]Ribosomal_L16e7rr5LI1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: Ribosomal_L16ECOD (1.6)
M [auth LJ]Ribosomal_L5_Ce7rr5LJ1 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: Ribosomal_L5_CECOD (1.6)
N [auth LL]Ribosomal_L13ee7rr5LL1 A: extended segmentsX: RPL13 (From Topology)H: RPL13 (From Topology)T: RPL13F: Ribosomal_L13eECOD (1.6)
O [auth LM]Ribosomal_L14ee7rr5LM1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L14eECOD (1.6)
P [auth LN]Ribosomal_L15ee7rr5LN1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_L15eECOD (1.6)
Q [auth LO]Ribosomal_L13e7rr5LO1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: Ribosomal_L13ECOD (1.6)
R [auth LP]Ribosomal_L22e7rr5LP1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: Ribosomal_L22ECOD (1.6)
S [auth LQ]Ribosomal_L18e7rr5LQ1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: Ribosomal_L18ECOD (1.6)
T [auth LR]Ribosomal_L19e_Ne7rr5LR2 A: alpha arraysX: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)H: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)T: Ribosomal protein L19 (L19e) N-terminal domainF: Ribosomal_L19e_NECOD (1.6)
T [auth LR]Ribosomal_L19e_Ce7rr5LR1 A: alpha bundlesX: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)H: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)T: Ribosomal protein L19 (L19e) C-terminal domainF: Ribosomal_L19e_CECOD (1.6)
U [auth LS]Ribosomal_L18Ae7rr5LS1 A: a+b two layersX: GP2-likeH: RplX-like (From Topology)T: RplX-likeF: Ribosomal_L18AECOD (1.6)
V [auth LT]Ribosomal_L21ee7rr5LT1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L21eECOD (1.6)
W [auth LU]Ribosomal_L22ee7rr5LU1 A: a+b two layersX: Ribosomal protein L22e (From Topology)H: Ribosomal protein L22e (From Topology)T: Ribosomal protein L22eF: Ribosomal_L22eECOD (1.6)
X [auth LV]Ribosomal_L14e7rr5LV1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_L14ECOD (1.6)
Y [auth LW]Ribosomal_L24ee7rr5LW1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_L24eECOD (1.6)
Z [auth LX]Ribosomal_L23_3e7rr5LX1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_L23_3ECOD (1.6)
AA [auth LY]Ribosomal_L26e7rr5LY1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L26ECOD (1.6)
BA [auth LZ]Ribosomal_L27ee7rr5LZ1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L27eECOD (1.6)
CA [auth La]Ribosomal_L18e7rr5La1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: Ribosomal_L18ECOD (1.6)
DA [auth Lb]Ribosomal_L29ee7rr5Lb1 A: extended segmentsX: RPL29 (From Topology)H: RPL29 (From Topology)T: RPL29F: Ribosomal_L29eECOD (1.6)
EA [auth Lc]Ribosomal_L7Aee7rr5Lc1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: Ribosomal_L7AeECOD (1.6)
FA [auth Ld]Ribosomal_L31ee7rr5Ld1 A: a+b two layersX: Ribosomal protein L31e-likeH: Ribosomal protein L31e/gp120 outer domain (From Topology)T: Ribosomal protein L31e/gp120 outer domainF: Ribosomal_L31eECOD (1.6)
GA [auth Le]Ribosomal_L32ee7rr5Le1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L32e (From Topology)T: Ribosomal protein L32eF: Ribosomal_L32eECOD (1.6)
HA [auth Lf]Ribosomal_L35Aee7rr5Lf1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Ribosomal_L35AeECOD (1.6)
IA [auth Lg]Ribosomal_L34ee7rr5Lg1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: RPL34 (From Topology)T: RPL34F: Ribosomal_L34eECOD (1.6)
JA [auth Lh]Ribosomal_L29_2e7rr5Lh1 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: Ribosomal_L29_2ECOD (1.6)
KA [auth Li]Ribosomal_L36ee7rr5Li1 A: alpha arraysX: 60S ribosomal protein rpL36 (L36e) (From Topology)H: 60S ribosomal protein rpL36 (L36e) (From Topology)T: 60S ribosomal protein rpL36 (L36e)F: Ribosomal_L36eECOD (1.6)
LA [auth Lj]Ribosomal_L37ee7rr5Lj1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L37eECOD (1.6)
MA [auth Lk]Ribosomal_L38ee7rr5Lk1 A: a+b two layersX: SRP9/14-likeH: Signal recognition particle alu RNA binding heterodimer SRP9/14-related (From Topology)T: Signal recognition particle alu RNA binding heterodimer SRP9/14-relatedF: Ribosomal_L38eECOD (1.6)
D [auth LA]Ribosomal_L2_1e7rr5LA2 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_L2_1ECOD (1.6)
D [auth LA]Ribosomal_L2_C_2e7rr5LA1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L2_C_2ECOD (1.6)
NA [auth Ll]Ribosomal_L39e7rr5Ll1 A: extended segmentsX: Ribosomal protein L39e (From Topology)H: Ribosomal protein L39e (From Topology)T: Ribosomal protein L39eF: Ribosomal_L39ECOD (1.6)
OA [auth Lm]Ribosomal_L40ee7rr5Lm1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L40eECOD (1.6)
PA [auth Ln]Ribosomal_L41e7rr5Ln1 A: extended segmentsX: Ribosomal protein L41-A (From Topology)H: Ribosomal protein L41-A (From Topology)T: Ribosomal protein L41-AF: Ribosomal_L41ECOD (1.6)
QA [auth Lo]Ribosomal_L44e7rr5Lo1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L44ECOD (1.6)
RA [auth Lp]Ribosomal_L37aee7rr5Lp1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L37aeECOD (1.6)
SA [auth P0]Ribosomal_L10e7rr5P02 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein L10-like (From Topology)T: Ribosomal protein L10-likeF: Ribosomal_L10ECOD (1.6)
SA [auth P0]Ribosomal_P0_L10ee7rr5P01 A: a+b two layersX: Insertion domain in 60S ribosomal protein rpP0 (L10P) (From Topology)H: Insertion domain in 60S ribosomal protein rpP0 (L10P) (From Topology)T: Insertion domain in 60S ribosomal protein rpP0 (L10P)F: Ribosomal_P0_L10eECOD (1.6)
TA [auth P2]Ribosomal_L11,KOG0886e7rr5P21 A: alpha arraysX: HTHH: HTHT: Ribosomal protein L11, C-terminal domainF: Ribosomal_L11,KOG0886ECOD (1.6)
VA [auth SA]Ribosomal_S2_2e7rr5SA1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: Ribosomal_S2_2ECOD (1.6)
WA [auth SB]Ribosomal_S3Ae_Ne7rr5SB2 A: beta barrelsX: Ribosomal protein L25-likeH: 40S ribosomal protein S3A N-terminal domain (From Topology)T: 40S ribosomal protein S3A N-terminal domainF: Ribosomal_S3Ae_NECOD (1.6)
WA [auth SB]Ribosomal_S3Ae_Ce7rr5SB1 A: a+b two layersX: T-foldH: 40S ribosomal protein S3A C-terminal domain (From Topology)T: 40S ribosomal protein S3A C-terminal domainF: Ribosomal_S3Ae_CECOD (1.6)
E [auth LB]Ribosomal_L3e7rr5LB1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Ribosomal_L3ECOD (1.6)
XA [auth SC]Ribosomal_S5_C_1e7rr5SC3 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S5_C_1ECOD (1.6)
XA [auth SC]Ribosomal_S5_3e7rr5SC2 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: Ribosomal_S5_3ECOD (1.6)
XA [auth SC]Ribosomal_S5_2e7rr5SC1 A: extended segmentsX: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)H: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)T: N-terminal region in 40S ribosomal protein rpS2 (S5p)F: Ribosomal_S5_2ECOD (1.6)
YA [auth SD]Ribosomal_S3_Ce7rr5SD2 A: a+b two layersX: T-foldH: Ribosomal protein S3-C (From Topology)T: Ribosomal protein S3-CF: Ribosomal_S3_CECOD (1.6)
YA [auth SD]KH_2_3e7rr5SD1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: KH_2_3ECOD (1.6)
ZA [auth SE]Ribosomal_S4ee7rr5SE2 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S4eECOD (1.6)
ZA [auth SE]40S_S4_Ce7rr5SE1 A: beta barrelsX: SH3H: SH3T: SH3F: 40S_S4_CECOD (1.6)
ZA [auth SE]RS4NTe7rr5SE3 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: RS4NTECOD (1.6)
AB [auth SF]Ribosomal_S7_1e7rr5SF1 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: Ribosomal_S7_1ECOD (1.6)
BB [auth SG]Ribosomal_S6ee7rr5SG1 A: beta barrelsX: Ribosomal protein L25-likeH: Ribosomal protein L25-like (From Topology)T: Ribosomal protein L25-likeF: Ribosomal_S6eECOD (1.6)
CB [auth SH]Ribosomal_S7e_Ne7rr5SH1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: 40S ribosomal protein S7-A (From Topology)T: 40S ribosomal protein S7-AF: Ribosomal_S7e_NECOD (1.6)
CB [auth SH]Ribosomal_S7e_C_2e7rr5SH2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: 40S ribosomal protein S7-A (From Topology)T: 40S ribosomal protein S7-AF: Ribosomal_S7e_C_2ECOD (1.6)
DB [auth SI]Ribosomal_S8ee7rr5SI1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_S8eECOD (1.6)
EB [auth SJ]S4e7rr5SJ1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: S4ECOD (1.6)
FB [auth SK]S10_plectine7rr5SK1 A: alpha arraysX: HTHH: HTHT: wingedF: S10_plectinECOD (1.6)
GB [auth SL]Ribosomal_S17_1e7rr5SL1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S17_1ECOD (1.6)
F [auth LC]Ribosomal_L4e7rr5LC1 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: Ribosomal_L4ECOD (1.6)
F [auth LC]Ribos_L4_asso_Ce7rr5LC2 A: extended segmentsX: C-terminal helical region in 60S ribosomal protein L4 (L4p) (From Topology)H: C-terminal helical region in 60S ribosomal protein L4 (L4p) (From Topology)T: C-terminal helical region in 60S ribosomal protein L4 (L4p)F: Ribos_L4_asso_CECOD (1.6)
HB [auth SM]Ribosomal_L7Aee7rr5SM1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: Ribosomal_L7AeECOD (1.6)
IB [auth SN]Ribosomal_S13_Ne7rr5SN1 A: alpha arraysX: HTHH: 40S ribosomal protein S13 N-terminal domain (From Topology)T: 40S ribosomal protein S13 N-terminal domainF: Ribosomal_S13_NECOD (1.6)
IB [auth SN]Ribosomal_S15_2e7rr5SN2 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: Ribosomal_S15_2ECOD (1.6)
JB [auth SO]Ribosomal_S11e7rr5SO1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_S11ECOD (1.6)
KB [auth SP]Ribosomal_S19e7rr5SP1 A: a+b two layersX: Ribosomal protein S19 (From Topology)H: Ribosomal protein S19 (From Topology)T: Ribosomal protein S19F: Ribosomal_S19ECOD (1.6)
LB [auth SQ]Ribosomal_S9e7rr5SQ1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S9ECOD (1.6)
MB [auth SR]Ribosomal_S17ee7rr5SR1 A: alpha arraysX: HTHH: HTHT: FF domainF: Ribosomal_S17eECOD (1.6)
NB [auth SS]Ribosomal_S13e7rr5SS1 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: Ribosomal_S13ECOD (1.6)
OB [auth ST]Ribosomal_S19ee7rr5ST1 A: alpha arraysX: HTHH: HTHT: wingedF: Ribosomal_S19eECOD (1.6)
PB [auth SU]Ribosomal_S10_1e7rr5SU1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: Ribosomal_S10_1ECOD (1.6)
QB [auth SV]Ribosomal_S21ee7rr5SV1 A: a+b two layersX: 40S ribosomal protein rpS21 (S21e) (From Topology)H: 40S ribosomal protein rpS21 (S21e) (From Topology)T: 40S ribosomal protein rpS21 (S21e)F: Ribosomal_S21eECOD (1.6)
G [auth LD]Ribosomal_L5ee7rr5LD1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_L5eECOD (1.6)
RB [auth SW]Ribosomal_S8_N_1e7rr5SW2 A: a+b two layersX: R3H domain-likeH: Ribosomal protein S8, N-terminal domain (From Topology)T: Ribosomal protein S8, N-terminal domainF: Ribosomal_S8_N_1ECOD (1.6)
RB [auth SW]Ribosomal_S8_C_1e7rr5SW1 A: a+b two layersX: Ribosomal protein S8, C-terminal domain (From Topology)H: Ribosomal protein S8, C-terminal domain (From Topology)T: Ribosomal protein S8, C-terminal domainF: Ribosomal_S8_C_1ECOD (1.6)
SB [auth SX]Ribosom_S12_S23e7rr5SX1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosom_S12_S23ECOD (1.6)
TB [auth SY]Ribosomal_S24ee7rr5SY1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_S24eECOD (1.6)
UB [auth SZ]Ribosomal_S25e7rr5SZ1 A: alpha arraysX: HTHH: HTHT: wingedF: Ribosomal_S25ECOD (1.6)
VB [auth Sa]Ribosomal_S26ee7rr5Sa1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_S26eECOD (1.6)
WB [auth Sb]Ribosomal_S27ee7rr5Sb1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_S27eECOD (1.6)
XB [auth Sc]Ribosomal_S28ee7rr5Sc1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S28eECOD (1.6)
YB [auth Sd]Ribosomal_S14_2e7rr5Sd1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_S14_2ECOD (1.6)
ZB [auth Se]Ribosomal_S30e7rr5Se1 A: extended segmentsX: 40S ribosomal protein S30 (S30e) (From Topology)H: 40S ribosomal protein S30 (S30e) (From Topology)T: 40S ribosomal protein S30 (S30e)F: Ribosomal_S30ECOD (1.6)
AC [auth Sf]Ribosomal_S27e7rr5Sf1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_S27ECOD (1.6)
H [auth LE]Ribosomal_L6ee7rr5LE1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L6eECOD (1.6)
BC [auth Sg]ANAPC4_WD40_2e7rr5Sg1 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 8-bladedF: ANAPC4_WD40_2ECOD (1.6)
FC [auth 5]eIF-5ae7rr552 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: eIF-5aECOD (1.6)
FC [auth 5]EFP_N_1e7rr551 A: beta barrelsX: SH3H: SH3T: SH3F: EFP_N_1ECOD (1.6)
GC [auth R]TGSe7rr5R2 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Ubiquitin-likeF: TGSECOD (1.6)
GC [auth R]MnmE_helical_2nde7rr5R1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: MnmE_helical_2ndECOD (1.6)
HC [auth T]F_UNCLASSIFIEDe7rr5T2 A: few secondary structure elementsX: CCCH zinc fingerH: CCCH zinc finger (From Topology)T: CCCH zinc fingerF: F_UNCLASSIFIEDECOD (1.6)
HC [auth T]DFRP_Ce7rr5T1 A: extended segmentsX: Translation machinery-associated protein 46 DFRP domain (From Topology)H: Translation machinery-associated protein 46 DFRP domain (From Topology)T: Translation machinery-associated protein 46 DFRP domainF: DFRP_CECOD (1.6)
I [auth LF]Ribosomal_L30_1e7rr5LF1 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: Ribosomal_L30_1ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
J [auth LG]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
K [auth LH]PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6- Domain
L [auth LI]PF01158Ribosomal protein L36e (Ribosomal_L36e)Ribosomal protein L36e- Family
O [auth LM]PF01929Ribosomal protein L14 (Ribosomal_L14e)Ribosomal protein L14- Family
O [auth LM]PF00467KOW motif (KOW)KOW motif- Family
P [auth LN]PF05162Ribosomal protein L41 (Ribosomal_L41)Ribosomal protein L41- Family
P [auth LN]PF00827Ribosomal L15 (Ribosomal_L15e)Ribosomal L15- Family
R [auth LP]PF01780Ribosomal L37ae protein family (Ribosomal_L37ae)Ribosomal L37ae protein family- Family
T [auth LR]PF01280Ribosomal protein L19e (Ribosomal_L19e)Ribosomal protein L19e- Family
U [auth LS]PF01775Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A (Ribosomal_L18A)Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18AThis family includes: archaeal 50S ribosomal protein L18Ae, often referred to as L20e or LX; fungal 60S ribosomal protein L20; and higher eukaryote 60S ribosomal protein L18A.Domain
AA [auth LY]PF16906Ribosomal proteins L26 eukaryotic, L24P archaeal (Ribosomal_L26)Ribosomal proteins L26 eukaryotic, L24P archaeal- Family
AA [auth LY]PF00467KOW motif (KOW)KOW motif- Family
WA [auth SB]PF01667Ribosomal protein S27 (Ribosomal_S27e)Ribosomal protein S27- Family
AB [auth SF]PF00177Ribosomal protein S7p/S5e (Ribosomal_S7)Ribosomal protein S7p/S5eThis family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes.Domain
QB [auth SV]PF01249Ribosomal protein S21e (Ribosomal_S21e)Ribosomal protein S21e- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth C1]25S rRNA---
J [auth LG]60S ribosomal protein L8-A
K [auth LH]60S ribosomal protein L9-A
L [auth LI]RPL10 isoform 1---
M [auth LJ]RPL11B isoform 1---
N [auth LL]60S ribosomal protein L13---
O [auth LM]60S ribosomal protein L14-A
P [auth LN]60S ribosomal protein L15-A
Q [auth LO]60S ribosomal protein L16-A---
R [auth LP]60S ribosomal protein L17-A---
S [auth LQ]60S ribosomal protein L18-B---
B [auth C4]5S rRNA---
T [auth LR]60S ribosomal protein L19-A
U [auth LS]60S ribosomal protein L20-A
V [auth LT]60S ribosomal protein L21-A---
W [auth LU]60S ribosomal protein L22-A---
X [auth LV]60S ribosomal protein L23-B---
Y [auth LW]RPL24A isoform 1---
Z [auth LX]60S ribosomal protein L25---
AA [auth LY]60S ribosomal protein L26-A
BA [auth LZ]60S ribosomal protein L27---
CA [auth La]60S ribosomal protein L28---
C [auth C3]5.8S rRNA---
DA [auth Lb]RPL29 isoform 1---
EA [auth Lc]60S ribosomal protein L30
FA [auth Ld]60S ribosomal protein L31-A---
GA [auth Le]RPL32 isoform 1---
HA [auth Lf]60S ribosomal protein L33-A---
IA [auth Lg]60S ribosomal protein L34-A---
JA [auth Lh]60S ribosomal protein L35-A---
KA [auth Li]60S ribosomal protein L36-A
LA [auth Lj]Ribosomal protein L37---
MA [auth Lk]RPL38 isoform 1---
D [auth LA]60S ribosomal protein L2-B---
NA [auth Ll]60S ribosomal protein L39---
OA [auth Lm]Ubiquitin-60S ribosomal protein L40---
PA [auth Ln]60S ribosomal protein L41-A
QA [auth Lo]60S ribosomal protein L42-A---
RA [auth Lp]60S ribosomal protein L43-A
SA [auth P0]RPP0 isoform 1---
TA [auth P2]RPL12A isoform 1---
UA [auth C2]18S rRNA---
VA [auth SA]40S ribosomal protein S0---
WA [auth SB]RPS1A isoform 1---
E [auth LB]RPL3 isoform 1---
XA [auth SC]RPS2 isoform 1---
YA [auth SD]RPS3 isoform 1---
ZA [auth SE]40S ribosomal protein S4---
AB [auth SF]Rps5p
BB [auth SG]40S ribosomal protein S6---
CB [auth SH]40S ribosomal protein S7---
DB [auth SI]RPS8A isoform 1---
EB [auth SJ]40S ribosomal protein S9-A---
FB [auth SK]40S ribosomal protein S10-A---
GB [auth SL]40S ribosomal protein S11-B---
F [auth LC]RPL4A isoform 1---
HB [auth SM]40S ribosomal protein S12---
IB [auth SN]40S ribosomal protein S13---
JB [auth SO]40S ribosomal protein S14-B---
KB [auth SP]RPS15 isoform 1---
LB [auth SQ]40S ribosomal protein S16-A---
MB [auth SR]40S ribosomal protein S17-A---
NB [auth SS]40S ribosomal protein S18-B---
OB [auth ST]40S ribosomal protein S19-A---
PB [auth SU]RPS20 isoform 1---
QB [auth SV]40S ribosomal protein S21-A
G [auth LD]RPL5 isoform 1---
RB [auth SW]RPS22A isoform 1---
SB [auth SX]40S ribosomal protein S23---
TB [auth SY]40S ribosomal protein S24---
UB [auth SZ]RPS25A isoform 1---
VB [auth Sa]RPS26B isoform 1---
WB [auth Sb]40S ribosomal protein S27-A
XB [auth Sc]RPS28A isoform 1---
YB [auth Sd]RPS29A isoform 1---
ZB [auth Se]40S ribosomal protein S30---
AC [auth Sf]Ubiquitin-40S ribosomal protein S31---
H [auth LE]60S ribosomal protein L6---
BC [auth Sg]Guanine nucleotide-binding protein subunit beta-like protein---
CC [auth A]A-tRNA---
DC [auth P]P-tRNA---
EC [auth m]mRNA---
FC [auth 5]Eukaryotic translation initiation factor 5A---
GC [auth R]Ribosome-interacting GTPase 1---
HC [auth T]Translation machinery-associated protein 46---
IC [auth L1]60S ribosomal protein L1---
I [auth LF]60S ribosomal protein L7-A---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
J [auth LG]IPR001921Large ribosomal subunit protein eL8Family
J [auth LG]IPR050257Eukaryotic ribosomal RNA-processing and assembly proteinFamily
J [auth LG]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
J [auth LG]IPR004037Large ribosomal subunit protein eL8-like, conserved siteConserved Site
J [auth LG]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
J [auth LG]IPR018492Ribosomal protein eL8/Nhp2 familyFamily
K [auth LH]IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
K [auth LH]IPR002359Large ribosomal subunit protein uL6, conserved site-2Conserved Site
K [auth LH]IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
K [auth LH]IPR000702Large ribosomal subunit protein uL6-likeFamily
O [auth LM]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
O [auth LM]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
O [auth LM]IPR039660Large ribosomal subunit protein eL14Family
O [auth LM]IPR041985Large ribosomal subunit protein eL14, KOW motifDomain
O [auth LM]IPR002784Large ribosomal subunit protein eL14 domainDomain
O [auth LM]IPR005824KOWDomain
P [auth LN]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
P [auth LN]IPR020925Large ribosomal subunit protein eL15, conserved siteConserved Site
P [auth LN]IPR024794Large ribosomal subunit protein eL15 core domain superfamilyHomologous Superfamily
P [auth LN]IPR000439Large ribosomal subunit protein eL15Family
T [auth LR]IPR015972Large ribosomal subunit protein eL19, domain 1Homologous Superfamily
T [auth LR]IPR039547Large ribosomal subunit protein eL19Family
T [auth LR]IPR023638Large ribosomal subunit protein eL19, conserved siteConserved Site
T [auth LR]IPR035970Large ribosomal subunit protein eL19 superfamilyHomologous Superfamily
T [auth LR]IPR000196Large ribosomal subunit protein eL19 domainDomain
T [auth LR]IPR033935Large ribosomal subunit protein eL19, eukaryoticDomain
U [auth LS]IPR028877Large ribosomal subunit protein eL20Family
U [auth LS]IPR023573Large ribosomal subunit protein eL20 domainDomain
U [auth LS]IPR021138Large ribosomal subunit protein eL20, eukaryotesFamily
AA [auth LY]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
AA [auth LY]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
AA [auth LY]IPR005824KOWDomain
AA [auth LY]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
AA [auth LY]IPR005756Large ribosomal subunit protein uL24, eukaryotic/archaealFamily
AA [auth LY]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
EA [auth Lc]IPR022991Large ribosomal subunit protein eL30, conserved siteConserved Site
EA [auth Lc]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
EA [auth Lc]IPR039109Large ribosomal subunit protein eL30-likeFamily
EA [auth Lc]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
KA [auth Li]IPR000509Large ribosomal subunit protein eL36Family
KA [auth Li]IPR038097Large ribosomal subunit protein eL36 domain superfamilyHomologous Superfamily
PA [auth Ln]IPR007836Large ribosomal subunit protein eS32Family
RA [auth Lp]IPR002674Large ribosomal subunit protein eL43Family
RA [auth Lp]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
RA [auth Lp]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
RA [auth Lp]IPR050522Eukaryotic ribosomal protein eL43Family
AB [auth SF]IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
AB [auth SF]IPR000235Small ribosomal subunit protein uS7Family
AB [auth SF]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
AB [auth SF]IPR023798Small ribosomal subunit protein uS7 domainDomain
AB [auth SF]IPR005716Ribosomal protein uS7, eukaryotic/archaealFamily
QB [auth SV]IPR038579Small ribosomal subunit protein eS21 superfamilyHomologous Superfamily
QB [auth SV]IPR018279Small ribosomal subunit protein eS21, conserved siteConserved Site
QB [auth SV]IPR001931Small ribosomal subunit protein eS21Family
WB [auth Sb]IPR023407Small ribosomal subunit protein eS27, zinc-binding domain superfamilyHomologous Superfamily
WB [auth Sb]IPR000592Small ribosomal subunit protein eS27Family
WB [auth Sb]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily