7RL1 | pdb_00007rl1

AAVrh.10-7x capsid


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ZA [auth z]SCOP2B SuperfamilyssDNA viruses 8093910 3000931 SCOP2B (2022-06-29)
ZSCOP2B SuperfamilyssDNA viruses 8093910 3000931 SCOP2B (2022-06-29)
YA [auth y]SCOP2B SuperfamilyssDNA viruses 8093910 3000931 SCOP2B (2022-06-29)
YSCOP2B SuperfamilyssDNA viruses 8093910 3000931 SCOP2B (2022-06-29)
XA [auth x]SCOP2B SuperfamilyssDNA viruses 8093910 3000931 SCOP2B (2022-06-29)
XSCOP2B SuperfamilyssDNA viruses 8093910 3000931 SCOP2B (2022-06-29)
WA [auth w]SCOP2B SuperfamilyssDNA viruses 8093910 3000931 SCOP2B (2022-06-29)
WSCOP2B SuperfamilyssDNA viruses 8093910 3000931 SCOP2B (2022-06-29)
VA [auth v]SCOP2B SuperfamilyssDNA viruses 8093910 3000931 SCOP2B (2022-06-29)
VSCOP2B SuperfamilyssDNA viruses 8093910 3000931 SCOP2B (2022-06-29)
UA [auth u]SCOP2B SuperfamilyssDNA viruses 8093910 3000931 SCOP2B (2022-06-29)
USCOP2B SuperfamilyssDNA viruses 8093910 3000931 SCOP2B (2022-06-29)
TA [auth t]SCOP2B SuperfamilyssDNA viruses 8093910 3000931 SCOP2B (2022-06-29)
TSCOP2B SuperfamilyssDNA viruses 8093910 3000931 SCOP2B (2022-06-29)
SA [auth s]SCOP2B SuperfamilyssDNA viruses 8093910 3000931 SCOP2B (2022-06-29)
SSCOP2B SuperfamilyssDNA viruses 8093910 3000931 SCOP2B (2022-06-29)
RA [auth r]SCOP2B SuperfamilyssDNA viruses 8093910 3000931 SCOP2B (2022-06-29)
RSCOP2B SuperfamilyssDNA viruses 8093910 3000931 SCOP2B (2022-06-29)
QA [auth q]SCOP2B SuperfamilyssDNA viruses 8093910 3000931 SCOP2B (2022-06-29)
QSCOP2B SuperfamilyssDNA viruses 8093910 3000931 SCOP2B (2022-06-29)
PA [auth p]SCOP2B SuperfamilyssDNA viruses 8093910 3000931 SCOP2B (2022-06-29)
PSCOP2B SuperfamilyssDNA viruses 8093910 3000931 SCOP2B (2022-06-29)
OA [auth o]SCOP2B SuperfamilyssDNA viruses 8093910 3000931 SCOP2B (2022-06-29)
OSCOP2B SuperfamilyssDNA viruses 8093910 3000931 SCOP2B (2022-06-29)
NA [auth n]SCOP2B SuperfamilyssDNA viruses 8093910 3000931 SCOP2B (2022-06-29)
NSCOP2B SuperfamilyssDNA viruses 8093910 3000931 SCOP2B (2022-06-29)
MA [auth m]SCOP2B SuperfamilyssDNA viruses 8093910 3000931 SCOP2B (2022-06-29)
MSCOP2B SuperfamilyssDNA viruses 8093910 3000931 SCOP2B (2022-06-29)
LA [auth l]SCOP2B SuperfamilyssDNA viruses 8093910 3000931 SCOP2B (2022-06-29)
LSCOP2B SuperfamilyssDNA viruses 8093910 3000931 SCOP2B (2022-06-29)
KA [auth k]SCOP2B SuperfamilyssDNA viruses 8093910 3000931 SCOP2B (2022-06-29)
KSCOP2B SuperfamilyssDNA viruses 8093910 3000931 SCOP2B (2022-06-29)
JA [auth j]SCOP2B SuperfamilyssDNA viruses 8093910 3000931 SCOP2B (2022-06-29)
JSCOP2B SuperfamilyssDNA viruses 8093910 3000931 SCOP2B (2022-06-29)
IA [auth i]SCOP2B SuperfamilyssDNA viruses 8093910 3000931 SCOP2B (2022-06-29)
ISCOP2B SuperfamilyssDNA viruses 8093910 3000931 SCOP2B (2022-06-29)
HB [auth 8]SCOP2B SuperfamilyssDNA viruses 8093910 3000931 SCOP2B (2022-06-29)
HA [auth h]SCOP2B SuperfamilyssDNA viruses 8093910 3000931 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyssDNA viruses 8093910 3000931 SCOP2B (2022-06-29)
GB [auth 7]SCOP2B SuperfamilyssDNA viruses 8093910 3000931 SCOP2B (2022-06-29)
GA [auth g]SCOP2B SuperfamilyssDNA viruses 8093910 3000931 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyssDNA viruses 8093910 3000931 SCOP2B (2022-06-29)
FB [auth 6]SCOP2B SuperfamilyssDNA viruses 8093910 3000931 SCOP2B (2022-06-29)
FA [auth f]SCOP2B SuperfamilyssDNA viruses 8093910 3000931 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyssDNA viruses 8093910 3000931 SCOP2B (2022-06-29)
EB [auth 5]SCOP2B SuperfamilyssDNA viruses 8093910 3000931 SCOP2B (2022-06-29)
EA [auth e]SCOP2B SuperfamilyssDNA viruses 8093910 3000931 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyssDNA viruses 8093910 3000931 SCOP2B (2022-06-29)
DB [auth 4]SCOP2B SuperfamilyssDNA viruses 8093910 3000931 SCOP2B (2022-06-29)
DA [auth d]SCOP2B SuperfamilyssDNA viruses 8093910 3000931 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyssDNA viruses 8093910 3000931 SCOP2B (2022-06-29)
CB [auth 3]SCOP2B SuperfamilyssDNA viruses 8093910 3000931 SCOP2B (2022-06-29)
CA [auth c]SCOP2B SuperfamilyssDNA viruses 8093910 3000931 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyssDNA viruses 8093910 3000931 SCOP2B (2022-06-29)
BB [auth 2]SCOP2B SuperfamilyssDNA viruses 8093910 3000931 SCOP2B (2022-06-29)
BA [auth b]SCOP2B SuperfamilyssDNA viruses 8093910 3000931 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyssDNA viruses 8093910 3000931 SCOP2B (2022-06-29)
AB [auth 1]SCOP2B SuperfamilyssDNA viruses 8093910 3000931 SCOP2B (2022-06-29)
AA [auth a]SCOP2B SuperfamilyssDNA viruses 8093910 3000931 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyssDNA viruses 8093910 3000931 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ZA [auth z]Trypsine7rl1z1 A: beta barrelsX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (v294.2)
ZTrypsine7rl1Z1 A: beta barrelsX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (v294.2)
YA [auth y]Trypsine7rl1y1 A: beta barrelsX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (v294.2)
YTrypsine7rl1Y1 A: beta barrelsX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (v294.2)
XA [auth x]Trypsine7rl1x1 A: beta barrelsX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (v294.2)
XTrypsine7rl1X1 A: beta barrelsX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (v294.2)
WA [auth w]Trypsine7rl1w1 A: beta barrelsX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (v294.2)
WTrypsine7rl1W1 A: beta barrelsX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (v294.2)
VA [auth v]Trypsine7rl1v1 A: beta barrelsX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (v294.2)
VTrypsine7rl1V1 A: beta barrelsX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (v294.2)
UA [auth u]Trypsine7rl1u1 A: beta barrelsX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (v294.2)
UTrypsine7rl1U1 A: beta barrelsX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (v294.2)
TA [auth t]Trypsine7rl1t1 A: beta barrelsX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (v294.2)
TTrypsine7rl1T1 A: beta barrelsX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (v294.2)
SA [auth s]Trypsine7rl1s1 A: beta barrelsX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (v294.2)
STrypsine7rl1S1 A: beta barrelsX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (v294.2)
RA [auth r]Trypsine7rl1r1 A: beta barrelsX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (v294.2)
RTrypsine7rl1R1 A: beta barrelsX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (v294.2)
QA [auth q]Trypsine7rl1q1 A: beta barrelsX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (v294.2)
QTrypsine7rl1Q1 A: beta barrelsX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (v294.2)
PA [auth p]Trypsine7rl1p1 A: beta barrelsX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (v294.2)
PTrypsine7rl1P1 A: beta barrelsX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (v294.2)
OA [auth o]Trypsine7rl1o1 A: beta barrelsX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (v294.2)
OTrypsine7rl1O1 A: beta barrelsX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (v294.2)
NA [auth n]Trypsine7rl1n1 A: beta barrelsX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (v294.2)
NTrypsine7rl1N1 A: beta barrelsX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (v294.2)
MA [auth m]Trypsine7rl1m1 A: beta barrelsX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (v294.2)
MTrypsine7rl1M1 A: beta barrelsX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (v294.2)
LA [auth l]Trypsine7rl1l1 A: beta barrelsX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (v294.2)
LTrypsine7rl1L1 A: beta barrelsX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (v294.2)
KA [auth k]Trypsine7rl1k1 A: beta barrelsX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (v294.2)
KTrypsine7rl1K1 A: beta barrelsX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (v294.2)
JA [auth j]Trypsine7rl1j1 A: beta barrelsX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (v294.2)
JTrypsine7rl1J1 A: beta barrelsX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (v294.2)
IA [auth i]Trypsine7rl1i1 A: beta barrelsX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (v294.2)
ITrypsine7rl1I1 A: beta barrelsX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (v294.2)
HB [auth 8]Trypsine7rl181 A: beta barrelsX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (v294.2)
HA [auth h]Trypsine7rl1h1 A: beta barrelsX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (v294.2)
HTrypsine7rl1H1 A: beta barrelsX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (v294.2)
GB [auth 7]Trypsine7rl171 A: beta barrelsX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (v294.2)
GA [auth g]Trypsine7rl1g1 A: beta barrelsX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (v294.2)
GTrypsine7rl1G1 A: beta barrelsX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (v294.2)
FB [auth 6]Trypsine7rl161 A: beta barrelsX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (v294.2)
FA [auth f]Trypsine7rl1f1 A: beta barrelsX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (v294.2)
FTrypsine7rl1F1 A: beta barrelsX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (v294.2)
EB [auth 5]Trypsine7rl151 A: beta barrelsX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (v294.2)
EA [auth e]Trypsine7rl1e1 A: beta barrelsX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (v294.2)
ETrypsine7rl1E1 A: beta barrelsX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (v294.2)
DB [auth 4]Trypsine7rl141 A: beta barrelsX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (v294.2)
DA [auth d]Trypsine7rl1d1 A: beta barrelsX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (v294.2)
DTrypsine7rl1D1 A: beta barrelsX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (v294.2)
CB [auth 3]Trypsine7rl131 A: beta barrelsX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (v294.2)
CA [auth c]Trypsine7rl1c1 A: beta barrelsX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (v294.2)
CTrypsine7rl1C1 A: beta barrelsX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (v294.2)
BB [auth 2]Trypsine7rl121 A: beta barrelsX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (v294.2)
BA [auth b]Trypsine7rl1b1 A: beta barrelsX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (v294.2)
BTrypsine7rl1B1 A: beta barrelsX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (v294.2)
AB [auth 1]Trypsine7rl111 A: beta barrelsX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (v294.2)
AA [auth a]Trypsine7rl1a1 A: beta barrelsX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: TrypsinECOD (v294.2)
AMetallophose7rl1A1 A: beta barrelsX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: MetallophosECOD (v294.2)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
DNA (5'-D(*CP*A)-3')---
Capsid protein VP1 -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR013607Phospholipase A2-like domainDomain
IPR016184Capsid/spike protein, ssDNA virusHomologous Superfamily
IPR001403Coat protein VP1/VP2, ParvovirusDomain
IPR036952Parvovirus coat protein VP1/VP2Homologous Superfamily