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Data API
7R1L
Clostridium thermocellum CtCBM50 structure in complex with beta-1,4-GlcNAc trisaccharide
External Resource: Annotation
Domain Annotation: ECOD Classification
Protein Family Annotation
InterPro: Protein Family Classification
Domain Annotation: ECOD Classification
ECOD Database Homepage
Chains
Family Name
Domain Identifier
Architecture
Possible Homology
Homology
Topology
Family
Provenance Source (Version)
B
LysM_3
e7r1lB1
A: alpha arrays
X: HTH
H: LysM domain (From Topology)
T: LysM domain
F: LysM_3
ECOD (1.6)
A
LysM_3
e7r1lA1
A: alpha arrays
X: HTH
H: LysM domain (From Topology)
T: LysM domain
F: LysM_3
ECOD (1.6)
C
LysM_3
e7r1lC1
A: alpha arrays
X: HTH
H: LysM domain (From Topology)
T: LysM domain
F: LysM_3
ECOD (1.6)
Protein Family Annotation
Pfam Database Homepage
Chains
Accession
Name
Description
Comments
Source
A
,
B
,
C
PF01476
LysM domain (LysM)
LysM domain
The LysM (lysin motif) domain is about 40 residues long. It is found in a variety of enzymes involved in bacterial cell wall degradation [1]. This domain may have a general peptidoglycan binding function. The structure of this domain is known [2].
Domain
InterPro: Protein Family Classification
InterPro Database Homepage
Chains
Accession
Name
Type
A
,
B
,
C
IPR014044
CAP domain
Domain
A
,
B
,
C
IPR014258
CAP domain, YkwD-like
Domain
A
,
B
,
C
IPR036779
LysM domain superfamily
Homologous Superfamily
A
,
B
,
C
IPR035940
CAP superfamily
Homologous Superfamily
A
,
B
,
C
IPR018392
LysM domain
Domain
A
,
B
,
C
IPR014248
Spore coat assembly protein SafA
Domain
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