7QIU
YsgA 23s RNA methyltransferase from Bacillus subtilis
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | SpoU_sub_bind_1 | e7qiuA2 | A: a+b three layers | X: Bacillus chorismate mutase-like | H: L30e-like (From Topology) | T: L30e-like | F: SpoU_sub_bind_1 | ECOD (1.6) |
A | SpoU_methylase | e7qiuA1 | A: a/b three-layered sandwiches | X: alpha/beta knot (From Topology) | H: alpha/beta knot (From Topology) | T: alpha/beta knot | F: SpoU_methylase | ECOD (1.6) |
B | SpoU_sub_bind_1 | e7qiuB2 | A: a+b three layers | X: Bacillus chorismate mutase-like | H: L30e-like (From Topology) | T: L30e-like | F: SpoU_sub_bind_1 | ECOD (1.6) |
B | SpoU_methylase | e7qiuB1 | A: a/b three-layered sandwiches | X: alpha/beta knot (From Topology) | H: alpha/beta knot (From Topology) | T: alpha/beta knot | F: SpoU_methylase | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF22435 | MRM3-like substrate binding domain (MRM3-like_sub_bind) | MRM3-like substrate binding domain | MRM3 catalyses the formation of 2'-O-methylguanosine at position 1370 Gm1370) in the 16S mitochondrial large subunit ribosomal RNA (mtLSU rRNA), a conserved modification in the peptidyl transferase domain of the mtLSU rRNA [1-3]. This entry represent ... | Domain | |
PF00588 | SpoU rRNA Methylase family (SpoU_methylase) | SpoU rRNA Methylase family | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR001537 | tRNA/rRNA methyltransferase, SpoU type | Domain | |
IPR029026 | tRNA (guanine-N1-)-methyltransferase, N-terminal | Homologous Superfamily | |
IPR051259 | Ribosomal RNA Methyltransferase | Family | |
IPR029028 | Alpha/beta knot methyltransferases | Homologous Superfamily | |
IPR029064 | Ribosomal protein eL30-like superfamily | Homologous Superfamily | |
IPR013123 | RNA 2-O ribose methyltransferase, substrate binding | Domain |