7PZR
Cryo-EM structure of POLRMT in free form.
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | RPOL_N | e7pzrA4 | A: alpha arrays | X: HTH | H: HTH | T: HTH in T7 RNA polymerase | F: RPOL_N | ECOD (1.6) |
A | RNA_pol_2nd | e7pzrA1 | A: alpha arrays | X: helical bundle in Bacillus stearothermophilus-like DNA polymerase I (From Topology) | H: helical bundle in Bacillus stearothermophilus-like DNA polymerase I (From Topology) | T: helical bundle in Bacillus stearothermophilus-like DNA polymerase I | F: RNA_pol_2nd | ECOD (1.6) |
A | RNA_pol_1st | e7pzrA2 | A: alpha arrays | X: inserted helical bundle subdomain in T7 RNA polymerase (From Topology) | H: inserted helical bundle subdomain in T7 RNA polymerase (From Topology) | T: inserted helical bundle subdomain in T7 RNA polymerase | F: RNA_pol_1st | ECOD (1.6) |
A | KOG1038,RPOL_N | e7pzrA3 | A: alpha bundles | X: fingers domain in bacteriophage RB69-like DNA polymerase I (From Topology) | H: fingers domain in bacteriophage RB69-like DNA polymerase I (From Topology) | T: fingers domain in bacteriophage RB69-like DNA polymerase I | F: KOG1038,RPOL_N | ECOD (1.6) |
A | PPR_long | e7pzrA5 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: PPR_long | ECOD (1.6) |
A | RNA_pol_3rd | e7pzrA6 | A: a+b two layers | X: Alpha-beta plaits | H: Adenylyl and guanylyl cyclase catalytic domain-like | T: Adenylyl and guanylyl cyclase catalytic domain-like | F: RNA_pol_3rd | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF14700 | DNA-directed RNA polymerase N-terminal (RPOL_N) | DNA-directed RNA polymerase N-terminal | This is the N-terminal domain of DNA-directed RNA polymerase. This domain has a role in interaction with regions of upstream promoter DNA and the nascent RNA chain, leading to the processivity of the enzyme [1]. In order to make mRNA transcripts the ... | Domain | |
PF00940 | DNA-dependent RNA polymerase (RNA_pol) | DNA-dependent RNA polymerase | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR029262 | DNA-directed RNA polymerase, N-terminal | Domain | |
IPR002092 | DNA-directed RNA polymerase, phage-type | Family | |
IPR011990 | Tetratricopeptide-like helical domain superfamily | Homologous Superfamily | |
IPR043502 | DNA/RNA polymerase superfamily | Homologous Superfamily | |
IPR046950 | DNA-directed RNA polymerase, C-terminal domain, phage-type | Domain | |
IPR037159 | DNA-directed RNA polymerase, N-terminal domain superfamily | Homologous Superfamily |
Pharos: Disease Associations Pharos Homepage Annotation
Chains | Drug Target   | Associated Disease |
---|---|---|
O00411 | :