7PZD
Cryo-EM structure of the NLRP3 PYD filament
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A [auth G] | SCOP2B Superfamily | DEATH domain | 8088526 | 3000069 | SCOP2B (2022-06-29) |
C [auth I] | SCOP2B Superfamily | DEATH domain | 8088526 | 3000069 | SCOP2B (2022-06-29) |
I [auth O] | SCOP2B Superfamily | DEATH domain | 8088526 | 3000069 | SCOP2B (2022-06-29) |
K [auth Q] | SCOP2B Superfamily | DEATH domain | 8088526 | 3000069 | SCOP2B (2022-06-29) |
L [auth R] | SCOP2B Superfamily | DEATH domain | 8088526 | 3000069 | SCOP2B (2022-06-29) |
M [auth S] | SCOP2B Superfamily | DEATH domain | 8088526 | 3000069 | SCOP2B (2022-06-29) |
Q [auth W] | SCOP2B Superfamily | DEATH domain | 8088526 | 3000069 | SCOP2B (2022-06-29) |
B [auth H] | SCOP2B Superfamily | DEATH domain | 8088526 | 3000069 | SCOP2B (2022-06-29) |
D [auth J] | SCOP2B Superfamily | DEATH domain | 8088526 | 3000069 | SCOP2B (2022-06-29) |
E [auth K] | SCOP2B Superfamily | DEATH domain | 8088526 | 3000069 | SCOP2B (2022-06-29) |
F [auth L] | SCOP2B Superfamily | DEATH domain | 8088526 | 3000069 | SCOP2B (2022-06-29) |
G [auth M] | SCOP2B Superfamily | DEATH domain | 8088526 | 3000069 | SCOP2B (2022-06-29) |
H [auth N] | SCOP2B Superfamily | DEATH domain | 8088526 | 3000069 | SCOP2B (2022-06-29) |
J [auth P] | SCOP2B Superfamily | DEATH domain | 8088526 | 3000069 | SCOP2B (2022-06-29) |
N [auth T] | SCOP2B Superfamily | DEATH domain | 8088526 | 3000069 | SCOP2B (2022-06-29) |
O [auth U] | SCOP2B Superfamily | DEATH domain | 8088526 | 3000069 | SCOP2B (2022-06-29) |
P [auth V] | SCOP2B Superfamily | DEATH domain | 8088526 | 3000069 | SCOP2B (2022-06-29) |
R [auth X] | SCOP2B Superfamily | DEATH domain | 8088526 | 3000069 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth G] | PYRIN | e7pzdG1 | A: alpha arrays | X: DEATH domain | H: DEATH domain (From Topology) | T: DEATH domain | F: PYRIN | ECOD (1.6) |
C [auth I] | PYRIN | e7pzdI1 | A: alpha arrays | X: DEATH domain | H: DEATH domain (From Topology) | T: DEATH domain | F: PYRIN | ECOD (1.6) |
I [auth O] | PYRIN | e7pzdO1 | A: alpha arrays | X: DEATH domain | H: DEATH domain (From Topology) | T: DEATH domain | F: PYRIN | ECOD (1.6) |
K [auth Q] | PYRIN | e7pzdQ1 | A: alpha arrays | X: DEATH domain | H: DEATH domain (From Topology) | T: DEATH domain | F: PYRIN | ECOD (1.6) |
L [auth R] | PYRIN | e7pzdR1 | A: alpha arrays | X: DEATH domain | H: DEATH domain (From Topology) | T: DEATH domain | F: PYRIN | ECOD (1.6) |
M [auth S] | PYRIN | e7pzdS1 | A: alpha arrays | X: DEATH domain | H: DEATH domain (From Topology) | T: DEATH domain | F: PYRIN | ECOD (1.6) |
Q [auth W] | PYRIN | e7pzdW1 | A: alpha arrays | X: DEATH domain | H: DEATH domain (From Topology) | T: DEATH domain | F: PYRIN | ECOD (1.6) |
B [auth H] | PYRIN | e7pzdH1 | A: alpha arrays | X: DEATH domain | H: DEATH domain (From Topology) | T: DEATH domain | F: PYRIN | ECOD (1.6) |
D [auth J] | PYRIN | e7pzdJ1 | A: alpha arrays | X: DEATH domain | H: DEATH domain (From Topology) | T: DEATH domain | F: PYRIN | ECOD (1.6) |
E [auth K] | PYRIN | e7pzdK1 | A: alpha arrays | X: DEATH domain | H: DEATH domain (From Topology) | T: DEATH domain | F: PYRIN | ECOD (1.6) |
F [auth L] | PYRIN | e7pzdL1 | A: alpha arrays | X: DEATH domain | H: DEATH domain (From Topology) | T: DEATH domain | F: PYRIN | ECOD (1.6) |
G [auth M] | PYRIN | e7pzdM1 | A: alpha arrays | X: DEATH domain | H: DEATH domain (From Topology) | T: DEATH domain | F: PYRIN | ECOD (1.6) |
H [auth N] | PYRIN | e7pzdN1 | A: alpha arrays | X: DEATH domain | H: DEATH domain (From Topology) | T: DEATH domain | F: PYRIN | ECOD (1.6) |
J [auth P] | PYRIN | e7pzdP1 | A: alpha arrays | X: DEATH domain | H: DEATH domain (From Topology) | T: DEATH domain | F: PYRIN | ECOD (1.6) |
N [auth T] | PYRIN | e7pzdT1 | A: alpha arrays | X: DEATH domain | H: DEATH domain (From Topology) | T: DEATH domain | F: PYRIN | ECOD (1.6) |
O [auth U] | PYRIN | e7pzdU1 | A: alpha arrays | X: DEATH domain | H: DEATH domain (From Topology) | T: DEATH domain | F: PYRIN | ECOD (1.6) |
P [auth V] | PYRIN | e7pzdV1 | A: alpha arrays | X: DEATH domain | H: DEATH domain (From Topology) | T: DEATH domain | F: PYRIN | ECOD (1.6) |
R [auth X] | PYRIN | e7pzdX1 | A: alpha arrays | X: DEATH domain | H: DEATH domain (From Topology) | T: DEATH domain | F: PYRIN | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF02758 | PAAD/DAPIN/Pyrin domain (PYRIN) | PAAD/DAPIN/Pyrin domain | This domain is predicted to contain 6 alpha helices and to have the same fold as the Pfam:PF00531 domain. This similarity may mean that this is a protein-protein interaction domain. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily | |
IPR001611 | Leucine-rich repeat | Repeat | |
IPR004020 | DAPIN domain | Domain | |
IPR029495 | NACHT-associated domain | Domain | |
IPR007111 | NACHT nucleoside triphosphatase | Domain | |
IPR011029 | Death-like domain superfamily | Homologous Superfamily | |
IPR041267 | NACHT, LRR and PYD domains-containing protein, helical domain HD2 | Domain | |
IPR041075 | NOD1/2, winged helix domain | Domain | |
IPR032675 | Leucine-rich repeat domain superfamily | Homologous Superfamily | |
IPR050637 | NLRP family, innate immunity and inflammation regulators | Family |