7PIP
70S ribosome with EF-Tu-tRNA and P-site tRNA in pseudouridimycin-treated Mycoplasma pneumoniae cells
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
J [auth F] | SCOP2B Superfamily | Ribosomal protein S7 | 8107618 | 3000799 | SCOP2B (2022-06-29) |
L [auth H] | SCOP2B Superfamily | Ribosomal protein S5 domain 2-like | 8107610 | 3000100 | SCOP2B (2022-06-29) |
O [auth K] | SCOP2B Superfamily | Nucleic acid-binding proteins | 8107620 | 3000135 | SCOP2B (2022-06-29) |
P [auth L] | SCOP2B Superfamily | S13-like H2TH domain | 8107648 | 3000053 | SCOP2B (2022-06-29) |
T [auth P] | SCOP2B Superfamily | Nucleic acid-binding proteins | 8107664 | 3000135 | SCOP2B (2022-06-29) |
V [auth R] | SCOP2B Superfamily | Ribosomal protein S19 | 8107622 | 3000686 | SCOP2B (2022-06-29) |
BA [auth d] | SCOP2B Superfamily | RL5-like | 8107658 | 3001709 | SCOP2B (2022-06-29) |
GA [auth i] | SCOP2B Superfamily | Ribosomal protein L13 | 8107608 | 3001134 | SCOP2B (2022-06-29) |
HA [auth j] | SCOP2B Superfamily | 50S Ribosomal protein L14-like | 8107662 | 3000433 | SCOP2B (2022-06-29) |
IA [auth k] | SCOP2B Superfamily | Ribosomal proteins L15p and L18e | 8107650 | 3001045 | SCOP2B (2022-06-29) |
MA [auth o] | SCOP2B Superfamily | Translation proteins SH3-like KOW motif containing domain | 8107604 | 3000334 | SCOP2B (2022-06-29) |
OA [auth q] | SCOP2B Superfamily | l21p-like | 8107634 | 3002005 | SCOP2B (2022-06-29) |
SA [auth u] | SCOP2B Superfamily | Ribosomal L27 protein-like | 8107616 | 3000539 | SCOP2B (2022-06-29) |
WA [auth y] | SCOP2B Superfamily | Zn-binding ribosomal proteins | 8107612 | 3001320 | SCOP2B (2022-06-29) |
K [auth G] | SCOP2B Superfamily | Ribosomal protein S8 | 8107654 | 3000709 | SCOP2B (2022-06-29) |
M [auth I] | SCOP2B Superfamily | Ribosomal protein S10 | 8107628 | 3001336 | SCOP2B (2022-06-29) |
N [auth J] | SCOP2B Superfamily | Translational machinery components | 8107646 | 3000571 | SCOP2B (2022-06-29) |
Q [auth M] | SCOP2B Superfamily | Glucocorticoid receptor-like (DNA-binding domain) | 8107656 | 3000068 | SCOP2B (2022-06-29) |
R [auth N] | SCOP2B Superfamily | S15/NS1 RNA-binding domain | 8107606 | 3001284 | SCOP2B (2022-06-29) |
B [auth 1] | SCOP2B Superfamily | L35p-like | 8107614 | 3000790 | SCOP2B (2022-06-29) |
Z [auth b] | SCOP2B Superfamily | Translational proteins | 8107626 | 3000811 | SCOP2B (2022-06-29) |
AA [auth c] | SCOP2B Superfamily | Ribosomal protein L4 | 8107624 | 3001146 | SCOP2B (2022-06-29) |
C [auth 2] | SCOP2B Superfamily | Ribosomal protein L36 | 8107602 | 3001346 | SCOP2B (2022-06-29) |
JA [auth l] | SCOP2B Superfamily | Ribosomal protein L16p/L10e | 8107596 | 3000884 | SCOP2B (2022-06-29) |
KA [auth m] | SCOP2B Superfamily | Prokaryotic ribosomal protein L17 | 8107666 | 3000995 | SCOP2B (2022-06-29) |
LA [auth n] | SCOP2B Superfamily | Translational machinery components | 8107652 | 3000571 | SCOP2B (2022-06-29) |
NA [auth p] | SCOP2B Superfamily | Ribosomal protein L20 | 8107632 | 3000563 | SCOP2B (2022-06-29) |
RA [auth t] | SCOP2B Superfamily | Translation proteins SH3-like KOW motif containing domain | 8107660 | 3000334 | SCOP2B (2022-06-29) |
XA [auth z] | SCOP2B Superfamily | Zn-binding ribosomal proteins | 8107630 | 3001320 | SCOP2B (2022-06-29) |
G [auth C] | SCOP2B Superfamily | Alpha-L RNA-binding motif | 8107598 | 3001473 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth 0] | PF00468 | e7pip01 | A: extended segments | X: 50S ribosomal protein L34 (From Topology) | H: 50S ribosomal protein L34 (From Topology) | T: 50S ribosomal protein L34 | F: PF00468 | ECOD (1.6) |
H [auth D] | PF03719 | e7pipD1 | A: a+b two layers | X: Ribosomal protein S5 domain 2-like (From Topology) | H: Ribosomal protein S5 domain 2-like (From Topology) | T: Ribosomal protein S5 domain 2-like | F: PF03719 | ECOD (1.6) |
H [auth D] | PF00333 | e7pipD2 | A: a+b two layers | X: dsRBD-like | H: dsRNA-binding domain-like (From Topology) | T: dsRNA-binding domain-like | F: PF00333 | ECOD (1.6) |
J [auth F] | PF00177 | e7pipF1 | A: alpha arrays | X: Ribosomal protein S7 (From Topology) | H: Ribosomal protein S7 (From Topology) | T: Ribosomal protein S7 | F: PF00177 | ECOD (1.6) |
L [auth H] | PF00380 | e7pipH1 | A: a+b two layers | X: Ribosomal protein S5 domain 2-like (From Topology) | H: Ribosomal protein S5 domain 2-like (From Topology) | T: Ribosomal protein S5 domain 2-like | F: PF00380 | ECOD (1.6) |
O [auth K] | PF00164 | e7pipK1 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: PF00164 | ECOD (1.6) |
P [auth L] | PF00416 | e7pipL1 | A: alpha arrays | X: HhH/H2TH | H: H2TH (From Topology) | T: H2TH | F: PF00416 | ECOD (1.6) |
T [auth P] | PF00366 | e7pipP1 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: PF00366 | ECOD (1.6) |
V [auth R] | PF00203 | e7pipR1 | A: a+b two layers | X: Ribosomal protein S19 (From Topology) | H: Ribosomal protein S19 (From Topology) | T: Ribosomal protein S19 | F: PF00203 | ECOD (1.6) |
BA [auth d] | PF00281,PF00673 | e7pipd1 | A: a+b two layers | X: Ribosomal protein L5 (From Topology) | H: Ribosomal protein L5 (From Topology) | T: Ribosomal protein L5 | F: PF00281,PF00673 | ECOD (1.6) |
CA [auth e] | PF00347 | e7pipe2 | A: a+b two layers | X: Ribosomal protein L6 (From Topology) | H: Ribosomal protein L6 (From Topology) | T: Ribosomal protein L6 | F: PF00347 | ECOD (1.6) |
DA [auth f] | PF01281 | e7pipf2 | A: a+b two layers | X: L9 N-domain-like | H: L9 N-domain-like (From Topology) | T: L9 N-domain-like | F: PF01281 | ECOD (1.6) |
DA [auth f] | PF03948 | e7pipf1 | A: a+b two layers | X: Ribosomal protein L9 C-domain (From Topology) | H: Ribosomal protein L9 C-domain (From Topology) | T: Ribosomal protein L9 C-domain | F: PF03948 | ECOD (1.6) |
EA [auth g] | PF00466 | e7pipg1 | A: a+b two layers | X: Alpha-beta plaits | H: Ribosomal protein L10-like (From Topology) | T: Ribosomal protein L10-like | F: PF00466 | ECOD (1.6) |
GA [auth i] | PF00572 | e7pipi1 | A: a/b three-layered sandwiches | X: Ribosomal protein L13/L15p/L18e/L32e | H: Ribosomal protein L13 and L16-A (From Topology) | T: Ribosomal protein L13 and L16-A | F: PF00572 | ECOD (1.6) |
HA [auth j] | PF00238 | e7pipj1 | A: beta barrels | X: Ribosomal protein L14-like | H: Ribosomal protein L14-related (From Topology) | T: Ribosomal protein L14-related | F: PF00238 | ECOD (1.6) |
IA [auth k] | PF00828 | e7pipk1 | A: a/b three-layered sandwiches | X: Ribosomal protein L13/L15p/L18e/L32e | H: Ribosomal proteins L15p and L18e (From Topology) | T: Ribosomal proteins L15p and L18e | F: PF00828 | ECOD (1.6) |
MA [auth o] | PF01245 | e7pipo1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: PF01245 | ECOD (1.6) |
OA [auth q] | PF00829 | e7pipq1 | A: beta barrels | X: Ribosomal protein L21p (From Topology) | H: Ribosomal protein L21p (From Topology) | T: Ribosomal protein L21p | F: PF00829 | ECOD (1.6) |
SA [auth u] | PF01016 | e7pipu1 | A: a+b complex topology | X: alpha/beta-Hammerhead/Barrel-sandwich hybrid | H: alpha/beta-Hammerhead/Barrel-sandwich hybrid | T: Ribosomal L27 protein | F: PF01016 | ECOD (1.6) |
TA [auth v] | PF00830 | e7pipv1 | A: few secondary structure elements | X: Ribosomal protein bL28-related (From Homology) | H: Ribosomal protein bL28-related | T: Ribosomal protein L28 | F: PF00830 | ECOD (1.6) |
WA [auth y] | PF01783 | e7pipy1 | A: few secondary structure elements | X: Rubredoxin-like | H: Rubredoxin-related | T: Rubredoxin-related | F: PF01783 | ECOD (1.6) |
K [auth G] | PF00410 | e7pipG2 | A: a+b two layers | X: R3H domain-like | H: Ribosomal protein S8, N-terminal domain (From Topology) | T: Ribosomal protein S8, N-terminal domain | F: PF00410 | ECOD (1.6) |
K [auth G] | PF00410 | e7pipG1 | A: a+b two layers | X: Ribosomal protein S8, C-terminal domain (From Topology) | H: Ribosomal protein S8, C-terminal domain (From Topology) | T: Ribosomal protein S8, C-terminal domain | F: PF00410 | ECOD (1.6) |
M [auth I] | PF00338 | e7pipI1 | A: a+b two layers | X: Alpha-beta plaits | H: Ribosomal protein S10 (From Topology) | T: Ribosomal protein S10 | F: PF00338 | ECOD (1.6) |
N [auth J] | PF00411 | e7pipJ1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: PF00411 | ECOD (1.6) |
Q [auth M] | PF00253 | e7pipM1 | A: few secondary structure elements | X: Glucocorticoid receptor-like | H: LIM domain-like | T: LIM domain-like | F: PF00253 | ECOD (1.6) |
R [auth N] | PF00312 | e7pipN1 | A: alpha arrays | X: S15/NS1 RNA-binding domain (From Topology) | H: S15/NS1 RNA-binding domain (From Topology) | T: S15/NS1 RNA-binding domain | F: PF00312 | ECOD (1.6) |
S [auth O] | PF00886 | e7pipO1 | A: a+b two layers | X: Ribosomal protein S16 (From Topology) | H: Ribosomal protein S16 (From Topology) | T: Ribosomal protein S16 | F: PF00886 | ECOD (1.6) |
B [auth 1] | PF01632 | e7pip11 | A: a+b two layers | X: Ribosomal protein L35p (From Topology) | H: Ribosomal protein L35p (From Topology) | T: Ribosomal protein L35p | F: PF01632 | ECOD (1.6) |
U [auth Q] | PF01084 | e7pipQ1 | A: alpha arrays | X: HTH | H: HTH | T: tri-helical | F: PF01084 | ECOD (1.6) |
W [auth S] | PF01649 | e7pipS1 | A: alpha bundles | X: Spectrin repeat-like | H: Ribosomal protein S20 (From Topology) | T: Ribosomal protein S20 | F: PF01649 | ECOD (1.6) |
X [auth T] | F_UNCLASSIFIED | e7pipT1 | A: extended segments | X: 30S ribosomal protein S21 (From Topology) | H: 30S ribosomal protein S21 (From Topology) | T: 30S ribosomal protein S21 | F: F_UNCLASSIFIED | ECOD (1.6) |
Y [auth a] | PF00181 | e7pipa2 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: PF00181 | ECOD (1.6) |
Y [auth a] | PF03947 | e7pipa1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: PF03947 | ECOD (1.6) |
Z [auth b] | PF00297 | e7pipb1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Alanine racemase-C | F: PF00297 | ECOD (1.6) |
AA [auth c] | PF00573 | e7pipc1 | A: a/b three-layered sandwiches | X: Ribosomal protein L4 (From Topology) | H: Ribosomal protein L4 (From Topology) | T: Ribosomal protein L4 | F: PF00573 | ECOD (1.6) |
C [auth 2] | PF00444 | e7pip21 | A: few secondary structure elements | X: Ribosomal protein L36 (From Topology) | H: Ribosomal protein L36 (From Topology) | T: Ribosomal protein L36 | F: PF00444 | ECOD (1.6) |
FA [auth h] | PF00298 | e7piph1 | A: alpha arrays | X: HTH | H: HTH | T: Ribosomal protein L11, C-terminal domain | F: PF00298 | ECOD (1.6) |
FA [auth h] | PF03946 | e7piph2 | A: a+b two layers | X: Ribosomal protein L11/L12e N-terminal domain-like | H: Ribosomal protein L11/L12e N-terminal domain (From Topology) | T: Ribosomal protein L11/L12e N-terminal domain | F: PF03946 | ECOD (1.6) |
JA [auth l] | PF00252 | e7pipl1 | A: a+b complex topology | X: alpha/beta-Hammerhead/Barrel-sandwich hybrid | H: alpha/beta-Hammerhead/Barrel-sandwich hybrid | T: Ribosomal protein L10e | F: PF00252 | ECOD (1.6) |
KA [auth m] | PF01196 | e7pipm1 | A: a+b two layers | X: Enolase-N/ribosomal protein | H: Prokaryotic ribosomal protein L17 (From Topology) | T: Prokaryotic ribosomal protein L17 | F: PF01196 | ECOD (1.6) |
LA [auth n] | PF00861 | e7pipn1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: PF00861 | ECOD (1.6) |
D [auth 9] | PF03144 | e7pip93 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Alanine racemase-C | F: PF03144 | ECOD (1.6) |
D [auth 9] | PF03143 | e7pip91 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Aminomethyltransferase beta-barrel domain | F: PF03143 | ECOD (1.6) |
D [auth 9] | PF00009 | e7pip92 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF00009 | ECOD (1.6) |
NA [auth p] | PF00453 | e7pipp1 | A: alpha arrays | X: PABP domain-like | H: Ribosomal protein L20 (From Topology) | T: Ribosomal protein L20 | F: PF00453 | ECOD (1.6) |
QA [auth s] | PF00276 | e7pips1 | A: a+b two layers | X: Alpha-beta plaits | H: Ribosomal proteins S24e, L23 and L15e (From Topology) | T: Ribosomal proteins S24e, L23 and L15e | F: PF00276 | ECOD (1.6) |
RA [auth t] | PF00467,PF17136 | e7pipt1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: PF00467,PF17136 | ECOD (1.6) |
VA [auth x] | PF01197 | e7pipx1 | A: few secondary structure elements | X: Ribosomal protein L31p (From Topology) | H: Ribosomal protein L31p (From Topology) | T: Ribosomal protein L31p | F: PF01197 | ECOD (1.6) |
E [auth A] | PF00318 | e7pipA1 | A: a/b three-layered sandwiches | X: Flavodoxin-like | H: Ribosomal protein S2/SIS domain (From Topology) | T: Ribosomal protein S2/SIS domain | F: PF00318 | ECOD (1.6) |
XA [auth z] | PF00471 | e7pipz1 | A: few secondary structure elements | X: Rubredoxin-like | H: Rubredoxin-related | T: Rubredoxin-related | F: PF00471 | ECOD (1.6) |
F [auth B] | PF00189 | e7pipB2 | A: a+b two layers | X: T-fold | H: Ribosomal protein S3-C (From Topology) | T: Ribosomal protein S3-C | F: PF00189 | ECOD (1.6) |
F [auth B] | PF07650 | e7pipB1 | A: a+b two layers | X: Alpha-lytic protease prodomain-like | H: KH-domains | T: Prokaryotic type KH domain (KH-domain type II) | F: PF07650 | ECOD (1.6) |
G [auth C] | PF00163,PF01479 | e7pipC1 | A: a+b two layers | X: beta-Grasp | H: Ubiquitin-related | T: Alpha-L RNA-binding motif | F: PF00163,PF01479 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth 0] | PF00468 | Ribosomal protein L34 (Ribosomal_L34) | Ribosomal protein L34 | - | Family |
H [auth D] | PF03719 | Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C) | Ribosomal protein S5, C-terminal domain | - | Domain |
H [auth D] | PF00281 | Ribosomal protein L5 (Ribosomal_L5) | Ribosomal protein L5 | - | Domain |
H [auth D] | PF00673 | ribosomal L5P family C-terminus (Ribosomal_L5_C) | ribosomal L5P family C-terminus | This region is found associated with Pfam:PF00281. | Domain |
H [auth D] | PF00333 | Ribosomal protein S5, N-terminal domain (Ribosomal_S5) | Ribosomal protein S5, N-terminal domain | - | Domain |
I [auth E] | PF00347 | Ribosomal protein L6 (Ribosomal_L6) | Ribosomal protein L6 | - | Domain |
I [auth E] | PF01250 | Ribosomal protein S6 (Ribosomal_S6) | Ribosomal protein S6 | - | Domain |
J [auth F] | PF01281 | Ribosomal protein L9, N-terminal domain (Ribosomal_L9_N) | Ribosomal protein L9, N-terminal domain | - | Domain |
J [auth F] | PF03948 | Ribosomal protein L9, C-terminal domain (Ribosomal_L9_C) | Ribosomal protein L9, C-terminal domain | - | Domain |
L [auth H] | PF03946 | Ribosomal protein L11, N-terminal domain (Ribosomal_L11_N) | Ribosomal protein L11, N-terminal domain | The N-terminal domain of Ribosomal protein L11 adopts an alpha/beta fold and is followed by the RNA binding C-terminal domain. | Domain |
L [auth H] | PF00380 | Ribosomal protein S9/S16 (Ribosomal_S9) | Ribosomal protein S9/S16 | - | Family |
L [auth H] | PF00298 | Ribosomal protein L11, RNA binding domain (Ribosomal_L11) | Ribosomal protein L11, RNA binding domain | - | Domain |
O [auth K] | PF00828 | Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A) | Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A | - | Family |
O [auth K] | PF00164 | Ribosomal protein S12/S23 (Ribosom_S12_S23) | Ribosomal protein S12/S23 | - | Family |
P [auth L] | PF00252 | Ribosomal protein L16p/L10e (Ribosomal_L16) | Ribosomal protein L16p/L10e | - | Domain |
T [auth P] | PF00453 | Ribosomal protein L20 (Ribosomal_L20) | Ribosomal protein L20 | - | Family |
T [auth P] | PF00366 | Ribosomal protein S17 (Ribosomal_S17) | Ribosomal protein S17 | - | Domain |
V [auth R] | PF00237 | Ribosomal protein L22p/L17e (Ribosomal_L22) | Ribosomal protein L22p/L17e | This family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes. | Domain |
V [auth R] | PF00203 | Ribosomal protein S19 (Ribosomal_S19) | Ribosomal protein S19 | - | Domain |
K [auth G] | PF00410 | Ribosomal protein S8 (Ribosomal_S8) | Ribosomal protein S8 | - | Domain |
M [auth I] | PF00338 | Ribosomal protein S10p/S20e (Ribosomal_S10) | Ribosomal protein S10p/S20e | This family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes. | Domain |
M [auth I] | PF00572 | Ribosomal protein L13 (Ribosomal_L13) | Ribosomal protein L13 | - | Family |
N [auth J] | PF00238 | Ribosomal protein L14p/L23e (Ribosomal_L14) | Ribosomal protein L14p/L23e | - | Domain |
N [auth J] | PF00411 | Ribosomal protein S11 (Ribosomal_S11) | Ribosomal protein S11 | - | Family |
Q [auth M] | PF01196 | Ribosomal protein L17 (Ribosomal_L17) | Ribosomal protein L17 | - | Family |
Q [auth M] | PF00253 | Ribosomal protein S14p/S29e (Ribosomal_S14) | Ribosomal protein S14p/S29e | - | Family |
R [auth N] | PF00861 | Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast (Ribosomal_L18p) | Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast | - | Family |
R [auth N] | PF00312 | Ribosomal protein S15 (Ribosomal_S15) | Ribosomal protein S15 | - | Domain |
S [auth O] | PF00886 | Ribosomal protein S16 (Ribosomal_S16) | Ribosomal protein S16 | - | Family |
S [auth O] | PF01245 | Ribosomal protein L19 (Ribosomal_L19) | Ribosomal protein L19 | - | Family |
B [auth 1] | PF01632 | Ribosomal protein L35 (Ribosomal_L35p) | Ribosomal protein L35 | - | Family |
U [auth Q] | PF01084 | Ribosomal protein S18 (Ribosomal_S18) | Ribosomal protein S18 | - | Family |
U [auth Q] | PF00829 | Ribosomal prokaryotic L21 protein (Ribosomal_L21p) | Ribosomal prokaryotic L21 protein | - | Family |
W [auth S] | PF00276 | Ribosomal protein L23 (Ribosomal_L23) | Ribosomal protein L23 | - | Family |
X [auth T] | PF17136 | Ribosomal proteins 50S L24/mitochondrial 39S L24 (ribosomal_L24) | Ribosomal proteins 50S L24/mitochondrial 39S L24 | - | Family |
X [auth T] | PF00467 | KOW motif (KOW) | KOW motif | - | Family |
C [auth 2] | PF00444 | Ribosomal protein L36 (Ribosomal_L36) | Ribosomal protein L36 | - | Domain |
D [auth 9] | PF00009 | Elongation factor Tu GTP binding domain (GTP_EFTU) | Elongation factor Tu GTP binding domain | This domain contains a P-loop motif, also found in several other families such as Pfam:PF00071, Pfam:PF00025 and Pfam:PF00063. Elongation factor Tu consists of three structural domains, this plus two C-terminal beta barrel domains. | Domain |
D [auth 9] | PF03143 | Elongation factor Tu C-terminal domain (GTP_EFTU_D3) | Elongation factor Tu C-terminal domain | Elongation factor Tu consists of three structural domains, this is the third domain. This domain adopts a beta barrel structure. This the third domain is involved in binding to both charged tRNA [1] and binding to EF-Ts Pfam:PF00889 [2]. | Domain |
D [auth 9] | PF03144 | Elongation factor Tu domain 2 (GTP_EFTU_D2) | Elongation factor Tu domain 2 | Elongation factor Tu consists of three structural domains, this is the second domain. This domain adopts a beta barrel structure. This the second domain is involved in binding to charged tRNA [1]. This domain is also found in other proteins such as e ... | Domain |
E [auth A] | PF03947 | Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C) | Ribosomal Proteins L2, C-terminal domain | - | Domain |
E [auth A] | PF00181 | Ribosomal Proteins L2, RNA binding domain (Ribosomal_L2) | Ribosomal Proteins L2, RNA binding domain | - | Domain |
E [auth A] | PF00318 | Ribosomal protein S2 (Ribosomal_S2) | Ribosomal protein S2 | - | Family |
F [auth B] | PF07650 | KH domain (KH_2) | KH domain | - | Domain |
F [auth B] | PF00297 | Ribosomal protein L3 (Ribosomal_L3) | Ribosomal protein L3 | - | Family |
F [auth B] | PF00189 | Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C) | Ribosomal protein S3, C-terminal domain | This family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer. | Domain |
G [auth C] | PF00163 | Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4) | Ribosomal protein S4/S9 N-terminal domain | - | Family |
G [auth C] | PF00573 | Ribosomal protein L4/L1 family (Ribosomal_L4) | Ribosomal protein L4/L1 family | - | Family |
G [auth C] | PF01479 | S4 domain (S4) | S4 domain | The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ... | Domain |