7PI0 | pdb_00007pi0

Unstacked compact Dunaliella PSII


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
IPAEe7pi0I1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: PAEECOD (v295.2)
HA [auth i]PAEe7pi0i1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: PAEECOD (v295.2)
GA [auth h]PAEe7pi0h1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: PAEECOD (v295.2)
HPAEe7pi0H1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: PAEECOD (v295.2)
G [auth F]PAEe7pi0F1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: PAEECOD (v295.2)
FA [auth f]PAEe7pi0f1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: PAEECOD (v295.2)
F [auth E]PAEe7pi0E1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: PAEECOD (v295.2)
EA [auth e]PAEe7pi0e1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: PAEECOD (v295.2)
E [auth D]PAEe7pi0D1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: PAEECOD (v295.2)
DA [auth d]PAEe7pi0d1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: PAEECOD (v295.2)
D [auth C]PAEe7pi0C1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: PAEECOD (v295.2)
CA [auth c]PAEe7pi0c1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: PAEECOD (v295.2)
C [auth V]PAEe7pi0V1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: PAEECOD (v295.2)
BA [auth v]PAEe7pi0v1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: PAEECOD (v295.2)
X [auth Y]PAEe7pi0Y1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: PAEECOD (v295.2)
WA [auth y]PAEe7pi0y1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: PAEECOD (v295.2)
W [auth S]PAEe7pi0S1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: PAEECOD (v295.2)
VA [auth s]PAEe7pi0s1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: PAEECOD (v295.2)
V [auth R]PAEe7pi0R1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: PAEECOD (v295.2)
UA [auth r]PAEe7pi0r1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: PAEECOD (v295.2)
U [auth G]PAEe7pi0G1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: PAEECOD (v295.2)
TA [auth g]PAEe7pi0g1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: PAEECOD (v295.2)
T [auth N]PAEe7pi0N1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: PAEECOD (v295.2)
SA [auth n]PAEe7pi0n1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: PAEECOD (v295.2)
AA [auth b]PAEe7pi0b1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: PAEECOD (v295.2)
BPAEe7pi0B1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: PAEECOD (v295.2)
S [auth Z]PAEe7pi0Z1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: PAEECOD (v295.2)
RA [auth z]PAEe7pi0z1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: PAEECOD (v295.2)
R [auth X]PAEe7pi0X1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: PAEECOD (v295.2)
QA [auth x]PAEe7pi0x1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: PAEECOD (v295.2)
Q [auth W]PAEe7pi0W1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: PAEECOD (v295.2)
PA [auth w]PAEe7pi0w1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: PAEECOD (v295.2)
P [auth T]PAEe7pi0T1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: PAEECOD (v295.2)
OA [auth t]PAEe7pi0t1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: PAEECOD (v295.2)
O [auth P]PAEe7pi0P1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: PAEECOD (v295.2)
NA [auth p]PAEe7pi0p1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: PAEECOD (v295.2)
N [auth O]PAEe7pi0O1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: PAEECOD (v295.2)
MA [auth o]PAEe7pi0o1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: PAEECOD (v295.2)
MPAEe7pi0M1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: PAEECOD (v295.2)
LA [auth m]PAEe7pi0m1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: PAEECOD (v295.2)
LPAEe7pi0L1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: PAEECOD (v295.2)
KA [auth l]PAEe7pi0l1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: PAEECOD (v295.2)
JA [auth k]PAEe7pi0k1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: PAEECOD (v295.2)
KPAEe7pi0K1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: PAEECOD (v295.2)
JPAEe7pi0J1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: PAEECOD (v295.2)
IA [auth j]PAEe7pi0j1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: PAEECOD (v295.2)
Z [auth a]PAEe7pi0a1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: PAEECOD (v295.2)
APAEe7pi0A1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: PAEECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
F [auth E]1.20.5.860 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces Photosystem II cytochrome b559, alpha subunitCATH (utative)
EA [auth e]1.20.5.860 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces Photosystem II cytochrome b559, alpha subunitCATH (utative)
X [auth Y]1.10.3460.10 Mainly Alpha Orthogonal Bundle Chlorophyll a-b binding protein Chlorophyll a/b binding protein domainCATH (utative)
WA [auth y]1.10.3460.10 Mainly Alpha Orthogonal Bundle Chlorophyll a-b binding protein Chlorophyll a/b binding protein domainCATH (utative)
W [auth S]1.10.3460.10 Mainly Alpha Orthogonal Bundle Chlorophyll a-b binding protein Chlorophyll a/b binding protein domainCATH (utative)
VA [auth s]1.10.3460.10 Mainly Alpha Orthogonal Bundle Chlorophyll a-b binding protein Chlorophyll a/b binding protein domainCATH (utative)
U [auth G]1.10.3460.10 Mainly Alpha Orthogonal Bundle Chlorophyll a-b binding protein Chlorophyll a/b binding protein domainCATH (utative)
TA [auth g]1.10.3460.10 Mainly Alpha Orthogonal Bundle Chlorophyll a-b binding protein Chlorophyll a/b binding protein domainCATH (utative)
T [auth N]1.10.3460.10 Mainly Alpha Orthogonal Bundle Chlorophyll a-b binding protein Chlorophyll a/b binding protein domainCATH (utative)
SA [auth n]1.10.3460.10 Mainly Alpha Orthogonal Bundle Chlorophyll a-b binding protein Chlorophyll a/b binding protein domainCATH (utative)
Z [auth a]1.20.85.10 Mainly Alpha Up-down Bundle Photosynthetic Reaction Center, subunit M domain 1CATH (utative)
A1.20.85.10 Mainly Alpha Up-down Bundle Photosynthetic Reaction Center, subunit M domain 1CATH (utative)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
HA [auth i],
I
Photosystem II reaction center protein I-
GA [auth h],
H
Photosystem II reaction center protein H
FA [auth f],
G [auth F]
Cytochrome b559 subunit beta
EA [auth e],
F [auth E]
Cytochrome b559 subunit alpha
DA [auth d],
E [auth D]
Photosystem II D2 protein
CA [auth c],
D [auth C]
Photosystem II CP43 reaction center protein
BA [auth v],
C [auth V]
Photosystem II reaction center protein Ycf12-
XA [auth u],
Y [auth U]
Photosystem II extrinsic protein U---
WA [auth y],
X [auth Y]
Chlorophyll a-b binding protein of LHCII type 1, chloroplastic
VA [auth s],
W [auth S]
Chlorophyll a-b binding protein, chloroplastic, CP26
UA [auth r],
V [auth R]
Chlorophyll a-b binding protein, chloroplastic, CP29---
TA [auth g],
U [auth G]
Chlorophyll a-b binding protein of LHCII type 2, chloroplastic
SA [auth n],
T [auth N]
Chlorophyll a-b binding protein of LHCII type 3, chloroplastic
AA [auth b],
B
Photosystem II CP47 reaction center protein
RA [auth z],
S [auth Z]
Photosystem II reaction center protein Z-
QA [auth x],
R [auth X]
Hypothetical protein-
PA [auth w],
Q [auth W]
PSII 6.1 kDa protein-
OA [auth t],
P [auth T]
Photosystem II reaction center protein T-
NA [auth p],
O [auth P]
Oxygen-evolving enhancer protein 2, chloroplastic
MA [auth o],
N [auth O]
Oxygen-evolving enhancer protein 1, chloroplastic
LA [auth m],
M
Photosystem II reaction center protein M-
KA [auth l],
L
Photosystem II reaction center protein L-
JA [auth k],
K
Photosystem II reaction center protein K-
IA [auth j],
J
Photosystem II reaction center protein J-
A,
Z [auth a]
Photosystem II protein D1

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
HA [auth i],
I
IPR037271Photosystem II PsbI superfamilyHomologous Superfamily
HA [auth i],
I
IPR003686Photosystem II PsbIFamily
GA [auth h],
H
IPR036863Photosystem II reaction centre protein H superfamilyHomologous Superfamily
GA [auth h],
H
IPR001056Photosystem II reaction centre protein HFamily
FA [auth f],
G [auth F]
IPR006241Photosystem II cytochrome b559, beta subunitFamily
FA [auth f],
G [auth F]
IPR013081Photosystem II cytochrome b559, N-terminalDomain
FA [auth f],
G [auth F]
IPR006216Photosystem II cytochrome b559, conserved siteConserved Site
EA [auth e],
F [auth E]
IPR013081Photosystem II cytochrome b559, N-terminalDomain
EA [auth e],
F [auth E]
IPR006217Photosystem II cytochrome b559, alpha subunitFamily
EA [auth e],
F [auth E]
IPR013082Photosystem II cytochrome b559, alpha subunit, lumenal regionDomain
EA [auth e],
F [auth E]
IPR037025Photosystem II cytochrome b559, alpha subunit superfamilyHomologous Superfamily
EA [auth e],
F [auth E]
IPR006216Photosystem II cytochrome b559, conserved siteConserved Site
DA [auth d],
E [auth D]
IPR005868Photosystem II D2Family
DA [auth d],
E [auth D]
IPR036854Photosystem II protein D1/D2 superfamilyHomologous Superfamily
DA [auth d],
E [auth D]
IPR000484Photosynthetic reaction centre, L/MFamily
DA [auth d],
E [auth D]
IPR055265Photosynthetic reaction centre, L/M, conserved siteConserved Site
DA [auth d],
E [auth D]
IPR055266Photosystem II protein D1/D2Family
CA [auth c],
D [auth C]
IPR036001Photosystem antenna protein-like superfamilyHomologous Superfamily
CA [auth c],
D [auth C]
IPR000932Photosystem antenna protein-likeFamily
CA [auth c],
D [auth C]
IPR005869Photosystem II CP43 reaction centre proteinFamily
CA [auth c],
D [auth C]
IPR044900Photosystem II CP43 reaction centre protein superfamilyHomologous Superfamily
BA [auth v],
C [auth V]
IPR010284Photosystem II reaction center protein Ycf12Family
WA [auth y],
X [auth Y]
IPR001344Chlorophyll A-B binding protein, plant and chromistaFamily
WA [auth y],
X [auth Y]
IPR022796Chlorophyll A-B binding proteinFamily
VA [auth s],
W [auth S]
IPR001344Chlorophyll A-B binding protein, plant and chromistaFamily
VA [auth s],
W [auth S]
IPR022796Chlorophyll A-B binding proteinFamily
TA [auth g],
U [auth G]
IPR001344Chlorophyll A-B binding protein, plant and chromistaFamily
TA [auth g],
U [auth G]
IPR022796Chlorophyll A-B binding proteinFamily
SA [auth n],
T [auth N]
IPR001344Chlorophyll A-B binding protein, plant and chromistaFamily
SA [auth n],
T [auth N]
IPR022796Chlorophyll A-B binding proteinFamily
AA [auth b],
B
IPR036001Photosystem antenna protein-like superfamilyHomologous Superfamily
AA [auth b],
B
IPR000932Photosystem antenna protein-likeFamily
AA [auth b],
B
IPR017486Photosystem II CP47 reaction centre proteinFamily
RA [auth z],
S [auth Z]
IPR036512Photosystem II PsbZ superfamilyHomologous Superfamily
RA [auth z],
S [auth Z]
IPR002644Photosystem II PsbZ, reaction centreFamily
QA [auth x],
R [auth X]
IPR009518Photosystem II PsbXFamily
PA [auth w],
Q [auth W]
IPR009806Photosystem II PsbW, class 2Family
OA [auth t],
P [auth T]
IPR001743Photosystem II PsbTFamily
OA [auth t],
P [auth T]
IPR037268Photosystem II PsbT superfamilyHomologous Superfamily
NA [auth p],
O [auth P]
IPR002683PsbP, C-terminalDomain
NA [auth p],
O [auth P]
IPR016123Mog1/PsbP, alpha/beta/alpha sandwichHomologous Superfamily
MA [auth o],
N [auth O]
IPR011250Outer membrane protein/outer membrane enzyme PagP, beta-barrelHomologous Superfamily
MA [auth o],
N [auth O]
IPR002628Photosystem II extrinsic protein OFamily
LA [auth m],
M
IPR007826Photosystem II PsbMFamily
LA [auth m],
M
IPR037269Photosystem II PsbM superfamilyHomologous Superfamily
KA [auth l],
L
IPR003372Photosystem II PsbLFamily
KA [auth l],
L
IPR037266Photosystem II PsbL superfamilyHomologous Superfamily
JA [auth k],
K
IPR037270Photosystem II PsbK superfamilyHomologous Superfamily
JA [auth k],
K
IPR003687Photosystem II PsbKFamily
IA [auth j],
J
IPR002682Photosystem II PsbJFamily
IA [auth j],
J
IPR037267Photosystem II PsbJ superfamilyHomologous Superfamily
A,
Z [auth a]
IPR036854Photosystem II protein D1/D2 superfamilyHomologous Superfamily
A,
Z [auth a]
IPR005867Photosystem II protein D1Family
A,
Z [auth a]
IPR000484Photosynthetic reaction centre, L/MFamily
A,
Z [auth a]
IPR055265Photosynthetic reaction centre, L/M, conserved siteConserved Site
A,
Z [auth a]
IPR055266Photosystem II protein D1/D2Family

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
UA [auth r],
V [auth R]
SEP Parent Component: SER

AA0037

:  O-phospho-L-serine MOD:00046
AA [auth b],
B
CSD Parent Component: CYS

AA0037 , AA0262

:  O-phospho-L-serine MOD:00046 , L-cysteine sulfinic acid MOD:00267