7P5H
TmHydABC- D2 map
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Fer4_7_1 | e7p5hA1 | A: a+b two layers | X: 4Fe-4S ferredoxin (From Topology) | H: 4Fe-4S ferredoxin (From Topology) | T: 4Fe-4S ferredoxin | F: Fer4_7_1 | ECOD (1.6) |
A | Fer2_4 | e7p5hA5 | A: a+b two layers | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: Fer2_4 | ECOD (1.6) |
A | Fe_hyd_lg_C | e7p5hA3 | A: a/b three-layered sandwiches | X: Fe-only hydrogenase (From Topology) | H: Fe-only hydrogenase (From Topology) | T: Fe-only hydrogenase | F: Fe_hyd_lg_C | ECOD (1.6) |
A | NADH-G_4Fe-4S_3 | e7p5hA4 | A: extended segments | X: iron-sulfur center-binding helical hairpin (From Topology) | H: iron-sulfur center-binding helical hairpin (From Topology) | T: iron-sulfur center-binding helical hairpin | F: NADH-G_4Fe-4S_3 | ECOD (1.6) |
A | F_UNCLASSIFIED | e7p5hA2 | A: extended segments | X: Fe-only hydrogenase smaller subunit (From Topology) | H: Fe-only hydrogenase smaller subunit (From Topology) | T: Fe-only hydrogenase smaller subunit | F: F_UNCLASSIFIED | ECOD (1.6) |
D | Fer4_7_1 | e7p5hD2 | A: a+b two layers | X: 4Fe-4S ferredoxin (From Topology) | H: 4Fe-4S ferredoxin (From Topology) | T: 4Fe-4S ferredoxin | F: Fer4_7_1 | ECOD (1.6) |
D | Fer2_4 | e7p5hD4 | A: a+b two layers | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: Fer2_4 | ECOD (1.6) |
D | Fe_hyd_lg_C | e7p5hD5 | A: a/b three-layered sandwiches | X: Fe-only hydrogenase (From Topology) | H: Fe-only hydrogenase (From Topology) | T: Fe-only hydrogenase | F: Fe_hyd_lg_C | ECOD (1.6) |
D | NADH-G_4Fe-4S_3 | e7p5hD3 | A: extended segments | X: iron-sulfur center-binding helical hairpin (From Topology) | H: iron-sulfur center-binding helical hairpin (From Topology) | T: iron-sulfur center-binding helical hairpin | F: NADH-G_4Fe-4S_3 | ECOD (1.6) |
D | F_UNCLASSIFIED | e7p5hD1 | A: extended segments | X: Fe-only hydrogenase smaller subunit (From Topology) | H: Fe-only hydrogenase smaller subunit (From Topology) | T: Fe-only hydrogenase smaller subunit | F: F_UNCLASSIFIED | ECOD (1.6) |
G [auth a] | Fer4_7_1 | e7p5ha5 | A: a+b two layers | X: 4Fe-4S ferredoxin (From Topology) | H: 4Fe-4S ferredoxin (From Topology) | T: 4Fe-4S ferredoxin | F: Fer4_7_1 | ECOD (1.6) |
G [auth a] | Fer2_4 | e7p5ha2 | A: a+b two layers | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: Fer2_4 | ECOD (1.6) |
G [auth a] | Fe_hyd_lg_C | e7p5ha4 | A: a/b three-layered sandwiches | X: Fe-only hydrogenase (From Topology) | H: Fe-only hydrogenase (From Topology) | T: Fe-only hydrogenase | F: Fe_hyd_lg_C | ECOD (1.6) |
G [auth a] | NADH-G_4Fe-4S_3 | e7p5ha3 | A: extended segments | X: iron-sulfur center-binding helical hairpin (From Topology) | H: iron-sulfur center-binding helical hairpin (From Topology) | T: iron-sulfur center-binding helical hairpin | F: NADH-G_4Fe-4S_3 | ECOD (1.6) |
G [auth a] | F_UNCLASSIFIED | e7p5ha1 | A: extended segments | X: Fe-only hydrogenase smaller subunit (From Topology) | H: Fe-only hydrogenase smaller subunit (From Topology) | T: Fe-only hydrogenase smaller subunit | F: F_UNCLASSIFIED | ECOD (1.6) |
J [auth d] | Fer4_7_1 | e7p5hd1 | A: a+b two layers | X: 4Fe-4S ferredoxin (From Topology) | H: 4Fe-4S ferredoxin (From Topology) | T: 4Fe-4S ferredoxin | F: Fer4_7_1 | ECOD (1.6) |
J [auth d] | Fer2_4 | e7p5hd4 | A: a+b two layers | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: Fer2_4 | ECOD (1.6) |
J [auth d] | Fe_hyd_lg_C | e7p5hd5 | A: a/b three-layered sandwiches | X: Fe-only hydrogenase (From Topology) | H: Fe-only hydrogenase (From Topology) | T: Fe-only hydrogenase | F: Fe_hyd_lg_C | ECOD (1.6) |
J [auth d] | NADH-G_4Fe-4S_3 | e7p5hd3 | A: extended segments | X: iron-sulfur center-binding helical hairpin (From Topology) | H: iron-sulfur center-binding helical hairpin (From Topology) | T: iron-sulfur center-binding helical hairpin | F: NADH-G_4Fe-4S_3 | ECOD (1.6) |
J [auth d] | F_UNCLASSIFIED | e7p5hd2 | A: extended segments | X: Fe-only hydrogenase smaller subunit (From Topology) | H: Fe-only hydrogenase smaller subunit (From Topology) | T: Fe-only hydrogenase smaller subunit | F: F_UNCLASSIFIED | ECOD (1.6) |
B | NADH_4Fe-4S | e7p5hB2 | A: alpha bundles | X: Bromodomain-like | H: Nqo1C-terminal domain-like (From Topology) | T: Nqo1C-terminal domain-like | F: NADH_4Fe-4S | ECOD (1.6) |
B | SLBB | e7p5hB3 | A: a+b two layers | X: beta-Grasp | H: Ubiquitin-related | T: Nqo1 middle domain-like | F: SLBB | ECOD (1.6) |
B | 2Fe-2S_thioredx_C_1 | e7p5hB4 | A: a+b three layers | X: Thioredoxin-like | H: Thioredoxin-like (From Topology) | T: Thioredoxin-like | F: 2Fe-2S_thioredx_C_1 | ECOD (1.6) |
B | Complex1_51K | e7p5hB1 | A: a/b three-layered sandwiches | X: Nqo1 FMN-binding domain-like (From Topology) | H: Nqo1 FMN-binding domain-like (From Topology) | T: Nqo1 FMN-binding domain-like | F: Complex1_51K | ECOD (1.6) |
E | NADH_4Fe-4S | e7p5hE2 | A: alpha bundles | X: Bromodomain-like | H: Nqo1C-terminal domain-like (From Topology) | T: Nqo1C-terminal domain-like | F: NADH_4Fe-4S | ECOD (1.6) |
E | SLBB | e7p5hE3 | A: a+b two layers | X: beta-Grasp | H: Ubiquitin-related | T: Nqo1 middle domain-like | F: SLBB | ECOD (1.6) |
E | 2Fe-2S_thioredx_C_1 | e7p5hE4 | A: a+b three layers | X: Thioredoxin-like | H: Thioredoxin-like (From Topology) | T: Thioredoxin-like | F: 2Fe-2S_thioredx_C_1 | ECOD (1.6) |
E | Complex1_51K | e7p5hE1 | A: a/b three-layered sandwiches | X: Nqo1 FMN-binding domain-like (From Topology) | H: Nqo1 FMN-binding domain-like (From Topology) | T: Nqo1 FMN-binding domain-like | F: Complex1_51K | ECOD (1.6) |
H [auth b] | NADH_4Fe-4S | e7p5hb2 | A: alpha bundles | X: Bromodomain-like | H: Nqo1C-terminal domain-like (From Topology) | T: Nqo1C-terminal domain-like | F: NADH_4Fe-4S | ECOD (1.6) |
H [auth b] | SLBB | e7p5hb3 | A: a+b two layers | X: beta-Grasp | H: Ubiquitin-related | T: Nqo1 middle domain-like | F: SLBB | ECOD (1.6) |
H [auth b] | 2Fe-2S_thioredx_C_1 | e7p5hb4 | A: a+b three layers | X: Thioredoxin-like | H: Thioredoxin-like (From Topology) | T: Thioredoxin-like | F: 2Fe-2S_thioredx_C_1 | ECOD (1.6) |
H [auth b] | Complex1_51K | e7p5hb1 | A: a/b three-layered sandwiches | X: Nqo1 FMN-binding domain-like (From Topology) | H: Nqo1 FMN-binding domain-like (From Topology) | T: Nqo1 FMN-binding domain-like | F: Complex1_51K | ECOD (1.6) |
K [auth e] | NADH_4Fe-4S | e7p5he2 | A: alpha bundles | X: Bromodomain-like | H: Nqo1C-terminal domain-like (From Topology) | T: Nqo1C-terminal domain-like | F: NADH_4Fe-4S | ECOD (1.6) |
K [auth e] | SLBB | e7p5he3 | A: a+b two layers | X: beta-Grasp | H: Ubiquitin-related | T: Nqo1 middle domain-like | F: SLBB | ECOD (1.6) |
K [auth e] | 2Fe-2S_thioredx_C_1 | e7p5he4 | A: a+b three layers | X: Thioredoxin-like | H: Thioredoxin-like (From Topology) | T: Thioredoxin-like | F: 2Fe-2S_thioredx_C_1 | ECOD (1.6) |
K [auth e] | Complex1_51K | e7p5he1 | A: a/b three-layered sandwiches | X: Nqo1 FMN-binding domain-like (From Topology) | H: Nqo1 FMN-binding domain-like (From Topology) | T: Nqo1 FMN-binding domain-like | F: Complex1_51K | ECOD (1.6) |
C | 2Fe-2S_thioredx_N | e7p5hC2 | A: alpha bundles | X: NQO2 helical bundle domain (From Topology) | H: NQO2 helical bundle domain (From Topology) | T: NQO2 helical bundle domain | F: 2Fe-2S_thioredx_N | ECOD (1.6) |
C | 2Fe-2S_thioredx_C | e7p5hC1 | A: a+b three layers | X: Thioredoxin-like | H: Thioredoxin-like (From Topology) | T: Thioredoxin-like | F: 2Fe-2S_thioredx_C | ECOD (1.6) |
F | 2Fe-2S_thioredx_N | e7p5hF1 | A: alpha bundles | X: NQO2 helical bundle domain (From Topology) | H: NQO2 helical bundle domain (From Topology) | T: NQO2 helical bundle domain | F: 2Fe-2S_thioredx_N | ECOD (1.6) |
F | 2Fe-2S_thioredx_C | e7p5hF2 | A: a+b three layers | X: Thioredoxin-like | H: Thioredoxin-like (From Topology) | T: Thioredoxin-like | F: 2Fe-2S_thioredx_C | ECOD (1.6) |
I [auth c] | 2Fe-2S_thioredx_N | e7p5hc1 | A: alpha bundles | X: NQO2 helical bundle domain (From Topology) | H: NQO2 helical bundle domain (From Topology) | T: NQO2 helical bundle domain | F: 2Fe-2S_thioredx_N | ECOD (1.6) |
I [auth c] | 2Fe-2S_thioredx_C | e7p5hc2 | A: a+b three layers | X: Thioredoxin-like | H: Thioredoxin-like (From Topology) | T: Thioredoxin-like | F: 2Fe-2S_thioredx_C | ECOD (1.6) |
L [auth f] | 2Fe-2S_thioredx_N | e7p5hf1 | A: alpha bundles | X: NQO2 helical bundle domain (From Topology) | H: NQO2 helical bundle domain (From Topology) | T: NQO2 helical bundle domain | F: 2Fe-2S_thioredx_N | ECOD (1.6) |
L [auth f] | 2Fe-2S_thioredx_C | e7p5hf2 | A: a+b three layers | X: Thioredoxin-like | H: Thioredoxin-like (From Topology) | T: Thioredoxin-like | F: 2Fe-2S_thioredx_C | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, D, G [auth a], J [auth d] | PF02906 | Iron only hydrogenase large subunit, C-terminal domain (Fe_hyd_lg_C) | Iron only hydrogenase large subunit, C-terminal domain | - | Domain |
A, D, G [auth a], J [auth d] | PF02256 | Iron hydrogenase small subunit (Fe_hyd_SSU) | Iron hydrogenase small subunit | This family represents the small subunit of the Fe-only hydrogenases EC:1.18.99.1. The subunit is comprised of alternating random coil and alpha helical structures that encompasses the large subunit in a novel protein fold [1]. | Domain |
A, D, G [auth a], J [auth d] | PF00111 | 2Fe-2S iron-sulfur cluster binding domain (Fer2) | 2Fe-2S iron-sulfur cluster binding domain | - | Domain |
A, D, G [auth a], J [auth d] | PF00037 | 4Fe-4S binding domain (Fer4) | 4Fe-4S binding domain | Superfamily includes proteins containing domains which bind to iron-sulfur clusters. Members include bacterial ferredoxins, various dehydrogenases, and various reductases. Structure of the domain is an alpha-antiparallel beta sandwich. | Domain |
A, D, G [auth a], J [auth d] | PF10588 | NADH-ubiquinone oxidoreductase-G iron-sulfur binding region (NADH-G_4Fe-4S_3) | NADH-ubiquinone oxidoreductase-G iron-sulfur binding region | - | Domain |
B, E, H [auth b], K [auth e] | PF01257 | Thioredoxin-like [2Fe-2S] ferredoxin (2Fe-2S_thioredx) | Thioredoxin-like [2Fe-2S] ferredoxin | - | Family |
B, E, H [auth b], K [auth e] | PF01512 | Respiratory-chain NADH dehydrogenase 51 Kd subunit (Complex1_51K) | Respiratory-chain NADH dehydrogenase 51 Kd subunit | - | Family |
B, E, H [auth b], K [auth e] | PF10589 | NADH-ubiquinone oxidoreductase-F iron-sulfur binding region (NADH_4Fe-4S) | NADH-ubiquinone oxidoreductase-F iron-sulfur binding region | - | Domain |
C, F, I [auth c], L [auth f] | PF01257 | Thioredoxin-like [2Fe-2S] ferredoxin (2Fe-2S_thioredx) | Thioredoxin-like [2Fe-2S] ferredoxin | - | Family |