7OYA

Cryo-EM structure of the 1 hpf zebrafish embryo 80S ribosome


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
J [auth L2]Ribosomal_S17_1e7oyaL21 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S17_1ECOD (1.6)
K [auth N2]Ribosomal_S13_Ne7oyaN21 A: alpha arraysX: HTHH: 40S ribosomal protein S13 N-terminal domain (From Topology)T: 40S ribosomal protein S13 N-terminal domainF: Ribosomal_S13_NECOD (1.6)
K [auth N2]Ribosomal_S15_2e7oyaN22 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: Ribosomal_S15_2ECOD (1.6)
L [auth O2]Ribosomal_S11e7oyaO21 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_S11ECOD (1.6)
M [auth R2]Ribosomal_S17ee7oyaR21 A: alpha arraysX: HTHH: HTHT: FF domainF: Ribosomal_S17eECOD (1.6)
N [auth V2]Ribosomal_S21ee7oyaV21 A: a+b two layersX: 40S ribosomal protein rpS21 (S21e) (From Topology)H: 40S ribosomal protein rpS21 (S21e) (From Topology)T: 40S ribosomal protein rpS21 (S21e)F: Ribosomal_S21eECOD (1.6)
O [auth W2]Ribosomal_S8_N_1e7oyaW21 A: a+b two layersX: R3H domain-likeH: Ribosomal protein S8, N-terminal domain (From Topology)T: Ribosomal protein S8, N-terminal domainF: Ribosomal_S8_N_1ECOD (1.6)
O [auth W2]Ribosomal_S8_C_1e7oyaW22 A: a+b two layersX: Ribosomal protein S8, C-terminal domain (From Topology)H: Ribosomal protein S8, C-terminal domain (From Topology)T: Ribosomal protein S8, C-terminal domainF: Ribosomal_S8_C_1ECOD (1.6)
P [auth X2]Ribosom_S12_S23e7oyaX21 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosom_S12_S23ECOD (1.6)
Q [auth Y2]Ribosomal_S24ee7oyaY21 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_S24eECOD (1.6)
R [auth a2]Ribosomal_S26ee7oyaa21 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_S26eECOD (1.6)
S [auth b2]Ribosomal_S27ee7oyab21 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_S27eECOD (1.6)
B [auth A2]Ribosomal_S2_2e7oyaA21 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: Ribosomal_S2_2ECOD (1.6)
T [auth e2]Ribosomal_S30e7oyae21 A: extended segmentsX: 40S ribosomal protein S30 (S30e) (From Topology)H: 40S ribosomal protein S30 (S30e) (From Topology)T: 40S ribosomal protein S30 (S30e)F: Ribosomal_S30ECOD (1.6)
U [auth D2]Ribosomal_S3_Ce7oyaD21 A: a+b two layersX: T-foldH: Ribosomal protein S3-C (From Topology)T: Ribosomal protein S3-CF: Ribosomal_S3_CECOD (1.6)
U [auth D2]KH_2_3e7oyaD22 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: KH_2_3ECOD (1.6)
V [auth F2]Ribosomal_S7_1e7oyaF21 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: Ribosomal_S7_1ECOD (1.6)
W [auth K2]S10_plectine7oyaK21 A: alpha arraysX: HTHH: HTHT: wingedF: S10_plectinECOD (1.6)
X [auth P2]Ribosomal_S19e7oyaP21 A: a+b two layersX: Ribosomal protein S19 (From Topology)H: Ribosomal protein S19 (From Topology)T: Ribosomal protein S19F: Ribosomal_S19ECOD (1.6)
Y [auth Q2]Ribosomal_S9e7oyaQ21 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S9ECOD (1.6)
Z [auth U2]Ribosomal_S10_1e7oyaU21 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: Ribosomal_S10_1ECOD (1.6)
AA [auth c2]Ribosomal_S28ee7oyac21 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S28eECOD (1.6)
BA [auth d2]Ribosomal_S14_2e7oyad21 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_S14_2ECOD (1.6)
CA [auth g2]DUF1899e7oyag21 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 7-bladedF: DUF1899ECOD (1.6)
C [auth B2]Ribosomal_S3Ae_Ne7oyaB21 A: beta barrelsX: Ribosomal protein L25-likeH: 40S ribosomal protein S3A N-terminal domain (From Topology)T: 40S ribosomal protein S3A N-terminal domainF: Ribosomal_S3Ae_NECOD (1.6)
C [auth B2]Ribosomal_S3Ae_Ce7oyaB22 A: a+b two layersX: T-foldH: 40S ribosomal protein S3A C-terminal domain (From Topology)T: 40S ribosomal protein S3A C-terminal domainF: Ribosomal_S3Ae_CECOD (1.6)
DA [auth Z2]Ribosomal_S25e7oyaZ21 A: alpha arraysX: HTHH: HTHT: wingedF: Ribosomal_S25ECOD (1.6)
EA [auth T2]Ribosomal_S19ee7oyaT21 A: alpha arraysX: HTHH: HTHT: wingedF: Ribosomal_S19eECOD (1.6)
FA [auth S2]Ribosomal_S13e7oyaS21 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: Ribosomal_S13ECOD (1.6)
HA [auth Z1]Ribosomal_L27ee7oyaZ11 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L27eECOD (1.6)
IA [auth b1]Ribosomal_L29ee7oyab11 A: extended segmentsX: RPL29 (From Topology)H: RPL29 (From Topology)T: RPL29F: Ribosomal_L29eECOD (1.6)
JA [auth c1]Ribosomal_L7Aee7oyac11 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: Ribosomal_L7AeECOD (1.6)
KA [auth d1]Ribosomal_L31ee7oyad11 A: a+b two layersX: Ribosomal protein L31e-likeH: Ribosomal protein L31e/gp120 outer domain (From Topology)T: Ribosomal protein L31e/gp120 outer domainF: Ribosomal_L31eECOD (1.6)
LA [auth e1]Ribosomal_L32ee7oyae11 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L32e (From Topology)T: Ribosomal protein L32eF: Ribosomal_L32eECOD (1.6)
MA [auth f1]Ribosomal_L35Aee7oyaf11 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Ribosomal_L35AeECOD (1.6)
D [auth C2]Ribosomal_S5_C_1e7oyaC23 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S5_C_1ECOD (1.6)
D [auth C2]Ribosomal_S5_3e7oyaC22 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: Ribosomal_S5_3ECOD (1.6)
D [auth C2]Ribosomal_S5_2e7oyaC21 A: extended segmentsX: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)H: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)T: N-terminal region in 40S ribosomal protein rpS2 (S5p)F: Ribosomal_S5_2ECOD (1.6)
NA [auth g1]Ribosomal_L34ee7oyag11 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: RPL34 (From Topology)T: RPL34F: Ribosomal_L34eECOD (1.6)
OA [auth h1]Ribosomal_L29_2e7oyah11 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: Ribosomal_L29_2ECOD (1.6)
PA [auth i1]Ribosomal_L36ee7oyai11 A: alpha arraysX: 60S ribosomal protein rpL36 (L36e) (From Topology)H: 60S ribosomal protein rpL36 (L36e) (From Topology)T: 60S ribosomal protein rpL36 (L36e)F: Ribosomal_L36eECOD (1.6)
QA [auth j1]Ribosomal_L37ee7oyaj11 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L37eECOD (1.6)
RA [auth k1]Ribosomal_L38ee7oyak11 A: a+b two layersX: SRP9/14-likeH: Signal recognition particle alu RNA binding heterodimer SRP9/14-related (From Topology)T: Signal recognition particle alu RNA binding heterodimer SRP9/14-relatedF: Ribosomal_L38eECOD (1.6)
SA [auth o1]Ribosomal_L44e7oyao11 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L44ECOD (1.6)
TA [auth p1]Ribosomal_L37aee7oyap11 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L37aeECOD (1.6)
UA [auth A1]Ribosomal_L2_1e7oyaA12 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_L2_1ECOD (1.6)
UA [auth A1]Ribosomal_L2_C_2e7oyaA11 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L2_C_2ECOD (1.6)
VA [auth B1]Ribosomal_L3e7oyaB11 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Ribosomal_L3ECOD (1.6)
WA [auth C1]Ribosomal_L4e7oyaC11 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: Ribosomal_L4ECOD (1.6)
WA [auth C1]Ribos_L4_asso_Ce7oyaC12 A: extended segmentsX: C-terminal helical region in 60S ribosomal protein L4 (L4p) (From Topology)H: C-terminal helical region in 60S ribosomal protein L4 (L4p) (From Topology)T: C-terminal helical region in 60S ribosomal protein L4 (L4p)F: Ribos_L4_asso_CECOD (1.6)
E [auth E2]Ribosomal_S4ee7oyaE23 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S4eECOD (1.6)
E [auth E2]40S_S4_Ce7oyaE21 A: beta barrelsX: SH3H: SH3T: SH3F: 40S_S4_CECOD (1.6)
E [auth E2]RS4NTe7oyaE22 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: RS4NTECOD (1.6)
XA [auth D1]Ribosomal_L5ee7oyaD11 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_L5eECOD (1.6)
YA [auth E1]Ribosomal_L6ee7oyaE11 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L6eECOD (1.6)
ZA [auth F1]Ribosomal_L30_1e7oyaF11 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: Ribosomal_L30_1ECOD (1.6)
AB [auth G1]Ribosomal_L7Ae_1e7oyaG11 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: Ribosomal_L7Ae_1ECOD (1.6)
BB [auth H1]Ribosomal_L6_2e7oyaH11 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6_2ECOD (1.6)
BB [auth H1]Ribosomal_L6e7oyaH12 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6ECOD (1.6)
CB [auth J1]Ribosomal_L5_Ce7oyaJ11 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: Ribosomal_L5_CECOD (1.6)
DB [auth L1]Ribosomal_L13ee7oyaL11 A: extended segmentsX: RPL13 (From Topology)H: RPL13 (From Topology)T: RPL13F: Ribosomal_L13eECOD (1.6)
EB [auth M1]Ribosomal_L14ee7oyaM11 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L14eECOD (1.6)
FB [auth N1]Ribosomal_L15ee7oyaN11 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_L15eECOD (1.6)
GB [auth O1]Ribosomal_L13e7oyaO11 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: Ribosomal_L13ECOD (1.6)
F [auth G2]Ribosomal_S6ee7oyaG21 A: beta barrelsX: Ribosomal protein L25-likeH: Ribosomal protein L25-like (From Topology)T: Ribosomal protein L25-likeF: Ribosomal_S6eECOD (1.6)
HB [auth P1]Ribosomal_L22e7oyaP11 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: Ribosomal_L22ECOD (1.6)
IB [auth Q1]Ribosomal_L18e7oyaQ11 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: Ribosomal_L18ECOD (1.6)
JB [auth R1]Ribosomal_L19e_Ne7oyaR12 A: alpha arraysX: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)H: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)T: Ribosomal protein L19 (L19e) N-terminal domainF: Ribosomal_L19e_NECOD (1.6)
JB [auth R1]Ribosomal_L19e_Ce7oyaR11 A: alpha bundlesX: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)H: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)T: Ribosomal protein L19 (L19e) C-terminal domainF: Ribosomal_L19e_CECOD (1.6)
KB [auth T1]Ribosomal_L21ee7oyaT11 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L21eECOD (1.6)
LB [auth U1]Ribosomal_L22ee7oyaU11 A: a+b two layersX: Ribosomal protein L22e (From Topology)H: Ribosomal protein L22e (From Topology)T: Ribosomal protein L22eF: Ribosomal_L22eECOD (1.6)
MB [auth V1]Ribosomal_L14e7oyaV11 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_L14ECOD (1.6)
NB [auth W1]Ribosomal_L24ee7oyaW11 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_L24eECOD (1.6)
OB [auth X1]Ribosomal_L23_3e7oyaX11 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_L23_3ECOD (1.6)
PB [auth Y1]Ribosomal_L26e7oyaY11 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L26ECOD (1.6)
QB [auth l1]Ribosomal_L39e7oyal11 A: extended segmentsX: Ribosomal protein L39e (From Topology)H: Ribosomal protein L39e (From Topology)T: Ribosomal protein L39eF: Ribosomal_L39ECOD (1.6)
G [auth H2]Ribosomal_S7e_Ne7oyaH21 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: 40S ribosomal protein S7-A (From Topology)T: 40S ribosomal protein S7-AF: Ribosomal_S7e_NECOD (1.6)
G [auth H2]Ribosomal_S7e_C_1e7oyaH22 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: 40S ribosomal protein S7-A (From Topology)T: 40S ribosomal protein S7-AF: Ribosomal_S7e_C_1ECOD (1.6)
RB [auth n1]Ribosomal_L41e7oyan11 A: extended segmentsX: Ribosomal protein L41-A (From Topology)H: Ribosomal protein L41-A (From Topology)T: Ribosomal protein L41-AF: Ribosomal_L41ECOD (1.6)
SB [auth r1]Ribosomal_L28ee7oyar11 A: a+b two layersX: RPL28 (From Topology)H: RPL28 (From Topology)T: RPL28F: Ribosomal_L28eECOD (1.6)
TB [auth I1]Ribosomal_L16e7oyaI11 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: Ribosomal_L16ECOD (1.6)
UB [auth S1]Ribosomal_L18Ae7oyaS12 A: a+b two layersX: GP2-likeH: RplX-like (From Topology)T: RplX-likeF: Ribosomal_L18AECOD (1.6)
VB [auth m1]Ribosomal_L40ee7oyam11 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L40eECOD (1.6)
WB [auth a1]Ribosomal_L18e7oyaa11 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: Ribosomal_L18ECOD (1.6)
H [auth I2]Ribosomal_S8ee7oyaI21 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_S8eECOD (1.6)
CC [auth 11]eIF-5ae7oya111 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: eIF-5aECOD (1.6)
CC [auth 11]EFP_N_1e7oya112 A: beta barrelsX: SH3H: SH3T: SH3F: EFP_N_1ECOD (1.6)
I [auth J2]S4e7oyaJ21 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: S4ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
J [auth L2]PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17- Domain
K [auth N2]PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15- Domain
L [auth O2]PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
N [auth V2]PF01249Ribosomal protein S21e (Ribosomal_S21e)Ribosomal protein S21e- Family
O [auth W2]PF00410Ribosomal protein S8 (Ribosomal_S8)Ribosomal protein S8- Domain
P [auth X2]PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23- Family
Q [auth Y2]PF01282Ribosomal protein S24e (Ribosomal_S24e)Ribosomal protein S24e- Family
B [auth A2]PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
B [auth A2]PF1612240S ribosomal protein SA C-terminus (40S_SA_C)40S ribosomal protein SA C-terminus- Family
U [auth D2]PF07650KH domain (KH_2)KH domain- Domain
U [auth D2]PF00253Ribosomal protein S14p/S29e (Ribosomal_S14)Ribosomal protein S14p/S29e- Family
U [auth D2]PF00189Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)Ribosomal protein S3, C-terminal domainThis family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer.Domain
W [auth K2]PF03501Plectin/S10 domain (S10_plectin)Plectin/S10 domainThis presumed domain is found at the N-terminus of some isoforms of the cytoskeletal muscle protein plectin as well as the ribosomal S10 protein. This domain may be involved in RNA binding.Domain
X [auth P2]PF00203Ribosomal protein S19 (Ribosomal_S19)Ribosomal protein S19- Domain
Y [auth Q2]PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
Z [auth U2]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes.Domain
C [auth B2]PF01667Ribosomal protein S27 (Ribosomal_S27e)Ribosomal protein S27- Family
FA [auth S2]PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
HA [auth Z1]PF01777Ribosomal L27e protein family (Ribosomal_L27e)Ribosomal L27e protein family- Family
HA [auth Z1]PF00467KOW motif (KOW)KOW motif- Family
D [auth C2]PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domain- Domain
D [auth C2]PF01200Ribosomal protein S28e (Ribosomal_S28e)Ribosomal protein S28e- Family
D [auth C2]PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domain- Domain
UA [auth A1]PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domain- Domain
UA [auth A1]PF00181Ribosomal Proteins L2, RNA binding domain (Ribosomal_L2)Ribosomal Proteins L2, RNA binding domain- Domain
UA [auth A1]PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A- Family
VA [auth B1]PF01779Ribosomal L29e protein family (Ribosomal_L29e)Ribosomal L29e protein family- Family
WA [auth C1]PF1437460S ribosomal protein L4 C-terminal domain (Ribos_L4_asso_C)60S ribosomal protein L4 C-terminal domainThis family is found at the very C-terminal of 60 ribosomal L4 proteins.Domain
WA [auth C1]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
E [auth E2]PF00900Ribosomal family S4e (Ribosomal_S4e)Ribosomal family S4e- Family
E [auth E2]PF1612140S ribosomal protein S4 C-terminus (40S_S4_C)40S ribosomal protein S4 C-terminus- Family
E [auth E2]PF08071RS4NT (NUC023) domain (RS4NT)RS4NT (NUC023) domainThis is the N-terminal domain of Ribosomal S4 / S4e proteins. This domain is associated with S4 and KOW domains [1].Domain
E [auth E2]PF00467KOW motif (KOW)KOW motif- Family
XA [auth D1]PF17144Ribosomal large subunit proteins 60S L5, and 50S L18 (Ribosomal_L5e)Ribosomal large subunit proteins 60S L5, and 50S L18- Family
XA [auth D1]PF01198Ribosomal protein L31e (Ribosomal_L31e)Ribosomal protein L31e- Family
XA [auth D1]PF14204Ribosomal L18 C-terminal region (Ribosomal_L18_c)Ribosomal L18 C-terminal regionThis domain is the C-terminal end of ribosomal L18/L5 proteins.Domain
YA [auth E1]PF01655Ribosomal protein L32 (Ribosomal_L32e)Ribosomal protein L32- Family
YA [auth E1]PF01159Ribosomal protein L6e (Ribosomal_L6e)Ribosomal protein L6e- Family
ZA [auth F1]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7.Domain
ZA [auth F1]PF01247Ribosomal protein L35Ae (Ribosomal_L35Ae)Ribosomal protein L35Ae- Domain
BB [auth H1]PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
BB [auth H1]PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6- Domain
CB [auth J1]PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5- Domain
CB [auth J1]PF01907Ribosomal protein L37e (Ribosomal_L37e)Ribosomal protein L37e- Family
CB [auth J1]PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281.Domain
DB [auth L1]PF00832Ribosomal L39 protein (Ribosomal_L39)Ribosomal L39 protein- Family
DB [auth L1]PF01294Ribosomal protein L13e (Ribosomal_L13e)Ribosomal protein L13e- Family
EB [auth M1]PF01020Ribosomal L40e family (Ribosomal_L40e)Ribosomal L40e family- Family
EB [auth M1]PF01929Ribosomal protein L14 (Ribosomal_L14e)Ribosomal protein L14- Family
GB [auth O1]PF00935Ribosomal protein L44 (Ribosomal_L44)Ribosomal protein L44- Family
GB [auth O1]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
F [auth G2]PF01092Ribosomal protein S6e (Ribosomal_S6e)Ribosomal protein S6e- Family
F [auth G2]PF00400WD domain, G-beta repeat (WD40)WD domain, G-beta repeat- Repeat
HB [auth P1]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.Domain
HB [auth P1]PF01780Ribosomal L37ae protein family (Ribosomal_L37ae)Ribosomal L37ae protein family- Family
IB [auth Q1]PF17135Ribosomal protein 60S L18 and 50S L18e (Ribosomal_L18)Ribosomal protein 60S L18 and 50S L18e- Family
JB [auth R1]PF01778Ribosomal L28e protein family (Ribosomal_L28e)Ribosomal L28e protein family- Family
JB [auth R1]PF01280Ribosomal protein L19e (Ribosomal_L19e)Ribosomal protein L19e- Family
MB [auth V1]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23e- Domain
OB [auth X1]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
PB [auth Y1]PF16906Ribosomal proteins L26 eukaryotic, L24P archaeal (Ribosomal_L26)Ribosomal proteins L26 eukaryotic, L24P archaeal- Family
PB [auth Y1]PF00467KOW motif (KOW)KOW motif- Family
G [auth H2]PF01251Ribosomal protein S7e (Ribosomal_S7e)Ribosomal protein S7e- Family
TB [auth I1]PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10e- Domain
TB [auth I1]PF01158Ribosomal protein L36e (Ribosomal_L36e)Ribosomal protein L36e- Family
UB [auth S1]PF01775Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A (Ribosomal_L18A)Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18AThis family includes: archaeal 50S ribosomal protein L18Ae, often referred to as L20e or LX; fungal 60S ribosomal protein L20; and higher eukaryote 60S ribosomal protein L18A.Domain
H [auth I2]PF01201Ribosomal protein S8e (Ribosomal_S8e)Ribosomal protein S8e- Family
CC [auth 11]PF21485Translation initiation factor 5A-like, N-terminal (IF5A-like_N)Translation initiation factor 5A-like, N-terminalThis is the N-terminal domain of Translation initiation factor 5A from eukaryotes and archaea, which has a SH2-like fold. These proteins are involved in translation elongation and eIF5A is specifically required to promote peptide-bond formation betwe ...This is the N-terminal domain of Translation initiation factor 5A from eukaryotes and archaea, which has a SH2-like fold. These proteins are involved in translation elongation and eIF5A is specifically required to promote peptide-bond formation between consecutive proline residues [1-5]. This entry also includes Woronin body major protein Hex1, which is similar to eIF5A.
Domain
CC [auth 11]PF01287Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold (eIF-5a)Eukaryotic elongation factor 5A hypusine, DNA-binding OB foldeIF5A, previously thought to be an initiation factor, has been shown to be required for peptide chain elongation in yeast [1].Domain
I [auth J2]PF00163Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)Ribosomal protein S4/S9 N-terminal domain- Family
I [auth J2]PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth 22]18S rRNA---
J [auth L2]40S ribosomal protein S11
K [auth N2]40S ribosomal protein S13
L [auth O2]Ribosomal protein S14
M [auth R2]40S ribosomal protein S17
N [auth V2]40S ribosomal protein S21
O [auth W2]40S ribosomal protein S15a
P [auth X2]40S ribosomal protein S23
Q [auth Y2]40S ribosomal protein S24
R [auth a2]40S ribosomal protein S26
S [auth b2]40S ribosomal protein S27
B [auth A2]40S ribosomal protein SA
T [auth e2]40S ribosomal protein S30
U [auth D2]DNA-(apurinic or apyrimidinic site) lyase
V [auth F2]Ribosomal protein S5
W [auth K2]Ribosomal protein S10 -
X [auth P2]40S ribosomal protein S15
Y [auth Q2]Ribosomal protein S16
Z [auth U2]40S ribosomal protein S20
AA [auth c2]40S ribosomal protein S28
BA [auth d2]40S ribosomal protein S29
CA [auth g2]Guanine nucleotide-binding protein subunit beta-2-like 1
C [auth B2]40S ribosomal protein S3a
DA [auth Z2]40S ribosomal protein S25 -
EA [auth T2]40S ribosomal protein S19
FA [auth S2]40S ribosomal protein S18
GA [auth i2]Zgc:103482
HA [auth Z1]60S ribosomal protein L27
IA [auth b1]60S ribosomal protein L29
JA [auth c1]60S ribosomal protein L30 -
KA [auth d1]60S ribosomal protein L31
LA [auth e1]Ribosomal protein L32
MA [auth f1]60S ribosomal protein L35a
D [auth C2]40S ribosomal protein S2
NA [auth g1]60S ribosomal protein L34
OA [auth h1]60S ribosomal protein L35
PA [auth i1]60S ribosomal protein L36
QA [auth j1]Ribosomal protein L37
RA [auth k1]60S ribosomal protein L38
SA [auth o1]60S ribosomal protein L36a
TA [auth p1]Zgc:171772
UA [auth A1]60S ribosomal protein L8
VA [auth B1]Ribosomal protein L3
WA [auth C1]Ribosomal protein L4
E [auth E2]40S ribosomal protein S4, X isoform
XA [auth D1]Ribosomal protein L5b
YA [auth E1]60S ribosomal protein L6
ZA [auth F1]Ribosomal protein L7
AB [auth G1]60S ribosomal protein L7a
BB [auth H1]60S ribosomal protein L9
CB [auth J1]60S ribosomal protein L11
DB [auth L1]60S ribosomal protein L13
EB [auth M1]60S ribosomal protein L14
FB [auth N1]Ribosomal protein L15
GB [auth O1]60S ribosomal protein L13a
F [auth G2]40S ribosomal protein S6
HB [auth P1]60S ribosomal protein L17
IB [auth Q1]Ribosomal protein L18
JB [auth R1]60S ribosomal protein L19
KB [auth T1]60S ribosomal protein L21
LB [auth U1]Ribosomal protein L22
MB [auth V1]60S ribosomal protein L23
NB [auth W1]60S ribosomal protein L24- - -
OB [auth X1]Ribosomal protein L23a
PB [auth Y1]ATPase H+ transporting V0 subunit e1
QB [auth l1]Ribosomal protein L39
G [auth H2]40S ribosomal protein S7
RB [auth n1]60S ribosomal protein L41
SB [auth r1]60S ribosomal protein L28
TB [auth I1]60S ribosomal protein L10
UB [auth S1]60S ribosomal protein L18a
VB [auth m1]60S ribosomal protein L40
WB [auth a1]60S ribosomal protein L27a
XB [auth 51]28S rRNA---
YB [auth 71]5S rRNA---
ZB [auth 81]5.8S rRNA---
AC [auth q1]Novel protein similar to human proliferation-associated 2G4 protein (PA2G4)- - -
H [auth I2]40S ribosomal protein S8
BC [auth v2]Eukaryotic translation elongation factor 2
CC [auth 11]Eukaryotic translation initiation factor 5A
DC [auth s1]Dap1b -
I [auth J2]40S ribosomal protein S9

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
J [auth L2]IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
J [auth L2]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
J [auth L2]IPR000266Small ribosomal subunit protein uS17Family
J [auth L2]IPR032440Small ribosomal subunit protein uS17, N-terminalDomain
J [auth L2]IPR028333Small ribosomal subunit protein uS17, archaeal/eukaryoticFamily
K [auth N2]IPR012606Small ribosomal subunit protein uS15, N-terminalDomain
K [auth N2]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
K [auth N2]IPR023029Small ribosomal subunit protein uS15, archaea/eukaryotesFamily
K [auth N2]IPR000589Small ribosomal subunit protein uS15Family
L [auth O2]IPR001971Small ribosomal subunit protein uS11Family
L [auth O2]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
L [auth O2]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
M [auth R2]IPR036401Small ribosomal subunit protein eS17 superfamilyHomologous Superfamily
M [auth R2]IPR001210Small ribosomal subunit protein eS17Family
M [auth R2]IPR018273Small ribosomal subunit protein eS17, conserved siteConserved Site
N [auth V2]IPR038579Small ribosomal subunit protein eS21 superfamilyHomologous Superfamily
N [auth V2]IPR018279Small ribosomal subunit protein eS21, conserved siteConserved Site
N [auth V2]IPR001931Small ribosomal subunit protein eS21Family
O [auth W2]IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
O [auth W2]IPR000630Small ribosomal subunit protein uS8Family
O [auth W2]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
P [auth X2]IPR006032Small ribosomal subunit protein uS12Family
P [auth X2]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
P [auth X2]IPR005680Small ribosomal subunit protein uS12, eukaryotic/archaealFamily
Q [auth Y2]IPR053709Eukaryotic Ribosomal Protein eS24Homologous Superfamily
Q [auth Y2]IPR001976Small ribosomal subunit protein eS24Family
Q [auth Y2]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
Q [auth Y2]IPR018098Small ribosomal subunit protein eS24 conserved siteConserved Site
R [auth a2]IPR038551Ribosomal protein eS26 superfamilyHomologous Superfamily
R [auth a2]IPR000892Small ribosomal subunit protein eS26Family
R [auth a2]IPR047864Ribosomal protein eS26, conserved siteConserved Site
S [auth b2]IPR023407Small ribosomal subunit protein eS27, zinc-binding domain superfamilyHomologous Superfamily
S [auth b2]IPR000592Small ribosomal subunit protein eS27Family
S [auth b2]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
B [auth A2]IPR032281Small ribosomal subunit protein uS2, C-terminal domainDomain
B [auth A2]IPR027504Small ribosomal subunit protein uS2, vertebratesFamily
B [auth A2]IPR005707Small ribosomal subunit protein uS2, eukaryotic/archaealFamily
B [auth A2]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
B [auth A2]IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
B [auth A2]IPR001865Small ribosomal subunit protein uS2Family
B [auth A2]IPR027498Small ribosomal subunit protein uS2, eukaryoticFamily
T [auth e2]IPR039415Ubiquitin-like protein FUBIDomain
T [auth e2]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
T [auth e2]IPR000626Ubiquitin-like domainDomain
T [auth e2]IPR006846Small ribosomal subunit protein eS30Family
U [auth D2]IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
U [auth D2]IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
U [auth D2]IPR004044K Homology domain, type 2Domain
U [auth D2]IPR015946K homology domain-like, alpha/betaHomologous Superfamily
U [auth D2]IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
U [auth D2]IPR005703Small ribosomal subunit protein uS3, eukaryotic/archaealFamily
U [auth D2]IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site
V [auth F2]IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
V [auth F2]IPR000235Small ribosomal subunit protein uS7Family
V [auth F2]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
V [auth F2]IPR023798Small ribosomal subunit protein uS7 domainDomain
V [auth F2]IPR005716Ribosomal protein uS7, eukaryotic/archaealFamily
W [auth K2]IPR037447Small ribosomal subunit protein eS10Family
W [auth K2]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
W [auth K2]IPR005326Plectin/eS10, N-terminalDomain
X [auth P2]IPR002222Small ribosomal subunit protein uS19Family
X [auth P2]IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
X [auth P2]IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
X [auth P2]IPR005713Small ribosomal subunit protein uS19, eukaryotic/archaealFamily
Y [auth Q2]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
Y [auth Q2]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
Y [auth Q2]IPR000754Small ribosomal subunit protein uS9Family
Y [auth Q2]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
Z [auth U2]IPR001848Small ribosomal subunit protein uS10Family
Z [auth U2]IPR027486Small ribosomal subunit protein uS10 domainDomain
Z [auth U2]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
Z [auth U2]IPR005729Small ribosomal subunit protein uS10, eukaryotic/archaealFamily
Z [auth U2]IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site
AA [auth c2]IPR028626Ribosomal protein eS28 conserved siteConserved Site
AA [auth c2]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
AA [auth c2]IPR000289Small ribosomal subunit protein eS28Family
BA [auth d2]IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
BA [auth d2]IPR043140Small ribosomal subunit protein uS14 superfamilyHomologous Superfamily
BA [auth d2]IPR001209Small ribosomal subunit protein uS14Family
BA [auth d2]IPR039744Small ribosomal subunit protein uS14, eukaryotes/archaeaFamily
CA [auth g2]IPR019775WD40 repeat, conserved siteConserved Site
CA [auth g2]IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
CA [auth g2]IPR045223Small ribosomal subunit protein RACK1-likeFamily
CA [auth g2]IPR001680WD40 repeatRepeat
CA [auth g2]IPR020472G-protein beta WD-40 repeatRepeat
CA [auth g2]IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
C [auth B2]IPR001593Small ribosomal subunit protein eS1Family
C [auth B2]IPR018281Small ribosomal subunit protein eS1, conserved siteConserved Site
C [auth B2]IPR027500Small ribosomal subunit protein eS1, eukaryotesFamily
DA [auth Z2]IPR004977Small ribosomal subunit protein eS25Family
EA [auth T2]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
EA [auth T2]IPR018277Small ribosomal subunit protein eS19, conserved siteConserved Site
EA [auth T2]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
EA [auth T2]IPR001266Small ribosomal subunit protein eS19Family
FA [auth S2]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
FA [auth S2]IPR001892Small ribosomal subunit protein uS13Family
FA [auth S2]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
FA [auth S2]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
GA [auth i2]IPR039764RNA binding protein HABP4/SERBP1-likeFamily
GA [auth i2]IPR006861Hyaluronan/mRNA-binding proteinDomain
GA [auth i2]IPR032381Intracellular hyaluronan-binding protein 4, N-terminal domainDomain
HA [auth Z1]IPR018262Large ribosomal subunit protein eL27, conserved siteConserved Site
HA [auth Z1]IPR038655Large ribosomal subunit protein eL27 superfamilyHomologous Superfamily
HA [auth Z1]IPR005824KOWDomain
HA [auth Z1]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
HA [auth Z1]IPR001141Large ribosomal subunit protein eL27Family
HA [auth Z1]IPR041991Large ribosomal subunit protein eL27, KOW domainDomain
IA [auth b1]IPR002673Large ribosomal subunit protein eL29Family
JA [auth c1]IPR022991Large ribosomal subunit protein eL30, conserved siteConserved Site
JA [auth c1]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
JA [auth c1]IPR000231Large ribosomal subunit protein eL30Family
JA [auth c1]IPR039109Large ribosomal subunit protein eL30-likeFamily
JA [auth c1]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
KA [auth d1]IPR020052Large ribosomal subunit protein eL31, conserved siteConserved Site
KA [auth d1]IPR023621Large ribosomal subunit protein eL31 domain superfamilyHomologous Superfamily
KA [auth d1]IPR000054Large ribosomal subunit protein eL31Family
LA [auth e1]IPR036351Large ribosomal subunit protein eL32 superfamilyHomologous Superfamily
LA [auth e1]IPR001515Large ribosomal subunit protein eL32Family
LA [auth e1]IPR018263Large ribosomal subunit protein eL32, conserved siteConserved Site
MA [auth f1]IPR038661Large ribosomal subunit protein eL33 superfamilyHomologous Superfamily
MA [auth f1]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
MA [auth f1]IPR001780Large ribosomal subunit protein eL33Family
MA [auth f1]IPR018266Large ribosomal subunit protein eL33, conserved siteConserved Site
D [auth C2]IPR000851Small ribosomal subunit protein uS5Family
D [auth C2]IPR005711Small ribosomal subunit protein uS5, eukaryotic/archaealFamily
D [auth C2]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
D [auth C2]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
D [auth C2]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
D [auth C2]IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
D [auth C2]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
NA [auth g1]IPR008195Large ribosomal subunit protein eL34Family
NA [auth g1]IPR018065Large ribosomal subunit protein eL34, conserved siteConserved Site
OA [auth h1]IPR045059Large ribosomal subunit protein uL29, eukaryotesFamily
OA [auth h1]IPR001854Large ribosomal subunit protein uL29Family
OA [auth h1]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
OA [auth h1]IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
PA [auth i1]IPR000509Large ribosomal subunit protein eL36Family
PA [auth i1]IPR038097Large ribosomal subunit protein eL36 domain superfamilyHomologous Superfamily
QA [auth j1]IPR001569Large ribosomal subunit protein eL37Family
QA [auth j1]IPR018267Large ribosomal subunit protein eL37, conserved siteConserved Site
QA [auth j1]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
QA [auth j1]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
RA [auth k1]IPR002675Large ribosomal subunit protein eL38Family
RA [auth k1]IPR038464Large ribosomal subunit protein eL38 superfamilyHomologous Superfamily
SA [auth o1]IPR053708Eukaryotic Ribosomal Large Subunit eL42Homologous Superfamily
SA [auth o1]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
SA [auth o1]IPR000552Large ribosomal subunit protein eL42Family
TA [auth p1]IPR002674Large ribosomal subunit protein eL43Family
TA [auth p1]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
TA [auth p1]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
UA [auth A1]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
UA [auth A1]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
UA [auth A1]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
UA [auth A1]IPR023672Large ribosomal subunit protein uL2, archaeal-typeFamily
UA [auth A1]IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
UA [auth A1]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
UA [auth A1]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
UA [auth A1]IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
UA [auth A1]IPR002171Large ribosomal subunit protein uL2Family
VA [auth B1]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
VA [auth B1]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
VA [auth B1]IPR045077Large ribosomal subunit protein uL3, archaeal/eukaryotic-typeFamily
VA [auth B1]IPR044892Ribosomal protein L3, domain 3, archaeal-type superfamilyHomologous Superfamily
VA [auth B1]IPR000597Large ribosomal subunit protein uL3Family
WA [auth C1]IPR025755Large ribosomal subunit protein uL4, C-terminal domainDomain
WA [auth C1]IPR002136Large ribosomal subunit protein uL4Family
WA [auth C1]IPR045240Large ribosomal subunit protein uL4, eukaryotic and archaeal typeFamily
WA [auth C1]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
E [auth E2]IPR018199Small ribosomal subunit protein eS4, N-terminal, conserved siteConserved Site
E [auth E2]IPR013843Small ribosomal subunit protein eS4, N-terminalDomain
E [auth E2]IPR032277Small ribosomal subunit protein eS4, C-terminal domainDomain
E [auth E2]IPR002942RNA-binding S4 domainDomain
E [auth E2]IPR013845Small ribosomal subunit protein eS4, central regionDomain
E [auth E2]IPR000876Small ribosomal subunit protein eS4Family
E [auth E2]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
E [auth E2]IPR038237Small ribosomal subunit protein eS4, central domain superfamilyHomologous Superfamily
E [auth E2]IPR041982Small ribosomal subunit protein eS4, KOW domainDomain
E [auth E2]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
E [auth E2]IPR005824KOWDomain
XA [auth D1]IPR005485Large ribosomal subunit protein uL18 eukaryotic/archaealFamily
XA [auth D1]IPR025607Large ribosomal subunit protein uL18, C-terminal, eukaryotesDomain
YA [auth E1]IPR005568Large ribosomal subunit protein uL6, N-terminalDomain
YA [auth E1]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
YA [auth E1]IPR041997Large ribosomal subunit protein eL6, KOW domainDomain
YA [auth E1]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
YA [auth E1]IPR000915Large ribosomal subunit protein eL6Family
ZA [auth F1]IPR035808Large ribosomal subunit protein uL30, eukaryotic/archaealDomain
ZA [auth F1]IPR012988Large ribosomal subunit protein uL30, N-terminal, eukaryotesDomain
ZA [auth F1]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
ZA [auth F1]IPR039699Large ribosomal subunit protein uL30Family
ZA [auth F1]IPR005998Large ribosomal subunit protein uL30, eukaryoticFamily
ZA [auth F1]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
ZA [auth F1]IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
AB [auth G1]IPR050257Large ribosomal subunit protein eL8/uL1-likeFamily
AB [auth G1]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
AB [auth G1]IPR004037Large ribosomal subunit protein eL8-like, conserved siteConserved Site
AB [auth G1]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
AB [auth G1]IPR001921Large ribosomal subunit protein eL8, eukaryotaFamily
AB [auth G1]IPR018492Ribosomal protein eL8/Nhp2 familyFamily
BB [auth H1]IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
BB [auth H1]IPR002359Large ribosomal subunit protein uL6, conserved site-2Conserved Site
BB [auth H1]IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
BB [auth H1]IPR000702Large ribosomal subunit protein uL6-likeFamily
CB [auth J1]IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
CB [auth J1]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
CB [auth J1]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
CB [auth J1]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
CB [auth J1]IPR002132Large ribosomal subunit protein uL5Family
DB [auth L1]IPR001380Large ribosomal subunit protein eL13Family
DB [auth L1]IPR018256Large ribosomal subunit protein eL13, conserved siteConserved Site
EB [auth M1]IPR039660Large ribosomal subunit protein eL14Family
EB [auth M1]IPR041985Large ribosomal subunit protein eL14, KOW motifDomain
EB [auth M1]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
EB [auth M1]IPR002784Large ribosomal subunit protein eL14 domainDomain
EB [auth M1]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
FB [auth N1]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
FB [auth N1]IPR020925Large ribosomal subunit protein eL15, conserved siteConserved Site
FB [auth N1]IPR024794Large ribosomal subunit protein eL15 core domain superfamilyHomologous Superfamily
FB [auth N1]IPR000439Large ribosomal subunit protein eL15Family
GB [auth O1]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
GB [auth O1]IPR005822Large ribosomal subunit protein uL13Family
GB [auth O1]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
GB [auth O1]IPR005755Large ribosomal subunit protein uL13, eukaryotic/archaealFamily
F [auth G2]IPR014401Small ribosomal subunit protein eS6-likeFamily
F [auth G2]IPR001377Small ribosomal subunit protein eS6Family
F [auth G2]IPR018282Small ribosomal subunit protein eS6, conserved siteConserved Site
HB [auth P1]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
HB [auth P1]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
HB [auth P1]IPR001063Large ribosomal subunit protein uL22Family
HB [auth P1]IPR005721Large ribosomal subunit protein uL22, eukaryotic/archaealFamily
IB [auth Q1]IPR021131Large ribosomal subunit protein uL15/eL18Domain
IB [auth Q1]IPR021132Large ribosomal subunit protein eL18, conserved siteConserved Site
IB [auth Q1]IPR000039Large ribosomal subunit protein eL18Family
IB [auth Q1]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
JB [auth R1]IPR015972Large ribosomal subunit protein eL19, domain 1Homologous Superfamily
JB [auth R1]IPR039547Large ribosomal subunit protein eL19Family
JB [auth R1]IPR023638Large ribosomal subunit protein eL19, conserved siteConserved Site
JB [auth R1]IPR035970Large ribosomal subunit protein eL19 superfamilyHomologous Superfamily
JB [auth R1]IPR000196Large ribosomal subunit protein eL19 domainDomain
JB [auth R1]IPR033935Large ribosomal subunit protein eL19, eukaryoticDomain
KB [auth T1]IPR018259Large ribosomal subunit protein eL21, conserved siteConserved Site
KB [auth T1]IPR036948Large ribosomal subunit protein eL21 superfamilyHomologous Superfamily
KB [auth T1]IPR001147Large ribosomal subunit protein eL21Family
KB [auth T1]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
LB [auth U1]IPR038526Large ribosomal subunit protein eL22 superfamilyHomologous Superfamily
LB [auth U1]IPR002671Large ribosomal subunit protein eL22Family
MB [auth V1]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
MB [auth V1]IPR000218Large ribosomal subunit protein uL14Family
MB [auth V1]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
NB [auth W1]IPR011017TRASH domainDomain
NB [auth W1]IPR000988Large ribosomal subunit protein eL24-relatedFamily
NB [auth W1]IPR023442Large ribosomal subunit protein eL24, conserved siteConserved Site
NB [auth W1]IPR038630Ribosomal protein L24e/L24 superfamilyHomologous Superfamily
OB [auth X1]IPR019985Large ribosomal subunit protein uL23Family
OB [auth X1]IPR001014Large ribosomal subunit protein uL23, conserved siteConserved Site
OB [auth X1]IPR013025Large ribosomal subunit protein uL23-likeFamily
OB [auth X1]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
OB [auth X1]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
OB [auth X1]IPR005633Large ribosomal subunit protein uL23, N-terminalDomain
PB [auth Y1]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
PB [auth Y1]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
PB [auth Y1]IPR005756Large ribosomal subunit protein uL24, eukaryotic/archaealFamily
PB [auth Y1]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
PB [auth Y1]IPR005824KOWDomain
PB [auth Y1]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
QB [auth l1]IPR023626Large ribosomal subunit protein eL39 domain superfamilyHomologous Superfamily
QB [auth l1]IPR000077Large ribosomal subunit protein eL39Family
QB [auth l1]IPR020083Large ribosomal subunit protein eL39, conserved siteConserved Site
G [auth H2]IPR000554Small ribosomal subunit protein eS7Family
G [auth H2]IPR047861Small ribosomal subunit protein eS7, conserved siteConserved Site
RB [auth n1]IPR007836Large ribosomal subunit protein eS32Family
SB [auth r1]IPR029004Ribosomal eL28/Mak16Domain
SB [auth r1]IPR002672Large ribosomal subunit protein eL28Family
TB [auth I1]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
TB [auth I1]IPR001197Large ribosomal subunit protein uL16, eukaryotes/archaeaFamily
TB [auth I1]IPR047873Large ribosomal subunit protein uL16Family
TB [auth I1]IPR018255Large ribosomal subunit protein uL16, conserved site, eukaryotes/archaeaConserved Site
TB [auth I1]IPR016180Large ribosomal subunit protein uL16 domainDomain
UB [auth S1]IPR028877Large ribosomal subunit protein eL20Family
UB [auth S1]IPR023573Large ribosomal subunit protein eL20 domainDomain
UB [auth S1]IPR021138Large ribosomal subunit protein eL20, eukaryotesFamily
VB [auth m1]IPR019954Ubiquitin conserved siteConserved Site
VB [auth m1]IPR038587Large ribosomal subunit protein eL40 superfamilyHomologous Superfamily
VB [auth m1]IPR000626Ubiquitin-like domainDomain
VB [auth m1]IPR019956Ubiquitin domainDomain
VB [auth m1]IPR050158Ubiquitin and ubiquitin-likeFamily
VB [auth m1]IPR001975Large ribosomal subunit protein eL40 domainDomain
VB [auth m1]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
VB [auth m1]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
WB [auth a1]IPR027386Ribosomal uL15, N-terminalHomologous Superfamily
WB [auth a1]IPR021131Large ribosomal subunit protein uL15/eL18Domain
WB [auth a1]IPR030878Large ribosomal subunit protein uL15Family
WB [auth a1]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
WB [auth a1]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
AC [auth q1]IPR018349Peptidase M24A, methionine aminopeptidase, subfamily 2, binding siteBinding Site
AC [auth q1]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
AC [auth q1]IPR047113Proliferation-associated protein 2G4/ARX1Family
AC [auth q1]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
AC [auth q1]IPR036005Creatinase/aminopeptidase-likeHomologous Superfamily
AC [auth q1]IPR004545PA2G4 familyFamily
AC [auth q1]IPR000994Peptidase M24Domain
H [auth I2]IPR022309Ribosomal protein eS8/ribosomal biogenesis NSA2Family
H [auth I2]IPR018283Small ribosomal subunit protein eS8, conserved siteConserved Site
H [auth I2]IPR001047Small ribosomal subunit protein eS8Family
BC [auth v2]IPR005225Small GTP-binding domainDomain
BC [auth v2]IPR005517Translation elongation factor EFG/EF2, domain IVDomain
BC [auth v2]IPR000795Translational (tr)-type GTP-binding domainDomain
BC [auth v2]IPR000640Elongation factor EFG, domain V-likeDomain
BC [auth v2]IPR031157Tr-type G domain, conserved siteConserved Site
BC [auth v2]IPR035647EF-G domain III/V-likeHomologous Superfamily
BC [auth v2]IPR041095Elongation Factor G, domain IIDomain
BC [auth v2]IPR004161Translation elongation factor EFTu-like, domain 2Domain
BC [auth v2]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
BC [auth v2]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
BC [auth v2]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
BC [auth v2]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
CC [auth 11]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
CC [auth 11]IPR020189Translation elongation factor, IF5A C-terminalDomain
CC [auth 11]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
CC [auth 11]IPR019769Translation elongation factor, IF5A, hypusine sitePTM
CC [auth 11]IPR001884Translation elongation factor IF5A-likeFamily
CC [auth 11]IPR048670Translation initiation factor 5A-like, N-terminalDomain
CC [auth 11]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
DC [auth s1]IPR024130DAP1/DAPL1Family
I [auth J2]IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
I [auth J2]IPR002942RNA-binding S4 domainDomain
I [auth J2]IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
I [auth J2]IPR005710Small ribosomal subunit protein uS4, eukaryotic/archaealFamily
I [auth J2]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
I [auth J2]IPR022801Small ribosomal subunit protein uS4Family