Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
J [auth K]SCOP2B SuperfamilySubunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8105493 3000787 SCOP2B (2022-06-29)
T [auth V]SCOP2 FamilySubunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8105492 4002065 SCOP2 (2022-06-29)
T [auth V]SCOP2 SuperfamilySubunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8105493 3000787 SCOP2 (2022-06-29)
W [auth a]SCOP2 FamilyCytochrome c oxidase subunit I-like 8105416 4001989 SCOP2 (2022-06-29)
W [auth a]SCOP2 SuperfamilyCytochrome c oxidase subunit I-like 8105417 3000653 SCOP2 (2022-06-29)
Y [auth c]SCOP2B SuperfamilyCytochrome c oxidase subunit III-like 8105419 3000671 SCOP2B (2022-06-29)
Z [auth d]SCOP2 FamilyMitochondrial cytochrome c oxidase subunit IV 8105436 4001940 SCOP2 (2022-06-29)
Z [auth d]SCOP2 SuperfamilyMitochondrial cytochrome c oxidase subunit IV 8105437 3000582 SCOP2 (2022-06-29)
AA [auth e]SCOP2 FamilyCytochrome c oxidase subunit E 8105430 4001366 SCOP2 (2022-06-29)
AA [auth e]SCOP2 SuperfamilyCytochrome c oxidase subunit E 8105431 3001402 SCOP2 (2022-06-29)
BA [auth f]SCOP2B SuperfamilyRubredoxin-like 8105435 3001257 SCOP2B (2022-06-29)
CA [auth g]SCOP2B SuperfamilyMitochondrial cytochrome c oxidase subunit VIa 8105441 3000592 SCOP2B (2022-06-29)
DA [auth h]SCOP2 FamilyCytochrome c oxidase subunit h 8105444 4000996 SCOP2 (2022-06-29)
DA [auth h]SCOP2 SuperfamilyCytochrome c oxidase subunit h 8105445 3000395 SCOP2 (2022-06-29)
EA [auth i]SCOP2B SuperfamilyMitochondrial cytochrome c oxidase subunit VIc 8105491 3000598 SCOP2B (2022-06-29)
FA [auth k]SCOP2 FamilyMitochondrial cytochrome c oxidase subunit VIIb 8105446 4001959 SCOP2 (2022-06-29)
FA [auth k]SCOP2 SuperfamilyMitochondrial cytochrome c oxidase subunit VIIb 8105447 3000613 SCOP2 (2022-06-29)
GA [auth l]SCOP2 FamilyMitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa) 8105432 4001966 SCOP2 (2022-06-29)
GA [auth l]SCOP2 SuperfamilyMitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa) 8105433 3000624 SCOP2 (2022-06-29)
HA [auth m]SCOP2 FamilyMitochondrial cytochrome c oxidase subunit VIIIb (aka IX) 8105442 4001973 SCOP2 (2022-06-29)
HA [auth m]SCOP2 SuperfamilyMitochondrial cytochrome c oxidase subunit VIIIb (aka IX) 8105443 3000633 SCOP2 (2022-06-29)
FSCOP2 Family14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8105496 4002070 SCOP2 (2022-06-29)
FSCOP2 Superfamily14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8105497 3000797 SCOP2 (2022-06-29)
GSCOP2B SuperfamilyUbiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8105495 3000770 SCOP2B (2022-06-29)
Q [auth R]SCOP2B SuperfamilyUbiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8105495 3000770 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyNon-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8105459 3000806 SCOP2B (2022-06-29)
R [auth S]SCOP2B SuperfamilyNon-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8105459 3000806 SCOP2B (2022-06-29)
I [auth J]SCOP2B SuperfamilySubunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8105489 3000779 SCOP2B (2022-06-29)
S [auth U]SCOP2B SuperfamilySubunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 8105489 3000779 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APeptidase_M16_Ce7o3cA2 A: a+b two layersX: LuxS, MPP, ThrRS/AlaRS common domainH: LuxS, MPP, ThrRS/AlaRS common domainT: LuxS/MPP-like metallohydrolaseF: Peptidase_M16_CECOD (1.6)
APeptidase_M16e7o3cA1 A: a+b two layersX: LuxS, MPP, ThrRS/AlaRS common domainH: LuxS, MPP, ThrRS/AlaRS common domainT: LuxS/MPP-like metallohydrolaseF: Peptidase_M16ECOD (1.6)
K [auth L]Peptidase_M16_Ce7o3cL2 A: a+b two layersX: LuxS, MPP, ThrRS/AlaRS common domainH: LuxS, MPP, ThrRS/AlaRS common domainT: LuxS/MPP-like metallohydrolaseF: Peptidase_M16_CECOD (1.6)
K [auth L]Peptidase_M16e7o3cL1 A: a+b two layersX: LuxS, MPP, ThrRS/AlaRS common domainH: LuxS, MPP, ThrRS/AlaRS common domainT: LuxS/MPP-like metallohydrolaseF: Peptidase_M16ECOD (1.6)
J [auth K]UCR_6-4kDe7o3cK1 A: extended segmentsX: Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: UCR_6-4kDECOD (1.6)
T [auth V]UCR_6-4kDe7o3cV1 A: extended segmentsX: Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: Subunit XI (6.4 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: UCR_6-4kDECOD (1.6)
U [auth T]Ubiq-Cytc-red_Ne7o3cT1 A: extended segmentsX: Ubiquinol-cytochrome c reductase 8 kDa protein (From Topology)H: Ubiquinol-cytochrome c reductase 8 kDa protein (From Topology)T: Ubiquinol-cytochrome c reductase 8 kDa proteinF: Ubiq-Cytc-red_NECOD (1.6)
W [auth a]COX1e7o3ca1 A: alpha superhelicesX: Cytochrome c oxidase subunit I-likeH: Cytochrome c oxidase subunit I-like (From Topology)T: Cytochrome c oxidase subunit I-likeF: COX1ECOD (1.6)
X [auth b]COX2e7o3cb1 A: beta sandwichesX: Cupredoxin-likeH: Cupredoxin-related (From Topology)T: Cupredoxin-relatedF: COX2ECOD (1.6)
X [auth b]COX2_TMe7o3cb2 A: extended segmentsX: Cytochrome c oxidase subunit II-like, transmembrane region (From Topology)H: Cytochrome c oxidase subunit II-like, transmembrane region (From Topology)T: Cytochrome c oxidase subunit II-like, transmembrane regionF: COX2_TMECOD (1.6)
Y [auth c]COX3e7o3cc1 A: alpha bundlesX: Cytochrome c oxidase subunit III-like (From Topology)H: Cytochrome c oxidase subunit III-like (From Topology)T: Cytochrome c oxidase subunit III-likeF: COX3ECOD (1.6)
Z [auth d]COX4e7o3cd1 A: extended segmentsX: Mitochondrial cytochrome c oxidase subunit IV (From Topology)H: Mitochondrial cytochrome c oxidase subunit IV (From Topology)T: Mitochondrial cytochrome c oxidase subunit IVF: COX4ECOD (1.6)
AA [auth e]COX5Ae7o3ce1 A: alpha superhelicesX: Repetitive alpha hairpinsH: Cytochrome c oxidase subunit E (From Topology)T: Cytochrome c oxidase subunit EF: COX5AECOD (1.6)
BA [auth f]COX5Be7o3cf1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Cytochrome c oxidase Subunit FF: COX5BECOD (1.6)
CA [auth g]COX6Ae7o3cg1 A: extended segmentsX: Mitochondrial cytochrome c oxidase subunit VIa (From Topology)H: Mitochondrial cytochrome c oxidase subunit VIa (From Topology)T: Mitochondrial cytochrome c oxidase subunit VIaF: COX6AECOD (1.6)
BPeptidase_M16_Ce7o3cB2 A: a+b two layersX: LuxS, MPP, ThrRS/AlaRS common domainH: LuxS, MPP, ThrRS/AlaRS common domainT: LuxS/MPP-like metallohydrolaseF: Peptidase_M16_CECOD (1.6)
BPeptidase_M16e7o3cB1 A: a+b two layersX: LuxS, MPP, ThrRS/AlaRS common domainH: LuxS, MPP, ThrRS/AlaRS common domainT: LuxS/MPP-like metallohydrolaseF: Peptidase_M16ECOD (1.6)
L [auth M]Peptidase_M16_Ce7o3cM2 A: a+b two layersX: LuxS, MPP, ThrRS/AlaRS common domainH: LuxS, MPP, ThrRS/AlaRS common domainT: LuxS/MPP-like metallohydrolaseF: Peptidase_M16_CECOD (1.6)
L [auth M]Peptidase_M16e7o3cM1 A: a+b two layersX: LuxS, MPP, ThrRS/AlaRS common domainH: LuxS, MPP, ThrRS/AlaRS common domainT: LuxS/MPP-like metallohydrolaseF: Peptidase_M16ECOD (1.6)
DA [auth h]COX6Be7o3ch1 A: few secondary structure elementsX: Cytochrome c oxidase subunit h (From Topology)H: Cytochrome c oxidase subunit h (From Topology)T: Cytochrome c oxidase subunit hF: COX6BECOD (1.6)
EA [auth i]COX6Ce7o3ci1 A: extended segmentsX: Mitochondrial cytochrome c oxidase subunit VIc (From Topology)H: Mitochondrial cytochrome c oxidase subunit VIc (From Topology)T: Mitochondrial cytochrome c oxidase subunit VIcF: COX6CECOD (1.6)
FA [auth k]COX7Be7o3ck1 A: extended segmentsX: Mitochondrial cytochrome c oxidase subunit VIIb (From Topology)H: Mitochondrial cytochrome c oxidase subunit VIIb (From Topology)T: Mitochondrial cytochrome c oxidase subunit VIIbF: COX7BECOD (1.6)
GA [auth l]COX7Ce7o3cl1 A: extended segmentsX: Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa) (From Topology)H: Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa) (From Topology)T: Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa)F: COX7CECOD (1.6)
HA [auth m]COX8e7o3cm1 A: extended segmentsX: Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX) (From Topology)H: Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX) (From Topology)T: Mitochondrial cytochrome c oxidase subunit VIIIb (aka IX)F: COX8ECOD (1.6)
CCytochrom_B_Ce7o3cC2 A: alpha bundlesX: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: Cytochrom_B_CECOD (1.6)
CCytochrome_Be7o3cC1 A: alpha bundlesX: Transmembrane heme-binding four-helical bundle (From Homology)H: Transmembrane heme-binding four-helical bundleT: Transmembrane di-heme cytochromesF: Cytochrome_BECOD (1.6)
M [auth N]Cytochrom_B_Ce7o3cN2 A: alpha bundlesX: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: Cytochrom_B_CECOD (1.6)
M [auth N]Cytochrome_Be7o3cN1 A: alpha bundlesX: Transmembrane heme-binding four-helical bundle (From Homology)H: Transmembrane heme-binding four-helical bundleT: Transmembrane di-heme cytochromesF: Cytochrome_BECOD (1.6)
DCytochrom_C1_Ne7o3cD1 A: alpha arraysX: Cytochrome c-likeH: Cytochrome c (From Topology)T: Cytochrome cF: Cytochrom_C1_NECOD (1.6)
DCytochrom_C1_Ce7o3cD2 A: extended segmentsX: cytochrome c1 transmembrane anchor (From Topology)H: cytochrome c1 transmembrane anchor (From Topology)T: cytochrome c1 transmembrane anchorF: Cytochrom_C1_CECOD (1.6)
N [auth O]Cytochrom_C1_Ne7o3cO1 A: alpha arraysX: Cytochrome c-likeH: Cytochrome c (From Topology)T: Cytochrome cF: Cytochrom_C1_NECOD (1.6)
N [auth O]Cytochrom_C1_Ce7o3cO2 A: extended segmentsX: cytochrome c1 transmembrane anchor (From Topology)H: cytochrome c1 transmembrane anchor (From Topology)T: cytochrome c1 transmembrane anchorF: Cytochrom_C1_CECOD (1.6)
ERieske_cytochrome_bc1e7o3cE1 A: beta sandwichesX: ISP domain (From Topology)H: ISP domain (From Topology)T: ISP domainF: Rieske_cytochrome_bc1ECOD (1.6)
ERieske_6e7o3cE3 A: few secondary structure elementsX: Trm112p-like (From Topology)H: Trm112p-like (From Topology)T: Trm112p-likeF: Rieske_6ECOD (1.6)
EUCR_TMe7o3cE2 A: extended segmentsX: iron-sulfur subunit (ISP) transmembrane anchor (From Topology)H: iron-sulfur subunit (ISP) transmembrane anchor (From Topology)T: iron-sulfur subunit (ISP) transmembrane anchorF: UCR_TMECOD (1.6)
O [auth P]Rieske_cytochrome_bc1e7o3cP1 A: beta sandwichesX: ISP domain (From Topology)H: ISP domain (From Topology)T: ISP domainF: Rieske_cytochrome_bc1ECOD (1.6)
O [auth P]Rieske_6e7o3cP3 A: few secondary structure elementsX: Trm112p-like (From Topology)H: Trm112p-like (From Topology)T: Trm112p-likeF: Rieske_6ECOD (1.6)
O [auth P]UCR_TMe7o3cP2 A: extended segmentsX: iron-sulfur subunit (ISP) transmembrane anchor (From Topology)H: iron-sulfur subunit (ISP) transmembrane anchor (From Topology)T: iron-sulfur subunit (ISP) transmembrane anchorF: UCR_TMECOD (1.6)
FUCR_14kDe7o3cF1 A: alpha arraysX: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: UCR_14kDECOD (1.6)
P [auth Q]UCR_14kDe7o3cQ1 A: alpha arraysX: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: 14 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: UCR_14kDECOD (1.6)
GUcrQe7o3cG1 A: extended segmentsX: Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: UcrQECOD (1.6)
Q [auth R]UcrQe7o3cR1 A: extended segmentsX: Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: Ubiquinone-binding protein QP-C of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: UcrQECOD (1.6)
HUCR_hingee7o3cH1 A: alpha bundlesX: cytochrome bc1 complex 11 kDa protein-likeH: Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: UCR_hingeECOD (1.6)
R [auth S]UCR_hingee7o3cS1 A: alpha bundlesX: cytochrome bc1 complex 11 kDa protein-likeH: Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: UCR_hingeECOD (1.6)
I [auth J]UCR_UQCRX_QCR9e7o3cJ1 A: extended segmentsX: Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: UCR_UQCRX_QCR9ECOD (1.6)
S [auth U]UCR_UQCRX_QCR9e7o3cU1 A: extended segmentsX: Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)H: Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) (From Topology)T: Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)F: UCR_UQCRX_QCR9ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A,
K [auth L]
PF05193Peptidase M16 inactive domain (Peptidase_M16_C)Peptidase M16 inactive domainPeptidase M16 consists of two structurally related domains. One is the active peptidase, whereas the other is inactive. The two domains hold the substrate like a clamp [1].Domain
A,
K [auth L]
PF00675Insulinase (Peptidase family M16) (Peptidase_M16)Insulinase (Peptidase family M16)- Family
A,
K [auth L]
PF00115Cytochrome C and Quinol oxidase polypeptide I (COX1)Cytochrome C and Quinol oxidase polypeptide I- Family
J [auth K],
T [auth V]
PF08997Ubiquinol-cytochrome C reductase complex, 6.4kD protein (UCR_6-4kD)Ubiquinol-cytochrome C reductase complex, 6.4kD proteinThe ubiquinol-cytochrome C reductase complex (cytochrome bc1 complex) is an essential component of the mitochondrial cellular respiratory chain. This family represents the 6.4kD protein, which may be closely linked to the iron-sulphur protein in the ...The ubiquinol-cytochrome C reductase complex (cytochrome bc1 complex) is an essential component of the mitochondrial cellular respiratory chain. This family represents the 6.4kD protein, which may be closely linked to the iron-sulphur protein in the complex and function as an iron-sulphur protein binding factor [1].
Domain
U [auth T]PF09165Ubiquinol-cytochrome c reductase 8 kDa, N-terminal (Ubiq-Cytc-red_N)Ubiquinol-cytochrome c reductase 8 kDa, N-terminalMembers of this family adopt a structure consisting of many antiparallel beta sheets, with few alpha helices, in a non-globular arrangement. They are required for proper functioning of the respiratory chain [1].Domain
V [auth I]PF02937Cytochrome c oxidase subunit VIc (COX6C)Cytochrome c oxidase subunit VIc- Family
V [auth I]PF02238Cytochrome c oxidase subunit VII (COX7a)Cytochrome c oxidase subunit VII- Family
B,
L [auth M]
PF00116Cytochrome C oxidase subunit II, periplasmic domain (COX2)Cytochrome C oxidase subunit II, periplasmic domain- Domain
B,
L [auth M]
PF05193Peptidase M16 inactive domain (Peptidase_M16_C)Peptidase M16 inactive domainPeptidase M16 consists of two structurally related domains. One is the active peptidase, whereas the other is inactive. The two domains hold the substrate like a clamp [1].Domain
B,
L [auth M]
PF02285Cytochrome oxidase c subunit VIII (COX8)Cytochrome oxidase c subunit VIII- Family
B,
L [auth M]
PF02790Cytochrome C oxidase subunit II, transmembrane domain (COX2_TM)Cytochrome C oxidase subunit II, transmembrane domain- Family
B,
L [auth M]
PF00675Insulinase (Peptidase family M16) (Peptidase_M16)Insulinase (Peptidase family M16)- Family
C,
M [auth N]
PF00032Cytochrome b(C-terminal)/b6/petD (Cytochrom_B_C)Cytochrome b(C-terminal)/b6/petD- Domain
C,
M [auth N]
PF00033Cytochrome b/b6/petB (Cytochrome_B)Cytochrome b/b6/petB- Domain
C,
M [auth N]
PF00510Cytochrome c oxidase subunit III (COX3)Cytochrome c oxidase subunit III- Family
D,
N [auth O]
PF02936Cytochrome c oxidase subunit IV (COX4)Cytochrome c oxidase subunit IV- Family
D,
N [auth O]
PF02167Cytochrome C1 family (Cytochrom_C1)Cytochrome C1 family- Family
E,
O [auth P]
PF02921Ubiquinol cytochrome reductase transmembrane region (UCR_TM)Ubiquinol cytochrome reductase transmembrane region- Family
E,
O [auth P]
PF00355Rieske [2Fe-2S] domain (Rieske)Rieske [2Fe-2S] domainThe rieske domain has a [2Fe-2S] centre. Two conserved cysteines coordinate one Fe ion, while the other Fe ion is coordinated by two conserved histidines. In hyperthermophilic archaea there is a SKTPCX(2-3)C motif at the C-terminus. The cysteines in ...The rieske domain has a [2Fe-2S] centre. Two conserved cysteines coordinate one Fe ion, while the other Fe ion is coordinated by two conserved histidines. In hyperthermophilic archaea there is a SKTPCX(2-3)C motif at the C-terminus. The cysteines in this motif form a disulphide bridge, which stabilises the protein [4].
Domain
G,
Q [auth R]
PF02939UcrQ family (UcrQ)UcrQ family- Family
H,
R [auth S]
PF02320Ubiquinol-cytochrome C reductase hinge protein (UCR_hinge)Ubiquinol-cytochrome C reductase hinge protein- Family
H,
R [auth S]
PF02297Cytochrome oxidase c subunit VIb (COX6B)Cytochrome oxidase c subunit VIbCytochrome c oxidase, a 13 sub-unit complex, EC:1.9.3.1 is the terminal oxidase in the mitochondrial electron transport chain. This family is composed of the potentially heme-binding subunit IVb of the oxidase.Domain
I [auth J],
S [auth U]
PF05365Ubiquinol-cytochrome C reductase, UQCRX/QCR9 like (UCR_UQCRX_QCR9)Ubiquinol-cytochrome C reductase, UQCRX/QCR9 like- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A,
K [auth L]
Cytochrome b-c1 complex subunit 1, mitochondrial
J [auth K],
T [auth V]
Cytochrome b-c1 complex subunit 10-
U [auth T]Cytochrome b-c1 complex subunit 9
V [auth I]Cox7a2l protein-
W [auth a]Cytochrome c oxidase subunit 1
X [auth b]Cytochrome c oxidase subunit 2
Y [auth c]Cytochrome c oxidase subunit 3
Z [auth d]Cytochrome c oxidase subunit 4 isoform 1, mitochondrial-
AA [auth e]Cytochrome c oxidase subunit 5A, mitochondrial
BA [auth f]Cytochrome c oxidase subunit 5B, mitochondrial
CA [auth g]Cytochrome c oxidase subunit 6A2, mitochondrial
B,
L [auth M]
Cytochrome b-c1 complex subunit 2, mitochondrial
DA [auth h]Cytochrome c oxidase subunit 6B1-
EA [auth i]Cytochrome c oxidase subunit 6C-
FA [auth k]Cytochrome c oxidase subunit 7B, mitochondrial-
GA [auth l]Cytochrome c oxidase subunit 7C, mitochondrial-
HA [auth m]Cytochrome c oxidase subunit 8B, mitochondrial-
C,
M [auth N]
Cytochrome b
D,
N [auth O]
Cytochrome c1, heme protein, mitochondrial
E,
O [auth P]
Cytochrome b-c1 complex subunit Rieske, mitochondrial
F,
P [auth Q]
Cytochrome b-c1 complex subunit 7-
G,
Q [auth R]
Cytochrome b-c1 complex subunit 8-
H,
R [auth S]
Cytochrome b-c1 complex subunit 6, mitochondrial
I [auth J],
S [auth U]
Cytochrome b-c1 complex subunit 9-

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A,
K [auth L]
IPR007863Peptidase M16, C-terminalDomain
A,
K [auth L]
IPR011249Metalloenzyme, LuxS/M16 peptidase-likeHomologous Superfamily
A,
K [auth L]
IPR050361Mitochondrial Processing Peptidase/Ubiquinol-cytochrome c Reductase ComplexFamily
A,
K [auth L]
IPR011765Peptidase M16, N-terminalDomain
J [auth K],
T [auth V]
IPR029027Single alpha-helix domain superfamilyHomologous Superfamily
J [auth K],
T [auth V]
IPR015089Cytochrome b-c1 complex subunit 10Family
U [auth T]IPR036922Rieske [2Fe-2S] iron-sulphur domain superfamilyHomologous Superfamily
U [auth T]IPR014349Rieske iron-sulphur proteinFamily
U [auth T]IPR011070Globular protein, non-globular alpha/beta subunitHomologous Superfamily
U [auth T]IPR004192Cytochrome b-c1 complex subunit Rieske, transmembrane domainDomain
U [auth T]IPR015248Ubiquinol-cytochrome c reductase iron-sulphur subunit, N-terminalDomain
U [auth T]IPR017941Rieske [2Fe-2S] iron-sulphur domainDomain
U [auth T]IPR005805Rieske iron-sulphur protein, C-terminalDomain
U [auth T]IPR037008Cytochrome bc1 complex subunit Rieske, transmembrane domain superfamilyHomologous Superfamily
U [auth T]IPR006317Ubiquinol-cytochrome c reductase, iron-sulphur subunitDomain
V [auth I]IPR003177Cytochrome c oxidase subunit VIIa, metazoaFamily
V [auth I]IPR017267Cytochrome c oxidase subunit VIIa-related, mitochondrialFamily
V [auth I]IPR036539Cytochrome c oxidase, subunit VIIa superfamilyHomologous Superfamily
V [auth I]IPR039297Cytochrome c oxidase subunit VIIFamily
W [auth a]IPR036927Cytochrome c oxidase-like, subunit I superfamilyHomologous Superfamily
W [auth a]IPR000883Cytochrome c oxidase subunit IFamily
W [auth a]IPR023615Cytochrome c oxidase, subunit I, copper-binding siteBinding Site
W [auth a]IPR023616Cytochrome c oxidase-like, subunit I domainDomain
W [auth a]IPR033944Cytochrome c oxidase subunit I domainDomain
X [auth b]IPR011759Cytochrome C oxidase subunit II, transmembrane domainDomain
X [auth b]IPR036257Cytochrome C oxidase subunit II, transmembrane domain superfamilyHomologous Superfamily
X [auth b]IPR034210Cytochrome c oxidase subunit 2, C-terminalDomain
X [auth b]IPR045187Cytochrome c/quinol oxidase subunit IIFamily
X [auth b]IPR002429Cytochrome c oxidase subunit II-like C-terminalDomain
X [auth b]IPR008972CupredoxinHomologous Superfamily
X [auth b]IPR001505Copper centre Cu(A)Binding Site
X [auth b]IPR014222Cytochrome c oxidase, subunit IIDomain
Y [auth c]IPR035973Cytochrome c oxidase subunit III-like superfamilyHomologous Superfamily
Y [auth c]IPR013833Cytochrome c oxidase, subunit III, 4-helical bundleHomologous Superfamily
Y [auth c]IPR000298Cytochrome c oxidase subunit III-likeDomain
Y [auth c]IPR033945Cytochrome c oxidase subunit III domainDomain
Y [auth c]IPR024791Cytochrome c oxidase subunit IIIFamily
Z [auth d]IPR004203Cytochrome c oxidase subunit IV familyFamily
Z [auth d]IPR013288Cytochrome c oxidase subunit IVFamily
Z [auth d]IPR036639Cytochrome c oxidase subunit IV superfamilyHomologous Superfamily
AA [auth e]IPR003204Cytochrome c oxidase, subunit Va/VIFamily
AA [auth e]IPR036545Cytochrome c oxidase, subunit Va/VI superfamilyHomologous Superfamily
BA [auth f]IPR002124Cytochrome c oxidase, subunit VbFamily
BA [auth f]IPR036972Cytochrome c oxidase, subunit Vb superfamilyHomologous Superfamily
CA [auth g]IPR018507Cytochrome c oxidase, subunit VIa, conserved siteConserved Site
CA [auth g]IPR036418Cytochrome c oxidase, subunit VIa superfamilyHomologous Superfamily
CA [auth g]IPR001349Cytochrome c oxidase, subunit VIaFamily
B,
L [auth M]
IPR007863Peptidase M16, C-terminalDomain
B,
L [auth M]
IPR011249Metalloenzyme, LuxS/M16 peptidase-likeHomologous Superfamily
B,
L [auth M]
IPR050361Mitochondrial Processing Peptidase/Ubiquinol-cytochrome c Reductase ComplexFamily
B,
L [auth M]
IPR011765Peptidase M16, N-terminalDomain
B,
L [auth M]
IPR001431Peptidase M16, zinc-binding siteBinding Site
DA [auth h]IPR036549Cytochrome c oxidase subunit 6B/Cytochrome c oxidase assembly factor 6-like superfamilyHomologous Superfamily
DA [auth h]IPR048280Cytochrome oxidase c subunit VIb-likeFamily
DA [auth h]IPR003213Cytochrome c oxidase, subunit VIbFamily
EA [auth i]IPR037169Mitochondrial cytochrome c oxidase subunit VIc/VIIs superfamilyHomologous Superfamily
EA [auth i]IPR051389Cytochrome c oxidase subunit VIcFamily
EA [auth i]IPR034884Mitochondrial cytochrome c oxidase subunit VIc/VIIsFamily
FA [auth k]IPR023272Cytochrome C oxidase, subunit VIIB domain superfamilyHomologous Superfamily
FA [auth k]IPR008433Cytochrome C oxidase, subunit VIIBFamily
GA [auth l]IPR036636Cytochrome c oxidase subunit VIIc superfamilyHomologous Superfamily
GA [auth l]IPR004202Cytochrome c oxidase subunit VIIcFamily
HA [auth m]IPR003205Cytochrome c oxidase, subunit 8Family
HA [auth m]IPR036548Cytochrome c oxidase, subunit 8 superfamilyHomologous Superfamily
C,
M [auth N]
IPR036150Cytochrome b/b6, C-terminal domain superfamilyHomologous Superfamily
C,
M [auth N]
IPR048260Cytochrome b/b6, C-terminal domain, eukaryotic/bacterialDomain
C,
M [auth N]
IPR016174Di-haem cytochrome, transmembraneHomologous Superfamily
C,
M [auth N]
IPR005798Cytochrome b/b6, C-terminalDomain
C,
M [auth N]
IPR048259Cytochrome b/b6, N-terminal domain, eukaryotic/bacterialDomain
C,
M [auth N]
IPR005797Cytochrome b/b6, N-terminal domainDomain
C,
M [auth N]
IPR027387Cytochrome b/b6-like domain superfamilyHomologous Superfamily
C,
M [auth N]
IPR030689Cytochrome bFamily
D,
N [auth O]
IPR036909Cytochrome c-like domain superfamilyHomologous Superfamily
D,
N [auth O]
IPR002326Cytochrome c1Family
D,
N [auth O]
IPR009056Cytochrome c-like domainDomain
D,
N [auth O]
IPR021157Cytochrome c1, transmembrane anchor, C-terminalHomologous Superfamily
E,
O [auth P]
IPR036922Rieske [2Fe-2S] iron-sulphur domain superfamilyHomologous Superfamily
E,
O [auth P]
IPR014349Rieske iron-sulphur proteinFamily
E,
O [auth P]
IPR011070Globular protein, non-globular alpha/beta subunitHomologous Superfamily
E,
O [auth P]
IPR004192Cytochrome b-c1 complex subunit Rieske, transmembrane domainDomain
E,
O [auth P]
IPR015248Ubiquinol-cytochrome c reductase iron-sulphur subunit, N-terminalDomain
E,
O [auth P]
IPR017941Rieske [2Fe-2S] iron-sulphur domainDomain
E,
O [auth P]
IPR005805Rieske iron-sulphur protein, C-terminalDomain
E,
O [auth P]
IPR037008Cytochrome bc1 complex subunit Rieske, transmembrane domain superfamilyHomologous Superfamily
E,
O [auth P]
IPR006317Ubiquinol-cytochrome c reductase, iron-sulphur subunitDomain
F,
P [auth Q]
IPR003197Cytochrome b-c1 complex subunit 7Family
F,
P [auth Q]
IPR036544Cytochrome b-c1 complex subunit 7 superfamilyHomologous Superfamily
G,
Q [auth R]
IPR004205Cytochrome b-c1 complex subunit 8Family
G,
Q [auth R]
IPR036642Cytochrome b-c1 complex subunit 8 superfamilyHomologous Superfamily
H,
R [auth S]
IPR003422Cytochrome b-c1 complex, subunit 6Family
H,
R [auth S]
IPR023184Ubiquinol-cytochrome C reductase hinge domainDomain
H,
R [auth S]
IPR036811Ubiquinol-cytochrome C reductase hinge domain superfamilyHomologous Superfamily
I [auth J],
S [auth U]
IPR008027Cytochrome b-c1 complex subunit 9Family
I [auth J],
S [auth U]
IPR036656Cytochrome b-c1 complex subunit 9 superfamilyHomologous Superfamily