7NZ4
Cryo-EM structure of the MukBEF dimer
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
E [auth C1] | KicB | e7nz4C12 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: KicB | ECOD (1.6) |
E [auth C1] | MukF_C | e7nz4C13 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: MukF_C | ECOD (1.6) |
E [auth C1] | MukF_M | e7nz4C11 | A: alpha bundles | X: STAT-like | H: MukF C-terminal domain-like (From Topology) | T: MukF C-terminal domain-like | F: MukF_M | ECOD (1.6) |
F [auth D1] | KicB | e7nz4D12 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: KicB | ECOD (1.6) |
F [auth D1] | MukF_C | e7nz4D13 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: MukF_C | ECOD (1.6) |
F [auth D1] | MukF_M | e7nz4D11 | A: alpha bundles | X: STAT-like | H: MukF C-terminal domain-like (From Topology) | T: MukF C-terminal domain-like | F: MukF_M | ECOD (1.6) |
H [auth E2] | MukE_C | e7nz4E21 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: MukE_C | ECOD (1.6) |
H [auth E2] | MukE_N | e7nz4E22 | A: a+b two layers | X: Chromosome partition protein mukE N-terminal domain (From Topology) | H: Chromosome partition protein mukE N-terminal domain (From Topology) | T: Chromosome partition protein mukE N-terminal domain | F: MukE_N | ECOD (1.6) |
G [auth E1] | MukE_C | e7nz4E12 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: MukE_C | ECOD (1.6) |
G [auth E1] | MukE_N | e7nz4E11 | A: a+b two layers | X: Chromosome partition protein mukE N-terminal domain (From Topology) | H: Chromosome partition protein mukE N-terminal domain (From Topology) | T: Chromosome partition protein mukE N-terminal domain | F: MukE_N | ECOD (1.6) |
I [auth F1] | MukE_C | e7nz4F12 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: MukE_C | ECOD (1.6) |
I [auth F1] | MukE_N | e7nz4F11 | A: a+b two layers | X: Chromosome partition protein mukE N-terminal domain (From Topology) | H: Chromosome partition protein mukE N-terminal domain (From Topology) | T: Chromosome partition protein mukE N-terminal domain | F: MukE_N | ECOD (1.6) |
J [auth F2] | MukE_C | e7nz4F22 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: MukE_C | ECOD (1.6) |
J [auth F2] | MukE_N | e7nz4F21 | A: a+b two layers | X: Chromosome partition protein mukE N-terminal domain (From Topology) | H: Chromosome partition protein mukE N-terminal domain (From Topology) | T: Chromosome partition protein mukE N-terminal domain | F: MukE_N | ECOD (1.6) |
N [auth H2] | PP-binding | e7nz4H21 | A: alpha bundles | X: ACP-like | H: Acyl-carrier protein (ACP) (From Topology) | T: Acyl-carrier protein (ACP) | F: PP-binding | ECOD (1.6) |
K [auth G1] | PP-binding | e7nz4G11 | A: alpha bundles | X: ACP-like | H: Acyl-carrier protein (ACP) (From Topology) | T: Acyl-carrier protein (ACP) | F: PP-binding | ECOD (1.6) |
L [auth G2] | PP-binding | e7nz4G21 | A: alpha bundles | X: ACP-like | H: Acyl-carrier protein (ACP) (From Topology) | T: Acyl-carrier protein (ACP) | F: PP-binding | ECOD (1.6) |
M [auth H1] | PP-binding | e7nz4H11 | A: alpha bundles | X: ACP-like | H: Acyl-carrier protein (ACP) (From Topology) | T: Acyl-carrier protein (ACP) | F: PP-binding | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth A1], B [auth A2], C [auth B1], D [auth B2] | PF13558 | SbcC/RAD50-like, Walker B motif (SbcC_Walker_B) | SbcC/RAD50-like, Walker B motif | This entry represents the Walker B domain of RAD50 from eukaryotes and the prokaryotic homologue SbcCD complex subunit C. RAD50-ATPase forms a complex with Mre11-nuclease that detects and processes diverse and obstructed DNA ends. This domain is sepa ... | Domain |
A [auth A1], B [auth A2], C [auth B1], D [auth B2] | PF16330 | MukB hinge domain (MukB_hinge) | MukB hinge domain | The hinge domain of chromosome partition protein MukB is responsible for dimerisation and is also involved in protein-DNA interactions and conformational flexibility [1]. | Domain |
A [auth A1], B [auth A2], C [auth B1], D [auth B2] | PF04310 | MukB N-terminal (MukB) | MukB N-terminal | This family represents the N-terminal region of MukB, one of a group of bacterial proteins essential for the movement of nucleoids from mid-cell towards the cell quarters (i.e. chromosome partitioning). The structure of the N-terminal domain consist ... | Domain |
E [auth C1], F [auth D1] | PF17193 | MukF C-terminal domain (MukF_C) | MukF C-terminal domain | This presumed domain is found at the C-terminus of the MukF protein. | Domain |
E [auth C1], F [auth D1] | PF17192 | MukF middle domain (MukF_M) | MukF middle domain | The kicA and kicB genes are found upstream of mukB. It has been suggested that the kicB gene encodes a killing factor and the kicA gene codes for a protein that suppresses the killing function of the kicB gene product [1]. It was also demonstrated th ... | Domain |
G [auth E1], H [auth E2], I [auth F1], J [auth F2] | PF04288 | MukE-like family (MukE) | MukE-like family | - | Family |