7NWH

Mammalian pre-termination 80S ribosome with eRF1 and eRF3 bound by Blasticidin S.


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
L [auth f]SCOP2B SuperfamilyTranslational proteins8093714 3000811 SCOP2B (2021-05-27)
M [auth FF]SCOP2B SuperfamilyRibosomal protein S78066001 3000799 SCOP2B (2021-05-27)
B [auth C]SCOP2B SuperfamilyRibosomal protein L48052829 3001146 SCOP2B (2021-05-27)
B [auth C]SCOP2B Superfamily60S ribosomal protein L4 C-terminal domain-like8052828 3002143 SCOP2B (2021-05-27)
CA [auth I]SCOP2B SuperfamilyRibosomal protein L16p/L10e8097320 3000884 SCOP2B (2021-05-27)
GA [auth J]SCOP2B SuperfamilyRL5-like8073894 3001709 SCOP2B (2021-05-27)
KA [auth l]SCOP2B SuperfamilyRibosomal protein L39e8095597 3001756 SCOP2B (2021-05-27)
OA [auth MM]SCOP2B SuperfamilyL30e-like8063980 3001739 SCOP2B (2021-05-27)
PA [auth N]SCOP2B SuperfamilyRibosomal proteins S24e L23 and L15e8082477 3000210 SCOP2B (2021-05-27)
UA [auth OO]SCOP2B SuperfamilyTranslational machinery components8097824 3000571 SCOP2B (2021-05-27)
GB [auth SS]SCOP2B SuperfamilyS13-like H2TH domain8101439 3000053 SCOP2B (2021-05-27)
MB [auth VV]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain)8099376 3000068 SCOP2B (2021-05-27)
QB [auth X]SCOP2B SuperfamilyRibosomal proteins S24e L23 and L15e8095966 3000210 SCOP2B (2021-05-27)
G [auth e]SCOP2B SuperfamilyRibosomal protein L32e8102088 3000982 SCOP2B (2021-05-27)
TB [auth Y]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8076754 3000334 SCOP2B (2021-05-27)
WB [auth Z]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8053047 3000334 SCOP2B (2021-05-27)
YB [auth ZZ]SCOP2B SuperfamilyWinged helix DNA-binding domain8090991 3000034 SCOP2B (2021-05-27)
ZB [auth a]SCOP2B SuperfamilyRibosomal proteins L15p and L18e8097818 3001045 SCOP2B (2021-05-27)
CC [auth B]SCOP2B SuperfamilyTranslational proteins8078357 3000811 SCOP2B (2021-05-27)
DC [auth c]SCOP2B SuperfamilyL30e-like8094953 3001739 SCOP2B (2021-05-27)
FC [auth cc]SCOP2B SuperfamilyNucleic acid-binding proteins8095265 3000135 SCOP2B (2021-05-27)
I [auth ee]SCOP2B SuperfamilyRibosomal protein S30e-like8053455 3002190 SCOP2B (2021-05-27)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF00181e7nwhA1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00181ECOD (1.6)
APF03947e7nwhA2 A: beta barrelsX: SH3H: SH3T: SH3F: PF03947ECOD (1.6)
J [auth b]PF01779e7nwhb1 A: extended segmentsX: RPL29 (From Topology)H: RPL29 (From Topology)T: RPL29F: PF01779ECOD (1.6)
K [auth E]PF01159,PF03868e7nwhE1 A: beta barrelsX: SH3H: SH3T: SH3F: PF01159,PF03868ECOD (1.6)
L [auth f]PF01247e7nwhf1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PF01247ECOD (1.6)
M [auth FF]PF00177e7nwhFF1 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: PF00177ECOD (1.6)
N [auth ff]PF01599e7nwhff1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01599ECOD (1.6)
O [auth F]PF00327,PF08079e7nwhF1 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: PF00327,PF08079ECOD (1.6)
P [auth g]PF01199e7nwhg1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: RPL34 (From Topology)T: RPL34F: PF01199ECOD (1.6)
Q [auth BB]PF01015e7nwhBB1 A: beta barrelsX: Ribosomal protein L25-likeH: 40S ribosomal protein S3A N-terminal domain (From Topology)T: 40S ribosomal protein S3A N-terminal domainF: PF01015ECOD (1.6)
Q [auth BB]PF01015e7nwhBB2 A: a+b two layersX: T-foldH: 40S ribosomal protein S3A C-terminal domain (From Topology)T: 40S ribosomal protein S3A C-terminal domainF: PF01015ECOD (1.6)
R [auth GG]PF01092e7nwhGG1 A: beta barrelsX: Ribosomal protein L25-likeH: Ribosomal protein L25-like (From Topology)T: Ribosomal protein L25-likeF: PF01092ECOD (1.6)
S [auth gg]PF00400e7nwhgg1 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 7-bladedF: PF00400ECOD (1.6)
B [auth C]PF00573e7nwhC2 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: PF00573ECOD (1.6)
B [auth C]PF14374e7nwhC1 A: extended segmentsX: C-terminal helical region in 60S ribosomal protein L4 (L4p) (From Topology)H: C-terminal helical region in 60S ribosomal protein L4 (L4p) (From Topology)T: C-terminal helical region in 60S ribosomal protein L4 (L4p)F: PF14374ECOD (1.6)
T [auth G]PF01248e7nwhG1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: PF01248ECOD (1.6)
U [auth h]PF00831e7nwhh1 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: PF00831ECOD (1.6)
V [auth HH]PF01251e7nwhHH1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: 40S ribosomal protein S7-A (From Topology)T: 40S ribosomal protein S7-AF: PF01251ECOD (1.6)
X [auth bb]PF01667e7nwhbb1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01667ECOD (1.6)
Y [auth H]PF00347e7nwhH1 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: PF00347ECOD (1.6)
Z [auth i]PF01158e7nwhi1 A: alpha arraysX: 60S ribosomal protein rpL36 (L36e) (From Topology)H: 60S ribosomal protein rpL36 (L36e) (From Topology)T: 60S ribosomal protein rpL36 (L36e)F: PF01158ECOD (1.6)
AA [auth II]PF01201e7nwhII1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: PF01201ECOD (1.6)
BA [auth ii]PF03465e7nwhii3 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: PF03465ECOD (1.6)
BA [auth ii]PF03463e7nwhii2 A: a+b three layersX: N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 (From Topology)H: N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 (From Topology)T: N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1F: PF03463ECOD (1.6)
BA [auth ii]PF03464e7nwhii1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF03464ECOD (1.6)
CA [auth I]PF00252e7nwhI1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: PF00252ECOD (1.6)
C [auth d]PF01198e7nwhd1 A: a+b two layersX: Ribosomal protein L31e-likeH: Ribosomal protein L31e/gp120 outer domain (From Topology)T: Ribosomal protein L31e/gp120 outer domainF: PF01198ECOD (1.6)
DA [auth j]PF01907e7nwhj1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01907ECOD (1.6)
EA [auth JJ]PF00163,PF01479e7nwhJJ1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: PF00163,PF01479ECOD (1.6)
FA [auth jj]PF03144e7nwhjj2 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PF03144ECOD (1.6)
FA [auth jj]PF22594e7nwhjj3 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Aminomethyltransferase beta-barrel domainF: PF22594ECOD (1.6)
FA [auth jj]PF00009e7nwhjj1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00009ECOD (1.6)
GA [auth J]PF00281,PF00673e7nwhJ1 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: PF00281,PF00673ECOD (1.6)
HA [auth k]PF01781e7nwhk1 A: a+b two layersX: SRP9/14-likeH: Signal recognition particle alu RNA binding heterodimer SRP9/14-related (From Topology)T: Signal recognition particle alu RNA binding heterodimer SRP9/14-relatedF: PF01781ECOD (1.6)
IA [auth KK]PF03501e7nwhKK1 A: alpha arraysX: HTHH: HTHT: wingedF: PF03501ECOD (1.6)
JA [auth L]PF01294e7nwhL1 A: extended segmentsX: RPL13 (From Topology)H: RPL13 (From Topology)T: RPL13F: PF01294ECOD (1.6)
KA [auth l]PF00832e7nwhl1 A: extended segmentsX: Ribosomal protein L39e (From Topology)H: Ribosomal protein L39e (From Topology)T: Ribosomal protein L39eF: PF00832ECOD (1.6)
LA [auth LL]PF00366,PF16205e7nwhLL1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00366,PF16205ECOD (1.6)
MA [auth M]PF00467,PF01929e7nwhM1 A: beta barrelsX: SH3H: SH3T: SH3F: PF00467,PF01929ECOD (1.6)
D [auth DD]PF00189e7nwhDD1 A: a+b two layersX: T-foldH: Ribosomal protein S3-C (From Topology)T: Ribosomal protein S3-CF: PF00189ECOD (1.6)
D [auth DD]PF07650e7nwhDD2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: PF07650ECOD (1.6)
NA [auth m]PF01020e7nwhm1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01020ECOD (1.6)
OA [auth MM]PF01248e7nwhMM1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: PF01248ECOD (1.6)
PA [auth N]PF00827e7nwhN1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: PF00827ECOD (1.6)
QA [auth n]PF05162e7nwhn1 A: extended segmentsX: Ribosomal protein L41-A (From Topology)H: Ribosomal protein L41-A (From Topology)T: Ribosomal protein L41-AF: PF05162ECOD (1.6)
RA [auth NN]PF08069e7nwhNN1 A: alpha arraysX: HTHH: 40S ribosomal protein S13 N-terminal domain (From Topology)T: 40S ribosomal protein S13 N-terminal domainF: PF08069ECOD (1.6)
RA [auth NN]PF00312e7nwhNN2 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: PF00312ECOD (1.6)
SA [auth O]PF00572e7nwhO1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: PF00572ECOD (1.6)
TA [auth o]PF00935e7nwho1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF00935ECOD (1.6)
UA [auth OO]PF00411e7nwhOO1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF00411ECOD (1.6)
VA [auth P]PF00237e7nwhP1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: PF00237ECOD (1.6)
WA [auth p]PF01780e7nwhp1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01780ECOD (1.6)
E [auth dd]PF00253e7nwhdd1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: PF00253ECOD (1.6)
XA [auth PP]PF00203e7nwhPP1 A: a+b two layersX: Ribosomal protein S19 (From Topology)H: Ribosomal protein S19 (From Topology)T: Ribosomal protein S19F: PF00203ECOD (1.6)
YA [auth Q]PF17135e7nwhQ1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: PF17135ECOD (1.6)
ZA [auth r]PF01778e7nwhr1 A: a+b two layersX: RPL28 (From Topology)H: RPL28 (From Topology)T: RPL28F: PF01778ECOD (1.6)
AB [auth QQ]PF00380e7nwhQQ1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: PF00380ECOD (1.6)
BB [auth R]PF01280e7nwhR2 A: alpha arraysX: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)H: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)T: Ribosomal protein L19 (L19e) N-terminal domainF: PF01280ECOD (1.6)
BB [auth R]PF01280e7nwhR1 A: alpha bundlesX: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)H: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)T: Ribosomal protein L19 (L19e) C-terminal domainF: PF01280ECOD (1.6)
CB [auth s]PF00466e7nwhs1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein L10-like (From Topology)T: Ribosomal protein L10-likeF: PF00466ECOD (1.6)
CB [auth s]PF17777e7nwhs2 A: a+b two layersX: Insertion domain in 60S ribosomal protein rpP0 (L10P) (From Topology)H: Insertion domain in 60S ribosomal protein rpP0 (L10P) (From Topology)T: Insertion domain in 60S ribosomal protein rpP0 (L10P)F: PF17777ECOD (1.6)
DB [auth RR]PF00833e7nwhRR1 A: alpha arraysX: HTHH: HTHT: FF domainF: PF00833ECOD (1.6)
EB [auth S]F_UNCLASSIFIEDe7nwhS1 A: a+b two layersX: GP2-likeH: RplX-like (From Topology)T: RplX-likeF: F_UNCLASSIFIEDECOD (1.6)
EB [auth S]PF01775e7nwhS2 A: a+b two layersX: GP2-likeH: RplX-like (From Topology)T: RplX-likeF: PF01775ECOD (1.6)
FB [auth t]PF00298e7nwht1 A: alpha arraysX: HTHH: HTHT: Ribosomal protein L11, C-terminal domainF: PF00298ECOD (1.6)
FB [auth t]PF03946e7nwht2 A: a+b two layersX: Ribosomal protein L11/L12e N-terminal domain-likeH: Ribosomal protein L11/L12e N-terminal domain (From Topology)T: Ribosomal protein L11/L12e N-terminal domainF: PF03946ECOD (1.6)
GB [auth SS]PF00416e7nwhSS1 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: PF00416ECOD (1.6)
F [auth D]PF14204,PF17144e7nwhD1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF14204,PF17144ECOD (1.6)
HB [auth T]PF01157e7nwhT1 A: beta barrelsX: SH3H: SH3T: SH3F: PF01157ECOD (1.6)
IB [auth TT]PF01090e7nwhTT1 A: alpha arraysX: HTHH: HTHT: wingedF: PF01090ECOD (1.6)
JB [auth U]PF01776e7nwhU1 A: a+b two layersX: Ribosomal protein L22e (From Topology)H: Ribosomal protein L22e (From Topology)T: Ribosomal protein L22eF: PF01776ECOD (1.6)
KB [auth UU]PF00338e7nwhUU1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: PF00338ECOD (1.6)
LB [auth V]PF00238e7nwhV1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: PF00238ECOD (1.6)
MB [auth VV]PF01249e7nwhVV1 A: a+b two layersX: 40S ribosomal protein rpS21 (S21e) (From Topology)H: 40S ribosomal protein rpS21 (S21e) (From Topology)T: 40S ribosomal protein rpS21 (S21e)F: PF01249ECOD (1.6)
NB [auth W]PF01246e7nwhW1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: PF01246ECOD (1.6)
PB [auth WW]PF00410e7nwhWW2 A: a+b two layersX: R3H domain-likeH: Ribosomal protein S8, N-terminal domain (From Topology)T: Ribosomal protein S8, N-terminal domainF: PF00410ECOD (1.6)
PB [auth WW]PF00410e7nwhWW1 A: a+b two layersX: Ribosomal protein S8, C-terminal domain (From Topology)H: Ribosomal protein S8, C-terminal domain (From Topology)T: Ribosomal protein S8, C-terminal domainF: PF00410ECOD (1.6)
QB [auth X]PF00276,PF03939e7nwhX1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: PF00276,PF03939ECOD (1.6)
G [auth e]PF01655e7nwhe1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L32e (From Topology)T: Ribosomal protein L32eF: PF01655ECOD (1.6)
SB [auth XX]PF00164e7nwhXX1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00164ECOD (1.6)
TB [auth Y]PF16906e7nwhY1 A: beta barrelsX: SH3H: SH3T: SH3F: PF16906ECOD (1.6)
VB [auth YY]PF01282e7nwhYY1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: PF01282ECOD (1.6)
WB [auth Z]PF00467,PF01777e7nwhZ1 A: beta barrelsX: SH3H: SH3T: SH3F: PF00467,PF01777ECOD (1.6)
YB [auth ZZ]PF03297e7nwhZZ1 A: alpha arraysX: HTHH: HTHT: wingedF: PF03297ECOD (1.6)
ZB [auth a]PF00828e7nwha1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: PF00828ECOD (1.6)
AC [auth AA]PF00318e7nwhAA1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: PF00318ECOD (1.6)
H [auth EE]PF00900e7nwhEE1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00900ECOD (1.6)
H [auth EE]PF00467,PF16121e7nwhEE2 A: beta barrelsX: SH3H: SH3T: SH3F: PF00467,PF16121ECOD (1.6)
H [auth EE]PF00900,PF01479,PF08071e7nwhEE3 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: PF00900,PF01479,PF08071ECOD (1.6)
BC [auth aa]PF01283e7nwhaa1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: PF01283ECOD (1.6)
CC [auth B]PF00297e7nwhB1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PF00297ECOD (1.6)
DC [auth c]PF01248e7nwhc1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: PF01248ECOD (1.6)
EC [auth CC]PF03719e7nwhCC3 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: PF03719ECOD (1.6)
EC [auth CC]PF00333e7nwhCC1 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: PF00333ECOD (1.6)
EC [auth CC]PF00333e7nwhCC2 A: extended segmentsX: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)H: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)T: N-terminal region in 40S ribosomal protein rpS2 (S5p)F: PF00333ECOD (1.6)
FC [auth cc]PF01200e7nwhcc1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF01200ECOD (1.6)
I [auth ee]PF04758e7nwhee1 A: extended segmentsX: 40S ribosomal protein S30 (S30e) (From Topology)H: 40S ribosomal protein S30 (S30e) (From Topology)T: 40S ribosomal protein S30 (S30e)F: PF04758ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domain- Domain
PF00181Ribosomal Proteins L2, RNA binding domain (Ribosomal_L2)Ribosomal Proteins L2, RNA binding domain- Domain
PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A- Family
K [auth E]PF01655Ribosomal protein L32 (Ribosomal_L32e)Ribosomal protein L32- Family
K [auth E]PF01159Ribosomal protein L6e (Ribosomal_L6e)Ribosomal protein L6e- Family
M [auth FF]PF00177Ribosomal protein S7p/S5e (Ribosomal_S7)Ribosomal protein S7p/S5eThis family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes.Domain
M [auth FF]PF01599Ribosomal protein S27a (Ribosomal_S27)Ribosomal protein S27aThis family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins ...This family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins as extensions of ubiquitin promotes their incorporation into nascent ribosomes by a transient metabolic stabilisation and is required for efficient ribosome biogenesis [3]. The ribosomal extension protein S27a contains a basic region that is proposed to form a zinc finger; its fusion gene is proposed as a mechanism to maintain a fixed ratio between ubiquitin necessary for degrading proteins and ribosomes a source of proteins [2].
Domain
O [auth F]PF08079Ribosomal L30 N-terminal domain (Ribosomal_L30_N)Ribosomal L30 N-terminal domainThis presumed domain is found at the N-terminus of Ribosomal L30 proteins and has been termed RL30NT or NUC018 [1].Domain
O [auth F]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7.Domain
O [auth F]PF01247Ribosomal protein L35Ae (Ribosomal_L35Ae)Ribosomal protein L35Ae- Domain
R [auth GG]PF00400WD domain, G-beta repeat (WD40)WD domain, G-beta repeat- Repeat
B [auth C]PF1437460S ribosomal protein L4 C-terminal domain (Ribos_L4_asso_C)60S ribosomal protein L4 C-terminal domainThis family is found at the very C-terminal of 60 ribosomal L4 proteins.Domain
B [auth C]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
B [auth C]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
Y [auth H]PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6- Domain
Y [auth H]PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
AA [auth II]PF03463eRF1 domain 1 (eRF1_1)eRF1 domain 1The release factor eRF1 terminates protein biosynthesis by recognising stop codons at the A site of the ribosome and stimulating peptidyl-tRNA bond hydrolysis at the peptidyl transferase centre. The crystal structure of human eRF1 is known [1]. The o ...The release factor eRF1 terminates protein biosynthesis by recognising stop codons at the A site of the ribosome and stimulating peptidyl-tRNA bond hydrolysis at the peptidyl transferase centre. The crystal structure of human eRF1 is known [1]. The overall shape and dimensions of eRF1 resemble a tRNA molecule with domains 1, 2, and 3 of eRF1 corresponding to the anticodon loop, aminoacyl acceptor stem, and T stem of a tRNA molecule, respectively. The position of the essential GGQ motif at an exposed tip of domain 2 suggests that the Gln residue coordinates a water molecule to mediate the hydrolytic activity at the peptidyl transferase centre. A conserved groove on domain 1, 80 A from the GGQ motif, is proposed to form the codon recognition site [1]. This family also includes other proteins for which the precise molecular function is unknown. Many of them are from Archaebacteria. These proteins may also be involved in translation termination but this awaits experimental verification.
Domain
AA [auth II]PF03464eRF1 domain 2 (eRF1_2)eRF1 domain 2The release factor eRF1 terminates protein biosynthesis by recognising stop codons at the A site of the ribosome and stimulating peptidyl-tRNA bond hydrolysis at the peptidyl transferase centre. The crystal structure of human eRF1 is known [1]. The o ...The release factor eRF1 terminates protein biosynthesis by recognising stop codons at the A site of the ribosome and stimulating peptidyl-tRNA bond hydrolysis at the peptidyl transferase centre. The crystal structure of human eRF1 is known [1]. The overall shape and dimensions of eRF1 resemble a tRNA molecule with domains 1, 2, and 3 of eRF1 corresponding to the anticodon loop, aminoacyl acceptor stem, and T stem of a tRNA molecule, respectively. The position of the essential GGQ motif at an exposed tip of domain 2 suggests that the Gln residue coordinates a water molecule to mediate the hydrolytic activity at the peptidyl transferase centre. A conserved groove on domain 1, 80 A from the GGQ motif, is proposed to form the codon recognition site [1]. This family also includes other proteins for which the precise molecular function is unknown. Many of them are from Archaebacteria. These proteins may also be involved in translation termination but this awaits experimental verification.
Domain
CA [auth I]PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10e- Domain
EA [auth JJ]PF00163Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)Ribosomal protein S4/S9 N-terminal domain- Family
EA [auth JJ]PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
GA [auth J]PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5- Domain
GA [auth J]PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281.Domain
IA [auth KK]PF03501Plectin/S10 domain (S10_plectin)Plectin/S10 domainThis presumed domain is found at the N-terminus of some isoforms of the cytoskeletal muscle protein plectin as well as the ribosomal S10 protein. This domain may be involved in RNA binding.Domain
JA [auth L]PF00832Ribosomal L39 protein (Ribosomal_L39)Ribosomal L39 protein- Family
MA [auth M]PF01929Ribosomal protein L14 (Ribosomal_L14e)Ribosomal protein L14- Family
D [auth DD]PF07650KH domain (KH_2)KH domain- Domain
D [auth DD]PF00189Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)Ribosomal protein S3, C-terminal domainThis family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer.Domain
OA [auth MM]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
PA [auth N]PF05162Ribosomal protein L41 (Ribosomal_L41)Ribosomal protein L41- Family
PA [auth N]PF00827Ribosomal L15 (Ribosomal_L15e)Ribosomal L15- Family
UA [auth OO]PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
XA [auth PP]PF00203Ribosomal protein S19 (Ribosomal_S19)Ribosomal protein S19- Domain
BB [auth R]PF01778Ribosomal L28e protein family (Ribosomal_L28e)Ribosomal L28e protein family- Family
BB [auth R]PF01280Ribosomal protein L19e (Ribosomal_L19e)Ribosomal protein L19e- Family
EB [auth S]PF17777Insertion domain in 60S ribosomal protein L10P (RL10P_insert)Insertion domain in 60S ribosomal protein L10PThis domain is found in prokaryotic and archaeal ribosomal L10 protein [1].Domain
EB [auth S]PF00466Ribosomal protein L10 (Ribosomal_L10)Ribosomal protein L10- Family
EB [auth S]PF01775Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A (Ribosomal_L18A)Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18AThis family includes: archaeal 50S ribosomal protein L18Ae, often referred to as L20e or LX; fungal 60S ribosomal protein L20; and higher eukaryote 60S ribosomal protein L18A.Domain
GB [auth SS]PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
MB [auth VV]PF01249Ribosomal protein S21e (Ribosomal_S21e)Ribosomal protein S21e- Family
NB [auth W]PF01246Ribosomal protein L24e (Ribosomal_L24e)Ribosomal protein L24e- Domain
QB [auth X]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
SB [auth XX]PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23- Family
TB [auth Y]PF16906Ribosomal proteins L26 eukaryotic, L24P archaeal (Ribosomal_L26)Ribosomal proteins L26 eukaryotic, L24P archaeal- Family
TB [auth Y]PF00467KOW motif (KOW)KOW motif- Family
WB [auth Z]PF01777Ribosomal L27e protein family (Ribosomal_L27e)Ribosomal L27e protein family- Family
WB [auth Z]PF00467KOW motif (KOW)KOW motif- Family
CC [auth B]PF01779Ribosomal L29e protein family (Ribosomal_L29e)Ribosomal L29e protein family- Family
CC [auth B]PF00297Ribosomal protein L3 (Ribosomal_L3)Ribosomal protein L3- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
60S ribosomal protein L8
J [auth b]eL29
K [auth E]60S ribosomal protein L6
L [auth f]eL33
M [auth FF]Ribosomal protein S5
N [auth ff]40S ribosomal protein S27a
O [auth F]uL30
P [auth g]60S ribosomal protein L34
Q [auth BB]40S ribosomal protein S3a---
R [auth GG]40S ribosomal protein S6---
S [auth gg]Epididymis tissue sperm binding protein Li 3a
B [auth C]uL4
T [auth G]L7a---
U [auth h]uL29
V [auth HH]S7---
W [auth hh]mRNA---
X [auth bb]40S ribosomal protein S27---
Y [auth H]L9
Z [auth i]60S ribosomal protein L36---
AA [auth II]40S ribosomal protein S8---
BA [auth ii]Eukaryotic peptide chain release factor subunit 1
CA [auth I]60S ribosomal protein L10
C [auth d]eL31---
DA [auth j]Ribosomal protein L37
EA [auth JJ]40S ribosomal protein S9
FA [auth jj]eRF3a---
GA [auth J]60S ribosomal protein L11
HA [auth k]L38---
IA [auth KK]40S ribosomal protein S10 -
JA [auth L]60S ribosomal protein L13---
KA [auth l]eL39
LA [auth LL]40S ribosomal protein S11---
MA [auth M]Ribosomal protein L14
D [auth DD]40S ribosomal protein S3
NA [auth m]60S RIBOSOMAL PROTEIN EL40---
OA [auth MM]40S ribosomal protein S12
PA [auth N]Ribosomal protein L15
QA [auth n]60s ribosomal protein l41
RA [auth NN]ribosomal protein uS15---
SA [auth O]60S RIBOSOMAL PROTEIN UL13---
TA [auth o]eL42---
UA [auth OO]uS11
VA [auth P]uL22---
WA [auth p]ribosomal protein eL43---
E [auth dd]S29---
XA [auth PP]40S ribosomal protein uS19
YA [auth Q]eL18---
ZA [auth r]eL28
AB [auth QQ]Ribosomal protein S16---
BB [auth R]60S ribosomal protein L19
CB [auth s]60S acidic ribosomal protein P0
DB [auth RR]40S ribosomal protein S17
EB [auth S]60S ribosomal protein L18a
FB [auth t]uL12---
GB [auth SS]40S ribosomal protein uS13
F [auth D]60S ribosomal protein L5
HB [auth T]eL21
IB [auth TT]eS19---
JB [auth U]L22---
KB [auth UU]40S ribosomal protein S20---
LB [auth V]eL14---
MB [auth VV]40S ribosomal protein S21
NB [auth W]60S ribosomal protein L24-like protein
OB [auth 5]28S Ribosomal RNA---
PB [auth WW]Ribosomal protein S15a---
QB [auth X]uL23
G [auth e]Ribosomal protein L32
RB [auth 7]5S Ribosomal RNA---
SB [auth XX]40S ribosomal protein uS12
TB [auth Y]Ribosomal protein L26
UB [auth 8]5.8S Ribosomal RNA---
VB [auth YY]40S ribosomal protein S24---
WB [auth Z]60S ribosomal protein L27
XB [auth 9]18S Ribosomal RNA---
YB [auth ZZ]40S ribosomal protein S25
ZB [auth a]60S ribosomal protein L27a
AC [auth AA]40S_SA_C domain-containing protein---
H [auth EE]40S ribosomal protein S4---
BC [auth aa]40S ribosomal protein S26
CC [auth B]uL3
DC [auth c]eL30
EC [auth CC]40S ribosomal protein S2---
FC [auth cc]40S ribosomal protein S28
I [auth ee]40S ribosomal protein S30

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
IPR023672Large ribosomal subunit protein uL2, archaeal-typeFamily
IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
IPR002171Large ribosomal subunit protein uL2Family
J [auth b]IPR002673Large ribosomal subunit protein eL29Family
K [auth E]IPR005568Large ribosomal subunit protein uL6, N-terminalDomain
K [auth E]IPR049633Large ribosomal subunit protein eL6, conserved siteConserved Site
K [auth E]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
K [auth E]IPR041997Large ribosomal subunit protein eL6, KOW domainDomain
K [auth E]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
K [auth E]IPR000915Large ribosomal subunit protein eL6Family
L [auth f]IPR038661Large ribosomal subunit protein eL33 superfamilyHomologous Superfamily
L [auth f]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
L [auth f]IPR001780Large ribosomal subunit protein eL33Family
L [auth f]IPR018266Large ribosomal subunit protein eL33, conserved siteConserved Site
M [auth FF]IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
M [auth FF]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
M [auth FF]IPR000235Small ribosomal subunit protein uS7Family
M [auth FF]IPR023798Small ribosomal subunit protein uS7 domainDomain
M [auth FF]IPR005716Ribosomal protein uS7, eukaryotic/archaealFamily
N [auth ff]IPR019954Ubiquitin conserved siteConserved Site
N [auth ff]IPR000626Ubiquitin-like domainDomain
N [auth ff]IPR038582Small ribosomal subunit protein eS31 eukaryotic-type superfamilyHomologous Superfamily
N [auth ff]IPR002906Small ribosomal subunit protein eS31Domain
N [auth ff]IPR019956Ubiquitin domainDomain
N [auth ff]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
N [auth ff]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
O [auth F]IPR035808Large ribosomal subunit protein uL30, eukaryotic/archaealDomain
O [auth F]IPR012988Large ribosomal subunit protein uL30, N-terminal, eukaryotesDomain
O [auth F]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
O [auth F]IPR039699Large ribosomal subunit protein uL30Family
O [auth F]IPR005998Large ribosomal subunit protein uL30, eukaryoticFamily
O [auth F]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
O [auth F]IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
P [auth g]IPR008195Large ribosomal subunit protein eL34Family
P [auth g]IPR018065Large ribosomal subunit protein eL34, conserved siteConserved Site
S [auth gg]IPR019775WD40 repeat, conserved siteConserved Site
S [auth gg]IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
S [auth gg]IPR045223Small ribosomal subunit protein RACK1-likeFamily
S [auth gg]IPR001680WD40 repeatRepeat
S [auth gg]IPR020472G-protein beta WD-40 repeatRepeat
S [auth gg]IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
B [auth C]IPR025755Large ribosomal subunit protein uL4, C-terminal domainDomain
B [auth C]IPR002136Large ribosomal subunit protein uL4Family
B [auth C]IPR013000Large ribosomal subunit protein uL4, eukaryotic/archaeal, conserved siteConserved Site
B [auth C]IPR045240Large ribosomal subunit protein uL4, eukaryotic and archaeal typeFamily
B [auth C]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
U [auth h]IPR045059Large ribosomal subunit protein uL29, eukaryotesFamily
U [auth h]IPR001854Large ribosomal subunit protein uL29Family
U [auth h]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
U [auth h]IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
Y [auth H]IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
Y [auth H]IPR002359Large ribosomal subunit protein uL6, conserved site-2Conserved Site
Y [auth H]IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
Y [auth H]IPR000702Large ribosomal subunit protein uL6-likeFamily
BA [auth ii]IPR004403Peptide chain release factor eRF1/aRF1Family
BA [auth ii]IPR005141eRF1 domain 2Domain
BA [auth ii]IPR005140eRF1 domain 1/Pelota-likeDomain
BA [auth ii]IPR042226eRF1, domain 2 superfamilyHomologous Superfamily
BA [auth ii]IPR024049eRF1, domain 1Homologous Superfamily
BA [auth ii]IPR005142eRF1 domain 3Domain
BA [auth ii]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
CA [auth I]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
CA [auth I]IPR001197Large ribosomal subunit protein uL16, eukaryotes/archaeaFamily
CA [auth I]IPR016180Large ribosomal subunit protein uL16 domainDomain
CA [auth I]IPR047873Large ribosomal subunit protein uL16Family
CA [auth I]IPR018255Large ribosomal subunit protein uL16, conserved site, eukaryotes/archaeaConserved Site
DA [auth j]IPR001569Large ribosomal subunit protein eL37Family
DA [auth j]IPR018267Large ribosomal subunit protein eL37, conserved siteConserved Site
DA [auth j]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
DA [auth j]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
EA [auth JJ]IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
EA [auth JJ]IPR002942RNA-binding S4 domainDomain
EA [auth JJ]IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
EA [auth JJ]IPR005710Small ribosomal subunit protein uS4, eukaryotic/archaealFamily
EA [auth JJ]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
EA [auth JJ]IPR022801Small ribosomal subunit protein uS4Family
GA [auth J]IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
GA [auth J]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
GA [auth J]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
GA [auth J]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
GA [auth J]IPR002132Large ribosomal subunit protein uL5Family
IA [auth KK]IPR037447Small ribosomal subunit protein eS10Family
IA [auth KK]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
IA [auth KK]IPR005326Plectin/eS10, N-terminalDomain
KA [auth l]IPR023626Large ribosomal subunit protein eL39 domain superfamilyHomologous Superfamily
KA [auth l]IPR000077Large ribosomal subunit protein eL39Family
KA [auth l]IPR020083Large ribosomal subunit protein eL39, conserved siteConserved Site
MA [auth M]IPR039660Large ribosomal subunit protein eL14Family
MA [auth M]IPR041985Large ribosomal subunit protein eL14, KOW motifDomain
MA [auth M]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
MA [auth M]IPR002784Large ribosomal subunit protein eL14 domainDomain
MA [auth M]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
D [auth DD]IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
D [auth DD]IPR004044K Homology domain, type 2Domain
D [auth DD]IPR015946K homology domain-like, alpha/betaHomologous Superfamily
D [auth DD]IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
D [auth DD]IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
D [auth DD]IPR005703Small ribosomal subunit protein uS3, eukaryotic/archaealFamily
D [auth DD]IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site
OA [auth MM]IPR000530Small ribosomal subunit protein eS12Family
OA [auth MM]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
OA [auth MM]IPR047860Small ribosomal subunit protein eS12, conserved siteConserved Site
OA [auth MM]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
PA [auth N]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
PA [auth N]IPR020925Large ribosomal subunit protein eL15, conserved siteConserved Site
PA [auth N]IPR024794Large ribosomal subunit protein eL15 core domain superfamilyHomologous Superfamily
PA [auth N]IPR000439Large ribosomal subunit protein eL15Family
QA [auth n]IPR007836Large ribosomal subunit protein eS32Family
UA [auth OO]IPR001971Small ribosomal subunit protein uS11Family
UA [auth OO]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
UA [auth OO]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
XA [auth PP]IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
XA [auth PP]IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
XA [auth PP]IPR005713Small ribosomal subunit protein uS19, eukaryotic/archaealFamily
XA [auth PP]IPR002222Small ribosomal subunit protein uS19Family
ZA [auth r]IPR029004Ribosomal eL28/Mak16Domain
ZA [auth r]IPR002672Large ribosomal subunit protein eL28Family
BB [auth R]IPR015972Large ribosomal subunit protein eL19, domain 1Homologous Superfamily
BB [auth R]IPR039547Large ribosomal subunit protein eL19Family
BB [auth R]IPR023638Large ribosomal subunit protein eL19, conserved siteConserved Site
BB [auth R]IPR035970Large ribosomal subunit protein eL19 superfamilyHomologous Superfamily
BB [auth R]IPR000196Large ribosomal subunit protein eL19 domainDomain
BB [auth R]IPR033935Large ribosomal subunit protein eL19, eukaryoticDomain
CB [auth s]IPR043141Large ribosomal subunit protein uL10-like domain superfamilyHomologous Superfamily
CB [auth s]IPR001790Large ribosomal subunit protein uL10Family
CB [auth s]IPR043164Large ribosomal subunit protein uL10-like, insertion domain superfamilyHomologous Superfamily
CB [auth s]IPR030670Large ribosomal subunit protein uL10, eukaryotesFamily
CB [auth s]IPR040637Large ribosomal subunit protein uL10-like, insertion domainDomain
DB [auth RR]IPR036401Small ribosomal subunit protein eS17 superfamilyHomologous Superfamily
DB [auth RR]IPR001210Small ribosomal subunit protein eS17Family
DB [auth RR]IPR018273Small ribosomal subunit protein eS17, conserved siteConserved Site
EB [auth S]IPR028877Large ribosomal subunit protein eL20Family
EB [auth S]IPR023573Large ribosomal subunit protein eL20 domainDomain
EB [auth S]IPR021138Large ribosomal subunit protein eL20, eukaryotesFamily
GB [auth SS]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
GB [auth SS]IPR001892Small ribosomal subunit protein uS13Family
GB [auth SS]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
GB [auth SS]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
F [auth D]IPR005485Large ribosomal subunit protein uL18 eukaryotic/archaealFamily
F [auth D]IPR025607Large ribosomal subunit protein uL18, C-terminal, eukaryotesDomain
HB [auth T]IPR018259Large ribosomal subunit protein eL21, conserved siteConserved Site
HB [auth T]IPR036948Large ribosomal subunit protein eL21 superfamilyHomologous Superfamily
HB [auth T]IPR001147Large ribosomal subunit protein eL21Family
HB [auth T]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
MB [auth VV]IPR038579Small ribosomal subunit protein eS21 superfamilyHomologous Superfamily
MB [auth VV]IPR018279Small ribosomal subunit protein eS21, conserved siteConserved Site
MB [auth VV]IPR001931Small ribosomal subunit protein eS21Family
NB [auth W]IPR011017TRASH domainDomain
NB [auth W]IPR000988Large ribosomal subunit protein eL24-relatedFamily
NB [auth W]IPR023442Large ribosomal subunit protein eL24, conserved siteConserved Site
NB [auth W]IPR038630Ribosomal protein L24e/L24 superfamilyHomologous Superfamily
QB [auth X]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
QB [auth X]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
QB [auth X]IPR005633Large ribosomal subunit protein uL23, N-terminalDomain
QB [auth X]IPR019985Large ribosomal subunit protein uL23Family
QB [auth X]IPR001014Large ribosomal subunit protein uL23, conserved siteConserved Site
QB [auth X]IPR013025Large ribosomal subunit protein uL23-likeFamily
G [auth e]IPR036351Large ribosomal subunit protein eL32 superfamilyHomologous Superfamily
G [auth e]IPR001515Large ribosomal subunit protein eL32Family
G [auth e]IPR018263Large ribosomal subunit protein eL32, conserved siteConserved Site
SB [auth XX]IPR006032Small ribosomal subunit protein uS12Family
SB [auth XX]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
SB [auth XX]IPR005680Small ribosomal subunit protein uS12, eukaryotic/archaealFamily
TB [auth Y]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
TB [auth Y]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
TB [auth Y]IPR005756Large ribosomal subunit protein uL24, eukaryotic/archaealFamily
TB [auth Y]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
TB [auth Y]IPR005824KOWDomain
TB [auth Y]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
WB [auth Z]IPR018262Large ribosomal subunit protein eL27, conserved siteConserved Site
WB [auth Z]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
WB [auth Z]IPR001141Large ribosomal subunit protein eL27Family
WB [auth Z]IPR038655Large ribosomal subunit protein eL27 superfamilyHomologous Superfamily
WB [auth Z]IPR005824KOWDomain
WB [auth Z]IPR041991Large ribosomal subunit protein eL27, KOW domainDomain
YB [auth ZZ]IPR004977Small ribosomal subunit protein eS25Family
YB [auth ZZ]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
ZB [auth a]IPR027386Ribosomal uL15, N-terminalHomologous Superfamily
ZB [auth a]IPR021131Large ribosomal subunit protein uL15/eL18Domain
ZB [auth a]IPR030878Large ribosomal subunit protein uL15Family
ZB [auth a]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
ZB [auth a]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
BC [auth aa]IPR038551Ribosomal protein eS26 superfamilyHomologous Superfamily
BC [auth aa]IPR000892Small ribosomal subunit protein eS26Family
BC [auth aa]IPR047864Ribosomal protein eS26, conserved siteConserved Site
CC [auth B]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
CC [auth B]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
CC [auth B]IPR045077Large ribosomal subunit protein uL3, archaeal/eukaryotic-typeFamily
CC [auth B]IPR044892Ribosomal protein L3, domain 3, archaeal-type superfamilyHomologous Superfamily
CC [auth B]IPR000597Large ribosomal subunit protein uL3Family
DC [auth c]IPR022991Large ribosomal subunit protein eL30, conserved siteConserved Site
DC [auth c]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
DC [auth c]IPR000231Large ribosomal subunit protein eL30Family
DC [auth c]IPR039109Large ribosomal subunit protein eL30-likeFamily
DC [auth c]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
FC [auth cc]IPR028626Ribosomal protein eS28 conserved siteConserved Site
FC [auth cc]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
FC [auth cc]IPR000289Small ribosomal subunit protein eS28Family
I [auth ee]IPR039415Ubiquitin-like protein FUBIDomain
I [auth ee]IPR019956Ubiquitin domainDomain
I [auth ee]IPR019954Ubiquitin conserved siteConserved Site
I [auth ee]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
I [auth ee]IPR000626Ubiquitin-like domainDomain
I [auth ee]IPR006846Small ribosomal subunit protein eS30Family