7NWG

Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
J [auth G2]SCOP2B SuperfamilyRibosomal protein S78066001 3000799 SCOP2B (2021-05-27)
M [auth J2]SCOP2B Superfamily50S Ribosomal protein L14-like8053075 3000433 SCOP2B (2021-05-27)
P [auth M2]SCOP2B SuperfamilyNucleic acid-binding proteins8052707 3000135 SCOP2B (2021-05-27)
P [auth M2]SCOP2B SuperfamilyRibosomal S17 N-terminal domain-like8052708 3002138 SCOP2B (2021-05-27)
Q [auth N2]SCOP2B SuperfamilyL30e-like8063980 3001739 SCOP2B (2021-05-27)
R [auth O2]SCOP2B SuperfamilyHomeodomain-like8052970 3000001 SCOP2B (2021-05-27)
R [auth O2]SCOP2B SuperfamilyS15/NS1 RNA-binding domain8052971 3001284 SCOP2B (2021-05-27)
S [auth P2]SCOP2B SuperfamilyTranslational machinery components8097824 3000571 SCOP2B (2021-05-27)
U [auth R2]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like8082683 3000100 SCOP2B (2021-05-27)
W [auth T2]SCOP2B SuperfamilyS13-like H2TH domain8101439 3000053 SCOP2B (2021-05-27)
X [auth U2]SCOP2B SuperfamilyWinged helix DNA-binding domain8089322 3000034 SCOP2B (2021-05-27)
Z [auth W2]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain)8099376 3000068 SCOP2B (2021-05-27)
GA [auth d2]SCOP2B SuperfamilyNucleic acid-binding proteins8095265 3000135 SCOP2B (2021-05-27)
HA [auth e2]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain)8052584 3000068 SCOP2B (2021-05-27)
IA [auth f2]SCOP2B SuperfamilyRibosomal protein S30e-like8053455 3002190 SCOP2B (2021-05-27)
MA [auth B3]SCOP2B SuperfamilyTranslational proteins8078357 3000811 SCOP2B (2021-05-27)
NA [auth C3]SCOP2B Superfamily60S ribosomal protein L4 C-terminal domain-like8052828 3002143 SCOP2B (2021-05-27)
NA [auth C3]SCOP2B SuperfamilyRibosomal protein L48052829 3001146 SCOP2B (2021-05-27)
TA [auth I3]SCOP2B SuperfamilyRibosomal protein L16p/L10e8097320 3000884 SCOP2B (2021-05-27)
UA [auth J3]SCOP2B SuperfamilyRL5-like8073894 3001709 SCOP2B (2021-05-27)
E [auth B2]SCOP2B SuperfamilySIS domain/Ribosomal protein S2-like8097826 3001397 SCOP2B (2021-05-27)
XA [auth N3]SCOP2B SuperfamilyRibosomal proteins S24e L23 and L15e8082477 3000210 SCOP2B (2021-05-27)
FB [auth V3]SCOP2B Superfamily50S Ribosomal protein L14-like8072048 3000433 SCOP2B (2021-05-27)
GB [auth X3]SCOP2B SuperfamilyRibosomal proteins S24e L23 and L15e8095966 3000210 SCOP2B (2021-05-27)
F [auth C2]SCOP2B SuperfamilyRibosomal S3Ae-like8053216 3002166 SCOP2B (2021-05-27)
HB [auth Y3]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8076754 3000334 SCOP2B (2021-05-27)
IB [auth Z3]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8053047 3000334 SCOP2B (2021-05-27)
LB [auth c3]SCOP2B SuperfamilyL30e-like8094953 3001739 SCOP2B (2021-05-27)
NB [auth e3]SCOP2B SuperfamilyRibosomal protein L32e8102088 3000982 SCOP2B (2021-05-27)
OB [auth f3]SCOP2B SuperfamilyTranslational proteins8093714 3000811 SCOP2B (2021-05-27)
UB [auth l3]SCOP2B SuperfamilyRibosomal protein L39e8095597 3001756 SCOP2B (2021-05-27)
FC [auth w3]SCOP2B SuperfamilyRibosomal protein L1p/L10e-like8065344 3001911 SCOP2B (2021-05-27)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
J [auth G2]PF00177e7nwgG21 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: PF00177ECOD (1.6)
K [auth H2]PF01092e7nwgH21 A: beta barrelsX: Ribosomal protein L25-likeH: Ribosomal protein L25-like (From Topology)T: Ribosomal protein L25-likeF: PF01092ECOD (1.6)
L [auth I2]PF01251e7nwgI21 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: 40S ribosomal protein S7-A (From Topology)T: 40S ribosomal protein S7-AF: PF01251ECOD (1.6)
M [auth J2]PF01201e7nwgJ21 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: PF01201ECOD (1.6)
N [auth K2]PF00163,PF01479e7nwgK21 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: PF00163,PF01479ECOD (1.6)
O [auth L2]PF03501e7nwgL21 A: alpha arraysX: HTHH: HTHT: wingedF: PF03501ECOD (1.6)
P [auth M2]PF00366,PF16205e7nwgM21 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00366,PF16205ECOD (1.6)
Q [auth N2]PF01248e7nwgN21 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: PF01248ECOD (1.6)
R [auth O2]PF08069e7nwgO21 A: alpha arraysX: HTHH: 40S ribosomal protein S13 N-terminal domain (From Topology)T: 40S ribosomal protein S13 N-terminal domainF: PF08069ECOD (1.6)
R [auth O2]PF00312e7nwgO22 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: PF00312ECOD (1.6)
S [auth P2]PF00411e7nwgP21 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF00411ECOD (1.6)
T [auth Q2]PF00203e7nwgQ21 A: a+b two layersX: Ribosomal protein S19 (From Topology)H: Ribosomal protein S19 (From Topology)T: Ribosomal protein S19F: PF00203ECOD (1.6)
U [auth R2]PF00380e7nwgR21 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: PF00380ECOD (1.6)
V [auth S2]PF00833e7nwgS21 A: alpha arraysX: HTHH: HTHT: FF domainF: PF00833ECOD (1.6)
W [auth T2]PF00416e7nwgT21 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: PF00416ECOD (1.6)
X [auth U2]PF01090e7nwgU21 A: alpha arraysX: HTHH: HTHT: wingedF: PF01090ECOD (1.6)
Y [auth V2]PF00338e7nwgV21 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: PF00338ECOD (1.6)
Z [auth W2]PF01249e7nwgW21 A: a+b two layersX: 40S ribosomal protein rpS21 (S21e) (From Topology)H: 40S ribosomal protein rpS21 (S21e) (From Topology)T: 40S ribosomal protein rpS21 (S21e)F: PF01249ECOD (1.6)
AA [auth X2]PF00410e7nwgX22 A: a+b two layersX: R3H domain-likeH: Ribosomal protein S8, N-terminal domain (From Topology)T: Ribosomal protein S8, N-terminal domainF: PF00410ECOD (1.6)
AA [auth X2]PF00410e7nwgX21 A: a+b two layersX: Ribosomal protein S8, C-terminal domain (From Topology)H: Ribosomal protein S8, C-terminal domain (From Topology)T: Ribosomal protein S8, C-terminal domainF: PF00410ECOD (1.6)
BA [auth Y2]PF00164e7nwgY21 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00164ECOD (1.6)
CA [auth Z2]PF01282e7nwgZ21 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: PF01282ECOD (1.6)
DA [auth a2]PF03297e7nwga21 A: alpha arraysX: HTHH: HTHT: wingedF: PF03297ECOD (1.6)
EA [auth b2]PF01283e7nwgb21 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: PF01283ECOD (1.6)
FA [auth c2]PF01667e7nwgc21 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01667ECOD (1.6)
GA [auth d2]PF01200e7nwgd21 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF01200ECOD (1.6)
HA [auth e2]PF00253e7nwge21 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: PF00253ECOD (1.6)
IA [auth f2]PF04758e7nwgf21 A: extended segmentsX: 40S ribosomal protein S30 (S30e) (From Topology)H: 40S ribosomal protein S30 (S30e) (From Topology)T: 40S ribosomal protein S30 (S30e)F: PF04758ECOD (1.6)
JA [auth g2]PF01599e7nwgg21 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01599ECOD (1.6)
KA [auth h2]PF00400e7nwgh21 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 7-bladedF: PF00400ECOD (1.6)
LA [auth A3]PF00181e7nwgA32 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00181ECOD (1.6)
LA [auth A3]PF03947e7nwgA31 A: beta barrelsX: SH3H: SH3T: SH3F: PF03947ECOD (1.6)
MA [auth B3]PF00297e7nwgB31 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PF00297ECOD (1.6)
NA [auth C3]PF00573e7nwgC32 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: PF00573ECOD (1.6)
NA [auth C3]PF14374e7nwgC31 A: extended segmentsX: C-terminal helical region in 60S ribosomal protein L4 (L4p) (From Topology)H: C-terminal helical region in 60S ribosomal protein L4 (L4p) (From Topology)T: C-terminal helical region in 60S ribosomal protein L4 (L4p)F: PF14374ECOD (1.6)
OA [auth D3]PF14204,PF17144e7nwgD31 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF14204,PF17144ECOD (1.6)
PA [auth E3]PF01159,PF03868e7nwgE31 A: beta barrelsX: SH3H: SH3T: SH3F: PF01159,PF03868ECOD (1.6)
QA [auth F3]PF00327,PF08079e7nwgF31 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: PF00327,PF08079ECOD (1.6)
RA [auth G3]PF01248e7nwgG31 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: PF01248ECOD (1.6)
SA [auth H3]PF00347e7nwgH31 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: PF00347ECOD (1.6)
TA [auth I3]PF00252e7nwgI31 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: PF00252ECOD (1.6)
UA [auth J3]PF00281,PF00673e7nwgJ31 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: PF00281,PF00673ECOD (1.6)
VA [auth L3]PF01294e7nwgL31 A: extended segmentsX: RPL13 (From Topology)H: RPL13 (From Topology)T: RPL13F: PF01294ECOD (1.6)
WA [auth M3]PF00467,PF01929e7nwgM31 A: beta barrelsX: SH3H: SH3T: SH3F: PF00467,PF01929ECOD (1.6)
E [auth B2]PF00318e7nwgB21 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: PF00318ECOD (1.6)
XA [auth N3]PF00827e7nwgN31 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: PF00827ECOD (1.6)
YA [auth O3]PF00572e7nwgO31 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: PF00572ECOD (1.6)
ZA [auth P3]PF00237e7nwgP31 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: PF00237ECOD (1.6)
AB [auth Q3]PF17135e7nwgQ31 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: PF17135ECOD (1.6)
BB [auth R3]PF01280e7nwgR32 A: alpha arraysX: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)H: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)T: Ribosomal protein L19 (L19e) N-terminal domainF: PF01280ECOD (1.6)
BB [auth R3]PF01280e7nwgR31 A: alpha bundlesX: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)H: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)T: Ribosomal protein L19 (L19e) C-terminal domainF: PF01280ECOD (1.6)
CB [auth S3]F_UNCLASSIFIEDe7nwgS32 A: a+b two layersX: GP2-likeH: RplX-like (From Topology)T: RplX-likeF: F_UNCLASSIFIEDECOD (1.6)
CB [auth S3]PF01775e7nwgS31 A: a+b two layersX: GP2-likeH: RplX-like (From Topology)T: RplX-likeF: PF01775ECOD (1.6)
DB [auth T3]PF01157e7nwgT31 A: beta barrelsX: SH3H: SH3T: SH3F: PF01157ECOD (1.6)
EB [auth U3]PF01776e7nwgU31 A: a+b two layersX: Ribosomal protein L22e (From Topology)H: Ribosomal protein L22e (From Topology)T: Ribosomal protein L22eF: PF01776ECOD (1.6)
FB [auth V3]PF00238e7nwgV31 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: PF00238ECOD (1.6)
GB [auth X3]PF00276,PF03939e7nwgX31 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: PF00276,PF03939ECOD (1.6)
F [auth C2]PF01015e7nwgC22 A: beta barrelsX: Ribosomal protein L25-likeH: 40S ribosomal protein S3A N-terminal domain (From Topology)T: 40S ribosomal protein S3A N-terminal domainF: PF01015ECOD (1.6)
F [auth C2]PF01015e7nwgC21 A: a+b two layersX: T-foldH: 40S ribosomal protein S3A C-terminal domain (From Topology)T: 40S ribosomal protein S3A C-terminal domainF: PF01015ECOD (1.6)
HB [auth Y3]PF16906e7nwgY31 A: beta barrelsX: SH3H: SH3T: SH3F: PF16906ECOD (1.6)
IB [auth Z3]PF00467,PF01777e7nwgZ31 A: beta barrelsX: SH3H: SH3T: SH3F: PF00467,PF01777ECOD (1.6)
JB [auth a3]PF00828e7nwga31 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: PF00828ECOD (1.6)
KB [auth b3]PF01779e7nwgb31 A: extended segmentsX: RPL29 (From Topology)H: RPL29 (From Topology)T: RPL29F: PF01779ECOD (1.6)
LB [auth c3]PF01248e7nwgc31 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: PF01248ECOD (1.6)
MB [auth d3]PF01198e7nwgd31 A: a+b two layersX: Ribosomal protein L31e-likeH: Ribosomal protein L31e/gp120 outer domain (From Topology)T: Ribosomal protein L31e/gp120 outer domainF: PF01198ECOD (1.6)
NB [auth e3]PF01655e7nwge31 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L32e (From Topology)T: Ribosomal protein L32eF: PF01655ECOD (1.6)
OB [auth f3]PF01247e7nwgf31 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: PF01247ECOD (1.6)
PB [auth g3]PF01199e7nwgg31 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: RPL34 (From Topology)T: RPL34F: PF01199ECOD (1.6)
QB [auth h3]PF00831e7nwgh31 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: PF00831ECOD (1.6)
G [auth D2]PF03719e7nwgD21 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: PF03719ECOD (1.6)
G [auth D2]PF00333e7nwgD22 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: PF00333ECOD (1.6)
G [auth D2]PF00333e7nwgD23 A: extended segmentsX: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)H: N-terminal region in 40S ribosomal protein rpS2 (S5p) (From Topology)T: N-terminal region in 40S ribosomal protein rpS2 (S5p)F: PF00333ECOD (1.6)
RB [auth i3]PF01158e7nwgi31 A: alpha arraysX: 60S ribosomal protein rpL36 (L36e) (From Topology)H: 60S ribosomal protein rpL36 (L36e) (From Topology)T: 60S ribosomal protein rpL36 (L36e)F: PF01158ECOD (1.6)
SB [auth j3]PF01907e7nwgj31 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01907ECOD (1.6)
TB [auth k3]PF01781e7nwgk31 A: a+b two layersX: SRP9/14-likeH: Signal recognition particle alu RNA binding heterodimer SRP9/14-related (From Topology)T: Signal recognition particle alu RNA binding heterodimer SRP9/14-relatedF: PF01781ECOD (1.6)
UB [auth l3]PF00832e7nwgl31 A: extended segmentsX: Ribosomal protein L39e (From Topology)H: Ribosomal protein L39e (From Topology)T: Ribosomal protein L39eF: PF00832ECOD (1.6)
VB [auth m3]PF01020e7nwgm31 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01020ECOD (1.6)
WB [auth n3]PF05162e7nwgn31 A: extended segmentsX: Ribosomal protein L41-A (From Topology)H: Ribosomal protein L41-A (From Topology)T: Ribosomal protein L41-AF: PF05162ECOD (1.6)
XB [auth o3]PF00935e7nwgo31 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF00935ECOD (1.6)
YB [auth p3]PF01780e7nwgp31 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01780ECOD (1.6)
ZB [auth r3]PF01778e7nwgr31 A: a+b two layersX: RPL28 (From Topology)H: RPL28 (From Topology)T: RPL28F: PF01778ECOD (1.6)
H [auth E2]PF00189e7nwgE21 A: a+b two layersX: T-foldH: Ribosomal protein S3-C (From Topology)T: Ribosomal protein S3-CF: PF00189ECOD (1.6)
H [auth E2]PF07650e7nwgE22 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: PF07650ECOD (1.6)
BC [auth t3]PF00466e7nwgt32 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein L10-like (From Topology)T: Ribosomal protein L10-likeF: PF00466ECOD (1.6)
BC [auth t3]PF17777e7nwgt31 A: a+b two layersX: Insertion domain in 60S ribosomal protein rpP0 (L10P) (From Topology)H: Insertion domain in 60S ribosomal protein rpP0 (L10P) (From Topology)T: Insertion domain in 60S ribosomal protein rpP0 (L10P)F: PF17777ECOD (1.6)
CC [auth u3]PF00298e7nwgu31 A: alpha arraysX: HTHH: HTHT: Ribosomal protein L11, C-terminal domainF: PF00298ECOD (1.6)
CC [auth u3]PF03946e7nwgu32 A: a+b two layersX: Ribosomal protein L11/L12e N-terminal domain-likeH: Ribosomal protein L11/L12e N-terminal domain (From Topology)T: Ribosomal protein L11/L12e N-terminal domainF: PF03946ECOD (1.6)
FC [auth w3]PF00687e7nwgw32 A: a+b two layersX: a+b domain in Ribosomal protein L1 (From Topology)H: a+b domain in Ribosomal protein L1 (From Topology)T: a+b domain in Ribosomal protein L1F: PF00687ECOD (1.6)
FC [auth w3]PF00687e7nwgw31 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Rossmann-like domain in Ribosomal protein L1 (From Topology)T: Rossmann-like domain in Ribosomal protein L1F: PF00687ECOD (1.6)
HC [auth W]PF01246e7nwgW1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: PF01246ECOD (1.6)
I [auth F2]PF00900e7nwgF23 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00900ECOD (1.6)
I [auth F2]PF00467,PF16121e7nwgF22 A: beta barrelsX: SH3H: SH3T: SH3F: PF00467,PF16121ECOD (1.6)
I [auth F2]PF00900,PF01479,PF08071e7nwgF21 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: PF00900,PF01479,PF08071ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
J [auth G2]PF00240Ubiquitin family (ubiquitin)Ubiquitin familyThis family contains a number of ubiquitin-like proteins: SUMO (smt3 homologue) (see Swiss:Q02724), Nedd8 (see Swiss:P29595), Elongin B (see Swiss:Q15370), Rub1 (see Swiss:Q9SHE7), and Parkin (see Swiss:O60260). A number of them are thought to carry ...This family contains a number of ubiquitin-like proteins: SUMO (smt3 homologue) (see Swiss:Q02724), Nedd8 (see Swiss:P29595), Elongin B (see Swiss:Q15370), Rub1 (see Swiss:Q9SHE7), and Parkin (see Swiss:O60260). A number of them are thought to carry a distinctive five-residue motif termed the proteasome-interacting motif (PIM), which may have a biologically significant role in protein delivery to proteasomes and recruitment of proteasomes to transcription sites [5].
Domain
J [auth G2]PF00177Ribosomal protein S7p/S5e (Ribosomal_S7)Ribosomal protein S7p/S5eThis family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes.Domain
J [auth G2]PF01599Ribosomal protein S27a (Ribosomal_S27)Ribosomal protein S27aThis family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins ...This family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins as extensions of ubiquitin promotes their incorporation into nascent ribosomes by a transient metabolic stabilisation and is required for efficient ribosome biogenesis [3]. The ribosomal extension protein S27a contains a basic region that is proposed to form a zinc finger; its fusion gene is proposed as a mechanism to maintain a fixed ratio between ubiquitin necessary for degrading proteins and ribosomes a source of proteins [2].
Domain
K [auth H2]PF01092Ribosomal protein S6e (Ribosomal_S6e)Ribosomal protein S6e- Family
K [auth H2]PF00400WD domain, G-beta repeat (WD40)WD domain, G-beta repeat- Repeat
M [auth J2]PF01201Ribosomal protein S8e (Ribosomal_S8e)Ribosomal protein S8e- Family
N [auth K2]PF00163Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)Ribosomal protein S4/S9 N-terminal domain- Family
N [auth K2]PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
O [auth L2]PF03501Plectin/S10 domain (S10_plectin)Plectin/S10 domainThis presumed domain is found at the N-terminus of some isoforms of the cytoskeletal muscle protein plectin as well as the ribosomal S10 protein. This domain may be involved in RNA binding.Domain
P [auth M2]PF16205Ribosomal_S17 N-terminal (Ribosomal_S17_N)Ribosomal_S17 N-terminal- Family
P [auth M2]PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17- Domain
Q [auth N2]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
R [auth O2]PF08069Ribosomal S13/S15 N-terminal domain (Ribosomal_S13_N)Ribosomal S13/S15 N-terminal domainThis domain is found at the N-terminus of ribosomal S13 and S15 proteins. This domain is also identified as NUC021 [1].Domain
R [auth O2]PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15- Domain
S [auth P2]PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
T [auth Q2]PF00203Ribosomal protein S19 (Ribosomal_S19)Ribosomal protein S19- Domain
U [auth R2]PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
W [auth T2]PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
X [auth U2]PF01090Ribosomal protein S19e (Ribosomal_S19e)Ribosomal protein S19e- Family
Z [auth W2]PF01249Ribosomal protein S21e (Ribosomal_S21e)Ribosomal protein S21e- Family
BA [auth Y2]PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23- Family
MA [auth B3]PF01779Ribosomal L29e protein family (Ribosomal_L29e)Ribosomal L29e protein family- Family
NA [auth C3]PF1437460S ribosomal protein L4 C-terminal domain (Ribos_L4_asso_C)60S ribosomal protein L4 C-terminal domainThis family is found at the very C-terminal of 60 ribosomal L4 proteins.Domain
NA [auth C3]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
NA [auth C3]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
OA [auth D3]PF01198Ribosomal protein L31e (Ribosomal_L31e)Ribosomal protein L31e- Family
PA [auth E3]PF01655Ribosomal protein L32 (Ribosomal_L32e)Ribosomal protein L32- Family
PA [auth E3]PF01159Ribosomal protein L6e (Ribosomal_L6e)Ribosomal protein L6e- Family
QA [auth F3]PF08079Ribosomal L30 N-terminal domain (Ribosomal_L30_N)Ribosomal L30 N-terminal domainThis presumed domain is found at the N-terminus of Ribosomal L30 proteins and has been termed RL30NT or NUC018 [1].Domain
QA [auth F3]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7.Domain
QA [auth F3]PF01247Ribosomal protein L35Ae (Ribosomal_L35Ae)Ribosomal protein L35Ae- Domain
RA [auth G3]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
SA [auth H3]PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6- Domain
SA [auth H3]PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
TA [auth I3]PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10e- Domain
UA [auth J3]PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5- Domain
UA [auth J3]PF01907Ribosomal protein L37e (Ribosomal_L37e)Ribosomal protein L37e- Family
UA [auth J3]PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281.Domain
VA [auth L3]PF00832Ribosomal L39 protein (Ribosomal_L39)Ribosomal L39 protein- Family
VA [auth L3]PF01294Ribosomal protein L13e (Ribosomal_L13e)Ribosomal protein L13e- Family
WA [auth M3]PF01929Ribosomal protein L14 (Ribosomal_L14e)Ribosomal protein L14- Family
E [auth B2]PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
E [auth B2]PF1612240S ribosomal protein SA C-terminus (40S_SA_C)40S ribosomal protein SA C-terminus- Family
XA [auth N3]PF00827Ribosomal L15 (Ribosomal_L15e)Ribosomal L15- Family
BB [auth R3]PF01778Ribosomal L28e protein family (Ribosomal_L28e)Ribosomal L28e protein family- Family
BB [auth R3]PF01280Ribosomal protein L19e (Ribosomal_L19e)Ribosomal protein L19e- Family
CB [auth S3]PF01775Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A (Ribosomal_L18A)Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18AThis family includes: archaeal 50S ribosomal protein L18Ae, often referred to as L20e or LX; fungal 60S ribosomal protein L20; and higher eukaryote 60S ribosomal protein L18A.Domain
DB [auth T3]PF17777Insertion domain in 60S ribosomal protein L10P (RL10P_insert)Insertion domain in 60S ribosomal protein L10PThis domain is found in prokaryotic and archaeal ribosomal L10 protein [1].Domain
DB [auth T3]PF01157Ribosomal protein L21e (Ribosomal_L21e)Ribosomal protein L21e- Family
DB [auth T3]PF00466Ribosomal protein L10 (Ribosomal_L10)Ribosomal protein L10- Family
FB [auth V3]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23e- Domain
GB [auth X3]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
F [auth C2]PF01667Ribosomal protein S27 (Ribosomal_S27e)Ribosomal protein S27- Family
HB [auth Y3]PF16906Ribosomal proteins L26 eukaryotic, L24P archaeal (Ribosomal_L26)Ribosomal proteins L26 eukaryotic, L24P archaeal- Family
HB [auth Y3]PF00467KOW motif (KOW)KOW motif- Family
IB [auth Z3]PF01777Ribosomal L27e protein family (Ribosomal_L27e)Ribosomal L27e protein family- Family
IB [auth Z3]PF00467KOW motif (KOW)KOW motif- Family
H [auth E2]PF07650KH domain (KH_2)KH domain- Domain
H [auth E2]PF00253Ribosomal protein S14p/S29e (Ribosomal_S14)Ribosomal protein S14p/S29e- Family
H [auth E2]PF00189Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)Ribosomal protein S3, C-terminal domainThis family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer.Domain
HC [auth W]PF01246Ribosomal protein L24e (Ribosomal_L24e)Ribosomal protein L24e- Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth 51]28S Ribosomal RNA---
J [auth G2]Ribosomal protein S5
K [auth H2]40S ribosomal protein S6
L [auth I2]ribosomal protein eS7
M [auth J2]40S ribosomal protein S8
N [auth K2]40S ribosomal protein S9
O [auth L2]40S ribosomal protein S10 -
P [auth M2]40S ribosomal protein S11
Q [auth N2]40S ribosomal protein S12
R [auth O2]ribosomal protein uS15
S [auth P2]uS11
B [auth 71]5S Ribosomal RNA---
T [auth Q2]40S ribosomal protein uS19
U [auth R2]Ribosomal protein S16
V [auth S2]40S ribosomal protein S17
W [auth T2]40S ribosomal protein uS13
X [auth U2]S19
Y [auth V2]40S ribosomal protein S20---
Z [auth W2]40S ribosomal protein S21
AA [auth X2]Ribosomal protein S15a---
BA [auth Y2]Ribosomal protein S23
CA [auth Z2]40S ribosomal protein S24---
C [auth 81]5.8S Ribosomal RNA---
DA [auth a2]ribosomal protein eS25---
EA [auth b2]40S ribosomal protein S26
FA [auth c2]40S ribosomal protein S27
GA [auth d2]40S ribosomal protein S28
HA [auth e2]uS14
IA [auth f2]40S ribosomal protein S30
JA [auth g2]eS31
KA [auth h2]ribosomal protein RACK1
LA [auth A3]L8---
MA [auth B3]uL3
D [auth A2]18S Ribosomal RNA---
NA [auth C3]uL4
OA [auth D3]60S ribosomal protein L5
PA [auth E3]60S ribosomal protein L6
QA [auth F3]uL30
RA [auth G3]L7a
SA [auth H3]L9
TA [auth I3]60S ribosomal protein L10
UA [auth J3]60S ribosomal protein L11
VA [auth L3]L13
WA [auth M3]Ribosomal protein L14
E [auth B2]40S ribosomal protein SA
XA [auth N3]Ribosomal protein L15
YA [auth O3]60S RIBOSOMAL PROTEIN UL13---
ZA [auth P3]uL22---
AB [auth Q3]L18---
BB [auth R3]60S ribosomal protein L19
CB [auth S3]60S ribosomal protein L18a
DB [auth T3]eL21
EB [auth U3]L22---
FB [auth V3]eL14
GB [auth X3]uL23
F [auth C2]40S ribosomal protein S3a
HB [auth Y3]Ribosomal protein L26
IB [auth Z3]60S ribosomal protein L27
JB [auth a3]uL15---
KB [auth b3]eL29
LB [auth c3]eL30
MB [auth d3]eL31
NB [auth e3]eL32
OB [auth f3]eL33
PB [auth g3]60S ribosomal protein L34
QB [auth h3]uL29
G [auth D2]40S ribosomal protein S2---
RB [auth i3]60S ribosomal protein L36---
SB [auth j3]Ribosomal protein L37
TB [auth k3]L38---
UB [auth l3]eL39
VB [auth m3]60S RIBOSOMAL PROTEIN EL40---
WB [auth n3]60s ribosomal protein l41
XB [auth o3]eL42---
YB [auth p3]ribosomal protein eL43---
ZB [auth r3]eL28
AC [auth q3]A/P-Site tRNA---
H [auth E2]40S ribosomal protein S3
BC [auth t3]60S acidic ribosomal protein P0
CC [auth u3]uL12---
DC [auth v3]mRNA---
EC [auth 33]P/E-Site tRNA---
FC [auth w3]Ribosomal protein
GC [auth 1]Sec61Beta---
HC [auth W]60S ribosomal protein L24-like protein
I [auth F2]S4---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
J [auth G2]IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
J [auth G2]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
J [auth G2]IPR000235Small ribosomal subunit protein uS7Family
J [auth G2]IPR023798Small ribosomal subunit protein uS7 domainDomain
J [auth G2]IPR005716Ribosomal protein uS7, eukaryotic/archaealFamily
K [auth H2]IPR014401Small ribosomal subunit protein eS6-likeFamily
K [auth H2]IPR001377Small ribosomal subunit protein eS6Family
K [auth H2]IPR018282Small ribosomal subunit protein eS6, conserved siteConserved Site
L [auth I2]IPR000554Small ribosomal subunit protein eS7Family
L [auth I2]IPR047861Small ribosomal subunit protein eS7, conserved siteConserved Site
M [auth J2]IPR001047Small ribosomal subunit protein eS8Family
M [auth J2]IPR042563Small ribosomal subunit protein eS8 subdomain, eukaryotesHomologous Superfamily
M [auth J2]IPR022309Ribosomal protein eS8/ribosomal biogenesis NSA2Family
M [auth J2]IPR018283Small ribosomal subunit protein eS8, conserved siteConserved Site
N [auth K2]IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
N [auth K2]IPR002942RNA-binding S4 domainDomain
N [auth K2]IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
N [auth K2]IPR005710Small ribosomal subunit protein uS4, eukaryotic/archaealFamily
N [auth K2]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
N [auth K2]IPR022801Small ribosomal subunit protein uS4Family
O [auth L2]IPR037447Small ribosomal subunit protein eS10Family
O [auth L2]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
O [auth L2]IPR005326Plectin/eS10, N-terminalDomain
P [auth M2]IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
P [auth M2]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
P [auth M2]IPR000266Small ribosomal subunit protein uS17Family
P [auth M2]IPR032440Small ribosomal subunit protein uS17, N-terminalDomain
P [auth M2]IPR028333Small ribosomal subunit protein uS17, archaeal/eukaryoticFamily
Q [auth N2]IPR000530Small ribosomal subunit protein eS12Family
Q [auth N2]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
Q [auth N2]IPR047860Small ribosomal subunit protein eS12, conserved siteConserved Site
Q [auth N2]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
R [auth O2]IPR012606Small ribosomal subunit protein uS15, N-terminalDomain
R [auth O2]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
R [auth O2]IPR023029Small ribosomal subunit protein uS15, archaea/eukaryotesFamily
R [auth O2]IPR000589Small ribosomal subunit protein uS15Family
S [auth P2]IPR001971Small ribosomal subunit protein uS11Family
S [auth P2]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
S [auth P2]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
T [auth Q2]IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
T [auth Q2]IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
T [auth Q2]IPR005713Small ribosomal subunit protein uS19, eukaryotic/archaealFamily
T [auth Q2]IPR002222Small ribosomal subunit protein uS19Family
U [auth R2]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
U [auth R2]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
U [auth R2]IPR000754Small ribosomal subunit protein uS9Family
U [auth R2]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
V [auth S2]IPR036401Small ribosomal subunit protein eS17 superfamilyHomologous Superfamily
V [auth S2]IPR001210Small ribosomal subunit protein eS17Family
V [auth S2]IPR018273Small ribosomal subunit protein eS17, conserved siteConserved Site
W [auth T2]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
W [auth T2]IPR001892Small ribosomal subunit protein uS13Family
W [auth T2]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
W [auth T2]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
X [auth U2]IPR001266Small ribosomal subunit protein eS19Family
X [auth U2]IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
X [auth U2]IPR018277Small ribosomal subunit protein eS19, conserved siteConserved Site
X [auth U2]IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily
Z [auth W2]IPR038579Small ribosomal subunit protein eS21 superfamilyHomologous Superfamily
Z [auth W2]IPR018279Small ribosomal subunit protein eS21, conserved siteConserved Site
Z [auth W2]IPR001931Small ribosomal subunit protein eS21Family
BA [auth Y2]IPR006032Small ribosomal subunit protein uS12Family
BA [auth Y2]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
BA [auth Y2]IPR005680Small ribosomal subunit protein uS12, eukaryotic/archaealFamily
EA [auth b2]IPR038551Ribosomal protein eS26 superfamilyHomologous Superfamily
EA [auth b2]IPR000892Small ribosomal subunit protein eS26Family
EA [auth b2]IPR047864Ribosomal protein eS26, conserved siteConserved Site
FA [auth c2]IPR023407Small ribosomal subunit protein eS27, zinc-binding domain superfamilyHomologous Superfamily
FA [auth c2]IPR000592Small ribosomal subunit protein eS27Family
FA [auth c2]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
GA [auth d2]IPR028626Ribosomal protein eS28 conserved siteConserved Site
GA [auth d2]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
GA [auth d2]IPR000289Small ribosomal subunit protein eS28Family
HA [auth e2]IPR001209Small ribosomal subunit protein uS14Family
HA [auth e2]IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
HA [auth e2]IPR039744Small ribosomal subunit protein uS14, eukaryotes/archaeaFamily
HA [auth e2]IPR043140Small ribosomal subunit protein uS14 superfamilyHomologous Superfamily
IA [auth f2]IPR039415Ubiquitin-like protein FUBIDomain
IA [auth f2]IPR019956Ubiquitin domainDomain
IA [auth f2]IPR019954Ubiquitin conserved siteConserved Site
IA [auth f2]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
IA [auth f2]IPR000626Ubiquitin-like domainDomain
IA [auth f2]IPR006846Small ribosomal subunit protein eS30Family
JA [auth g2]IPR019954Ubiquitin conserved siteConserved Site
JA [auth g2]IPR000626Ubiquitin-like domainDomain
JA [auth g2]IPR038582Small ribosomal subunit protein eS31 eukaryotic-type superfamilyHomologous Superfamily
JA [auth g2]IPR002906Small ribosomal subunit protein eS31Domain
JA [auth g2]IPR019956Ubiquitin domainDomain
JA [auth g2]IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily
JA [auth g2]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
KA [auth h2]IPR019775WD40 repeat, conserved siteConserved Site
KA [auth h2]IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
KA [auth h2]IPR045223Small ribosomal subunit protein RACK1-likeFamily
KA [auth h2]IPR001680WD40 repeatRepeat
KA [auth h2]IPR020472G-protein beta WD-40 repeatRepeat
KA [auth h2]IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
MA [auth B3]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
MA [auth B3]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
MA [auth B3]IPR045077Large ribosomal subunit protein uL3, archaeal/eukaryotic-typeFamily
MA [auth B3]IPR044892Ribosomal protein L3, domain 3, archaeal-type superfamilyHomologous Superfamily
MA [auth B3]IPR000597Large ribosomal subunit protein uL3Family
NA [auth C3]IPR025755Large ribosomal subunit protein uL4, C-terminal domainDomain
NA [auth C3]IPR002136Large ribosomal subunit protein uL4Family
NA [auth C3]IPR013000Large ribosomal subunit protein uL4, eukaryotic/archaeal, conserved siteConserved Site
NA [auth C3]IPR045240Large ribosomal subunit protein uL4, eukaryotic and archaeal typeFamily
NA [auth C3]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
OA [auth D3]IPR005485Large ribosomal subunit protein uL18 eukaryotic/archaealFamily
OA [auth D3]IPR025607Large ribosomal subunit protein uL18, C-terminal, eukaryotesDomain
PA [auth E3]IPR005568Large ribosomal subunit protein uL6, N-terminalDomain
PA [auth E3]IPR049633Large ribosomal subunit protein eL6, conserved siteConserved Site
PA [auth E3]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
PA [auth E3]IPR041997Large ribosomal subunit protein eL6, KOW domainDomain
PA [auth E3]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
PA [auth E3]IPR000915Large ribosomal subunit protein eL6Family
QA [auth F3]IPR035808Large ribosomal subunit protein uL30, eukaryotic/archaealDomain
QA [auth F3]IPR012988Large ribosomal subunit protein uL30, N-terminal, eukaryotesDomain
QA [auth F3]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
QA [auth F3]IPR039699Large ribosomal subunit protein uL30Family
QA [auth F3]IPR005998Large ribosomal subunit protein uL30, eukaryoticFamily
QA [auth F3]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
QA [auth F3]IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
RA [auth G3]IPR001921Large ribosomal subunit protein eL8Family
RA [auth G3]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
RA [auth G3]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
RA [auth G3]IPR018492Ribosomal protein eL8/Nhp2 familyFamily
SA [auth H3]IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
SA [auth H3]IPR002359Large ribosomal subunit protein uL6, conserved site-2Conserved Site
SA [auth H3]IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
SA [auth H3]IPR000702Large ribosomal subunit protein uL6-likeFamily
TA [auth I3]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
TA [auth I3]IPR001197Large ribosomal subunit protein uL16, eukaryotes/archaeaFamily
TA [auth I3]IPR016180Large ribosomal subunit protein uL16 domainDomain
TA [auth I3]IPR047873Large ribosomal subunit protein uL16Family
TA [auth I3]IPR018255Large ribosomal subunit protein uL16, conserved site, eukaryotes/archaeaConserved Site
UA [auth J3]IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
UA [auth J3]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
UA [auth J3]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
UA [auth J3]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
UA [auth J3]IPR002132Large ribosomal subunit protein uL5Family
VA [auth L3]IPR001380Large ribosomal subunit protein eL13Family
WA [auth M3]IPR039660Large ribosomal subunit protein eL14Family
WA [auth M3]IPR041985Large ribosomal subunit protein eL14, KOW motifDomain
WA [auth M3]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
WA [auth M3]IPR002784Large ribosomal subunit protein eL14 domainDomain
WA [auth M3]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
E [auth B2]IPR032281Small ribosomal subunit protein uS2, C-terminal domainDomain
E [auth B2]IPR027504Small ribosomal subunit protein uS2, vertebratesFamily
E [auth B2]IPR005707Small ribosomal subunit protein uS2, eukaryotic/archaealFamily
E [auth B2]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
E [auth B2]IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
E [auth B2]IPR001865Small ribosomal subunit protein uS2Family
E [auth B2]IPR027498Small ribosomal subunit protein uS2, eukaryoticFamily
XA [auth N3]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
XA [auth N3]IPR020925Large ribosomal subunit protein eL15, conserved siteConserved Site
XA [auth N3]IPR024794Large ribosomal subunit protein eL15 core domain superfamilyHomologous Superfamily
XA [auth N3]IPR000439Large ribosomal subunit protein eL15Family
BB [auth R3]IPR015972Large ribosomal subunit protein eL19, domain 1Homologous Superfamily
BB [auth R3]IPR039547Large ribosomal subunit protein eL19Family
BB [auth R3]IPR023638Large ribosomal subunit protein eL19, conserved siteConserved Site
BB [auth R3]IPR035970Large ribosomal subunit protein eL19 superfamilyHomologous Superfamily
BB [auth R3]IPR000196Large ribosomal subunit protein eL19 domainDomain
BB [auth R3]IPR033935Large ribosomal subunit protein eL19, eukaryoticDomain
CB [auth S3]IPR028877Large ribosomal subunit protein eL20Family
CB [auth S3]IPR023573Large ribosomal subunit protein eL20 domainDomain
CB [auth S3]IPR021138Large ribosomal subunit protein eL20, eukaryotesFamily
DB [auth T3]IPR018259Large ribosomal subunit protein eL21, conserved siteConserved Site
DB [auth T3]IPR036948Large ribosomal subunit protein eL21 superfamilyHomologous Superfamily
DB [auth T3]IPR001147Large ribosomal subunit protein eL21Family
DB [auth T3]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
FB [auth V3]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
FB [auth V3]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
FB [auth V3]IPR000218Large ribosomal subunit protein uL14Family
GB [auth X3]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
GB [auth X3]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
GB [auth X3]IPR005633Large ribosomal subunit protein uL23, N-terminalDomain
GB [auth X3]IPR019985Large ribosomal subunit protein uL23Family
GB [auth X3]IPR001014Large ribosomal subunit protein uL23, conserved siteConserved Site
GB [auth X3]IPR013025Large ribosomal subunit protein uL23-likeFamily
F [auth C2]IPR001593Small ribosomal subunit protein eS1Family
F [auth C2]IPR018281Small ribosomal subunit protein eS1, conserved siteConserved Site
F [auth C2]IPR027500Small ribosomal subunit protein eS1, eukaryotesFamily
HB [auth Y3]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
HB [auth Y3]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
HB [auth Y3]IPR005756Large ribosomal subunit protein uL24, eukaryotic/archaealFamily
HB [auth Y3]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
HB [auth Y3]IPR005824KOWDomain
HB [auth Y3]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
IB [auth Z3]IPR018262Large ribosomal subunit protein eL27, conserved siteConserved Site
IB [auth Z3]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
IB [auth Z3]IPR001141Large ribosomal subunit protein eL27Family
IB [auth Z3]IPR038655Large ribosomal subunit protein eL27 superfamilyHomologous Superfamily
IB [auth Z3]IPR005824KOWDomain
IB [auth Z3]IPR041991Large ribosomal subunit protein eL27, KOW domainDomain
KB [auth b3]IPR002673Large ribosomal subunit protein eL29Family
LB [auth c3]IPR022991Large ribosomal subunit protein eL30, conserved siteConserved Site
LB [auth c3]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
LB [auth c3]IPR000231Large ribosomal subunit protein eL30Family
LB [auth c3]IPR039109Large ribosomal subunit protein eL30-likeFamily
LB [auth c3]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
MB [auth d3]IPR020052Large ribosomal subunit protein eL31, conserved siteConserved Site
MB [auth d3]IPR023621Large ribosomal subunit protein eL31 domain superfamilyHomologous Superfamily
MB [auth d3]IPR000054Large ribosomal subunit protein eL31Family
NB [auth e3]IPR036351Large ribosomal subunit protein eL32 superfamilyHomologous Superfamily
NB [auth e3]IPR001515Large ribosomal subunit protein eL32Family
NB [auth e3]IPR018263Large ribosomal subunit protein eL32, conserved siteConserved Site
OB [auth f3]IPR038661Large ribosomal subunit protein eL33 superfamilyHomologous Superfamily
OB [auth f3]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
OB [auth f3]IPR001780Large ribosomal subunit protein eL33Family
OB [auth f3]IPR018266Large ribosomal subunit protein eL33, conserved siteConserved Site
PB [auth g3]IPR008195Large ribosomal subunit protein eL34Family
PB [auth g3]IPR018065Large ribosomal subunit protein eL34, conserved siteConserved Site
QB [auth h3]IPR045059Large ribosomal subunit protein uL29, eukaryotesFamily
QB [auth h3]IPR001854Large ribosomal subunit protein uL29Family
QB [auth h3]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
QB [auth h3]IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
SB [auth j3]IPR001569Large ribosomal subunit protein eL37Family
SB [auth j3]IPR018267Large ribosomal subunit protein eL37, conserved siteConserved Site
SB [auth j3]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
SB [auth j3]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
UB [auth l3]IPR023626Large ribosomal subunit protein eL39 domain superfamilyHomologous Superfamily
UB [auth l3]IPR000077Large ribosomal subunit protein eL39Family
UB [auth l3]IPR020083Large ribosomal subunit protein eL39, conserved siteConserved Site
WB [auth n3]IPR007836Large ribosomal subunit protein eS32Family
ZB [auth r3]IPR029004Ribosomal eL28/Mak16Domain
ZB [auth r3]IPR002672Large ribosomal subunit protein eL28Family
H [auth E2]IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
H [auth E2]IPR004044K Homology domain, type 2Domain
H [auth E2]IPR015946K homology domain-like, alpha/betaHomologous Superfamily
H [auth E2]IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
H [auth E2]IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
H [auth E2]IPR005703Small ribosomal subunit protein uS3, eukaryotic/archaealFamily
H [auth E2]IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site
BC [auth t3]IPR043141Large ribosomal subunit protein uL10-like domain superfamilyHomologous Superfamily
BC [auth t3]IPR001790Large ribosomal subunit protein uL10Family
BC [auth t3]IPR043164Large ribosomal subunit protein uL10-like, insertion domain superfamilyHomologous Superfamily
BC [auth t3]IPR030670Large ribosomal subunit protein uL10, eukaryotesFamily
BC [auth t3]IPR040637Large ribosomal subunit protein uL10-like, insertion domainDomain
FC [auth w3]IPR023673Large ribosomal subunit protein uL1, conserved siteConserved Site
FC [auth w3]IPR016095Large ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domainHomologous Superfamily
FC [auth w3]IPR023674Ribosomal protein uL1-likeHomologous Superfamily
FC [auth w3]IPR002143Large ribosomal subunit protein uL1Family
FC [auth w3]IPR028364Ribosomal protein uL1/ribosomal biogenesis proteinFamily
HC [auth W]IPR011017TRASH domainDomain
HC [auth W]IPR000988Large ribosomal subunit protein eL24-relatedFamily
HC [auth W]IPR023442Large ribosomal subunit protein eL24, conserved siteConserved Site
HC [auth W]IPR038630Ribosomal protein L24e/L24 superfamilyHomologous Superfamily