Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyCysteine proteinases 8103488 3001808 SCOP2B (2022-06-29)
EA [auth e]SCOP2B SuperfamilyCysteine proteinases 8103488 3001808 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyCysteine proteinases 8103488 3001808 SCOP2B (2022-06-29)
KA [auth k]SCOP2B SuperfamilyCysteine proteinases 8103488 3001808 SCOP2B (2022-06-29)
MSCOP2B SuperfamilyCysteine proteinases 8103488 3001808 SCOP2B (2022-06-29)
SSCOP2B SuperfamilyCysteine proteinases 8103488 3001808 SCOP2B (2022-06-29)
YSCOP2B SuperfamilyCysteine proteinases 8103488 3001808 SCOP2B (2022-06-29)
AA [auth a]SCOP2B SuperfamilyUbiquitin-like 8043829 3000157 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyUbiquitin-like 8043829 3000157 SCOP2B (2022-06-29)
BA [auth b]SCOP2B SuperfamilyUbiquitin-like 8043829 3000157 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyUbiquitin-like 8043829 3000157 SCOP2B (2022-06-29)
CA [auth c]SCOP2B SuperfamilyUbiquitin-like 8043829 3000157 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyUbiquitin-like 8043829 3000157 SCOP2B (2022-06-29)
DA [auth d]SCOP2B SuperfamilyUbiquitin-like 8043829 3000157 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyUbiquitin-like 8043829 3000157 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyUbiquitin-like 8043829 3000157 SCOP2B (2022-06-29)
FA [auth f]SCOP2B SuperfamilyUbiquitin-like 8043829 3000157 SCOP2B (2022-06-29)
GA [auth g]SCOP2B SuperfamilyUbiquitin-like 8043829 3000157 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyUbiquitin-like 8043829 3000157 SCOP2B (2022-06-29)
HA [auth h]SCOP2B SuperfamilyUbiquitin-like 8043829 3000157 SCOP2B (2022-06-29)
ISCOP2B SuperfamilyUbiquitin-like 8043829 3000157 SCOP2B (2022-06-29)
IA [auth i]SCOP2B SuperfamilyUbiquitin-like 8043829 3000157 SCOP2B (2022-06-29)
JSCOP2B SuperfamilyUbiquitin-like 8043829 3000157 SCOP2B (2022-06-29)
JA [auth j]SCOP2B SuperfamilyUbiquitin-like 8043829 3000157 SCOP2B (2022-06-29)
KSCOP2B SuperfamilyUbiquitin-like 8043829 3000157 SCOP2B (2022-06-29)
LSCOP2B SuperfamilyUbiquitin-like 8043829 3000157 SCOP2B (2022-06-29)
LA [auth l]SCOP2B SuperfamilyUbiquitin-like 8043829 3000157 SCOP2B (2022-06-29)
MA [auth m]SCOP2B SuperfamilyUbiquitin-like 8043829 3000157 SCOP2B (2022-06-29)
NSCOP2B SuperfamilyUbiquitin-like 8043829 3000157 SCOP2B (2022-06-29)
NA [auth n]SCOP2B SuperfamilyUbiquitin-like 8043829 3000157 SCOP2B (2022-06-29)
OSCOP2B SuperfamilyUbiquitin-like 8043829 3000157 SCOP2B (2022-06-29)
OA [auth o]SCOP2B SuperfamilyUbiquitin-like 8043829 3000157 SCOP2B (2022-06-29)
PSCOP2B SuperfamilyUbiquitin-like 8043829 3000157 SCOP2B (2022-06-29)
PA [auth p]SCOP2B SuperfamilyUbiquitin-like 8043829 3000157 SCOP2B (2022-06-29)
QSCOP2B SuperfamilyUbiquitin-like 8043829 3000157 SCOP2B (2022-06-29)
RSCOP2B SuperfamilyUbiquitin-like 8043829 3000157 SCOP2B (2022-06-29)
TSCOP2B SuperfamilyUbiquitin-like 8043829 3000157 SCOP2B (2022-06-29)
USCOP2B SuperfamilyUbiquitin-like 8043829 3000157 SCOP2B (2022-06-29)
VSCOP2B SuperfamilyUbiquitin-like 8043829 3000157 SCOP2B (2022-06-29)
WSCOP2B SuperfamilyUbiquitin-like 8043829 3000157 SCOP2B (2022-06-29)
XSCOP2B SuperfamilyUbiquitin-like 8043829 3000157 SCOP2B (2022-06-29)
ZSCOP2B SuperfamilyUbiquitin-like 8043829 3000157 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AMINDY_DUBe7npiA1 A: a+b complex topologyX: Cysteine proteinases-likeH: Cysteine proteinases (From Topology)T: Cysteine proteinasesF: MINDY_DUBECOD (1.6)
EA [auth e]MINDY_DUBe7npie1 A: a+b complex topologyX: Cysteine proteinases-likeH: Cysteine proteinases (From Topology)T: Cysteine proteinasesF: MINDY_DUBECOD (1.6)
GMINDY_DUBe7npiG1 A: a+b complex topologyX: Cysteine proteinases-likeH: Cysteine proteinases (From Topology)T: Cysteine proteinasesF: MINDY_DUBECOD (1.6)
KA [auth k]MINDY_DUBe7npik1 A: a+b complex topologyX: Cysteine proteinases-likeH: Cysteine proteinases (From Topology)T: Cysteine proteinasesF: MINDY_DUBECOD (1.6)
MMINDY_DUBe7npiM1 A: a+b complex topologyX: Cysteine proteinases-likeH: Cysteine proteinases (From Topology)T: Cysteine proteinasesF: MINDY_DUBECOD (1.6)
SMINDY_DUBe7npiS1 A: a+b complex topologyX: Cysteine proteinases-likeH: Cysteine proteinases (From Topology)T: Cysteine proteinasesF: MINDY_DUBECOD (1.6)
YMINDY_DUBe7npiY1 A: a+b complex topologyX: Cysteine proteinases-likeH: Cysteine proteinases (From Topology)T: Cysteine proteinasesF: MINDY_DUBECOD (1.6)
AA [auth a]ubiquitin_1e7npia1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Ubiquitin-likeF: ubiquitin_1ECOD (1.6)
Bubiquitin_1e7npiB1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Ubiquitin-likeF: ubiquitin_1ECOD (1.6)
BA [auth b]ubiquitin_1e7npib1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Ubiquitin-likeF: ubiquitin_1ECOD (1.6)
Cubiquitin_1e7npiC1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Ubiquitin-likeF: ubiquitin_1ECOD (1.6)
CA [auth c]ubiquitin_1e7npic1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Ubiquitin-likeF: ubiquitin_1ECOD (1.6)
Dubiquitin_1e7npiD1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Ubiquitin-likeF: ubiquitin_1ECOD (1.6)
DA [auth d]ubiquitin_1e7npid1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Ubiquitin-likeF: ubiquitin_1ECOD (1.6)
Eubiquitin_1e7npiE1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Ubiquitin-likeF: ubiquitin_1ECOD (1.6)
Fubiquitin_1e7npiF1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Ubiquitin-likeF: ubiquitin_1ECOD (1.6)
FA [auth f]ubiquitin_1e7npif1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Ubiquitin-likeF: ubiquitin_1ECOD (1.6)
GA [auth g]ubiquitin_1e7npig1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Ubiquitin-likeF: ubiquitin_1ECOD (1.6)
Hubiquitin_1e7npiH1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Ubiquitin-likeF: ubiquitin_1ECOD (1.6)
HA [auth h]ubiquitin_1e7npih1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Ubiquitin-likeF: ubiquitin_1ECOD (1.6)
Iubiquitin_1e7npiI1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Ubiquitin-likeF: ubiquitin_1ECOD (1.6)
IA [auth i]ubiquitin_1e7npii1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Ubiquitin-likeF: ubiquitin_1ECOD (1.6)
Jubiquitin_1e7npiJ1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Ubiquitin-likeF: ubiquitin_1ECOD (1.6)
JA [auth j]ubiquitin_1e7npij1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Ubiquitin-likeF: ubiquitin_1ECOD (1.6)
Kubiquitin_1e7npiK1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Ubiquitin-likeF: ubiquitin_1ECOD (1.6)
Lubiquitin_1e7npiL1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Ubiquitin-likeF: ubiquitin_1ECOD (1.6)
LA [auth l]ubiquitin_1e7npil1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Ubiquitin-likeF: ubiquitin_1ECOD (1.6)
MA [auth m]ubiquitin_1e7npim1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Ubiquitin-likeF: ubiquitin_1ECOD (1.6)
Nubiquitin_1e7npiN1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Ubiquitin-likeF: ubiquitin_1ECOD (1.6)
NA [auth n]ubiquitin_1e7npin1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Ubiquitin-likeF: ubiquitin_1ECOD (1.6)
Oubiquitin_1e7npiO1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Ubiquitin-likeF: ubiquitin_1ECOD (1.6)
OA [auth o]ubiquitin_1e7npio1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Ubiquitin-likeF: ubiquitin_1ECOD (1.6)
Pubiquitin_1e7npiP1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Ubiquitin-likeF: ubiquitin_1ECOD (1.6)
PA [auth p]ubiquitin_1e7npip1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Ubiquitin-likeF: ubiquitin_1ECOD (1.6)
Qubiquitin_1e7npiQ1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Ubiquitin-likeF: ubiquitin_1ECOD (1.6)
Rubiquitin_1e7npiR1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Ubiquitin-likeF: ubiquitin_1ECOD (1.6)
Tubiquitin_1e7npiT1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Ubiquitin-likeF: ubiquitin_1ECOD (1.6)
Uubiquitin_1e7npiU1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Ubiquitin-likeF: ubiquitin_1ECOD (1.6)
Vubiquitin_1e7npiV1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Ubiquitin-likeF: ubiquitin_1ECOD (1.6)
Wubiquitin_1e7npiW1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Ubiquitin-likeF: ubiquitin_1ECOD (1.6)
Xubiquitin_1e7npiX1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Ubiquitin-likeF: ubiquitin_1ECOD (1.6)
Zubiquitin_1e7npiZ1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Ubiquitin-likeF: ubiquitin_1ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF04424MINDY deubiquitinase (MINDY_DUB)MINDY deubiquitinase- Family
PF00240Ubiquitin family (ubiquitin)Ubiquitin familyThis family contains a number of ubiquitin-like proteins: SUMO (smt3 homologue) (see Swiss:Q02724), Nedd8 (see Swiss:P29595), Elongin B (see Swiss:Q15370), Rub1 (see Swiss:Q9SHE7), and Parkin (see Swiss:O60260). A number of them are thought to carry ...This family contains a number of ubiquitin-like proteins: SUMO (smt3 homologue) (see Swiss:Q02724), Nedd8 (see Swiss:P29595), Elongin B (see Swiss:Q15370), Rub1 (see Swiss:Q9SHE7), and Parkin (see Swiss:O60260). A number of them are thought to carry a distinctive five-residue motif termed the proteasome-interacting motif (PIM), which may have a biologically significant role in protein delivery to proteasomes and recruitment of proteasomes to transcription sites [5].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Ubiquitin carboxyl-terminal hydrolase MINDY-2
Polyubiquitin-C

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR007518MINDY deubiquitinaseFamily
IPR033979MINDY deubiquitinase domainDomain
IPR019954Ubiquitin conserved siteConserved Site
IPR000626Ubiquitin-like domainDomain
IPR019956Ubiquitin domainDomain
IPR050158Ubiquitin and ubiquitin-likeFamily
IPR029071Ubiquitin-like domain superfamilyHomologous Superfamily