Crystal structure of ligand free open conformation of sulfoquinovosyl binding protein (SQBP) from Agrobacterium tumefaciens
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | Sybindin | e7nbzB1 | A: beta barrels | X: Nuclear receptor ligand-binding domain | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Sybindin | ECOD (v294.2) |
| C | Peptidase_M4,Peptidase_M4_C | e7nbzC1 | A: beta barrels | X: Nuclear receptor ligand-binding domain | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Peptidase_M4,Peptidase_M4_C | ECOD (v294.2) |
| A | Sybindin | e7nbzA1 | A: beta barrels | X: Nuclear receptor ligand-binding domain | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Sybindin | ECOD (v294.2) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF01547 | Bacterial extracellular solute-binding protein (SBP_bac_1) | Bacterial extracellular solute-binding protein | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| Sulfoquinovosyl binding protein | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR050490 | Bacterial solute-binding protein 1 | Family | |
| IPR006059 | Bacterial-type extracellular solute-binding protein | Family |
