7MYJ
Structure of full length human AMPK (a2b1g1) in complex with a small molecule activator MSG011
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF16579 | e7myjA1 | A: a+b two layers | X: TBP-like | H: Kinase associated domain 1, KA1 (From Topology) | T: Kinase associated domain 1, KA1 | F: PF16579 | ECOD (1.6) |
A | PF00069 | e7myjA2 | A: a+b complex topology | X: Protein kinase/SAICAR synthase/ATP-grasp (From Homology) | H: Protein kinase/SAICAR synthase/ATP-grasp | T: Protein kinase | F: PF00069 | ECOD (1.6) |
C | PF16579 | e7myjC2 | A: a+b two layers | X: TBP-like | H: Kinase associated domain 1, KA1 (From Topology) | T: Kinase associated domain 1, KA1 | F: PF16579 | ECOD (1.6) |
C | PF00069 | e7myjC1 | A: a+b complex topology | X: Protein kinase/SAICAR synthase/ATP-grasp (From Homology) | H: Protein kinase/SAICAR synthase/ATP-grasp | T: Protein kinase | F: PF00069 | ECOD (1.6) |
B | PF16561 | e7myjB2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF16561 | ECOD (1.6) |
B | PF04739 | e7myjB1 | A: a+b two layers | X: AMPKBI-like (From Topology) | H: AMPKBI-like (From Topology) | T: AMPKBI-like | F: PF04739 | ECOD (1.6) |
D | PF16561 | e7myjD1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF16561 | ECOD (1.6) |
D | PF04739 | e7myjD2 | A: a+b two layers | X: AMPKBI-like (From Topology) | H: AMPKBI-like (From Topology) | T: AMPKBI-like | F: PF04739 | ECOD (1.6) |
E | PF00571 | e7myjE2 | A: a+b duplicates or obligate multimers | X: CBS-domain (From Topology) | H: CBS-domain (From Topology) | T: CBS-domain | F: PF00571 | ECOD (1.6) |
F | PF00571 | e7myjF2 | A: a+b duplicates or obligate multimers | X: CBS-domain (From Topology) | H: CBS-domain (From Topology) | T: CBS-domain | F: PF00571 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF21147 | AMP-activated protein kinase, alpha subunit, autoinhibitory domain (AMPK_alpha_AID) | AMP-activated protein kinase, alpha subunit, autoinhibitory domain | This domain is found in the catalytic subunit (alpha) of the enzymatic complex AMP-activated protein kinase (AMPK). This protein is organised into an N-terminal kinase domain (KD, Pfam:PF00069) and a regulatory C-terminus, which contains an autoinhib ... | Domain | |
PF16579 | Adenylate sensor of SNF1-like protein kinase (AdenylateSensor) | Adenylate sensor of SNF1-like protein kinase | AdenylateSensor is a family found at the C-terminus of SNF1-like protein kinases snf other protein-kinases [1]. | Domain | |
PF00069 | Protein kinase domain (Pkinase) | Protein kinase domain | - | Domain | |
PF04739 | 5'-AMP-activated protein kinase beta subunit, interaction domain (AMPKBI) | 5'-AMP-activated protein kinase beta subunit, interaction domain | - | Family | |
PF16561 | Glycogen recognition site of AMP-activated protein kinase (AMPK1_CBM) | Glycogen recognition site of AMP-activated protein kinase | - | Family | |
PF00571 | CBS domain (CBS) | CBS domain | CBS domains are small intracellular modules that pair together to form a stable globular domain [2]. This family represents a single CBS domain. Pairs of these domains have been termed a Bateman domain [6]. CBS domains have been shown to bind ligands ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR000719 | Protein kinase domain | Domain | |
IPR028375 | KA1 domain/Ssp2, C-terminal | Homologous Superfamily | |
IPR049020 | PRKAA1/2, autoinhibitory domain | Domain | |
IPR017441 | Protein kinase, ATP binding site | Binding Site | |
IPR039148 | 5'-AMP-activated protein kinase catalytic subunit alpha-2, C-terminal | Domain | |
IPR032270 | AMPK, C-terminal adenylate sensor domain | Domain | |
IPR028783 | PRKAA2, UBA-like autoinhibitory domain | Domain | |
IPR011009 | Protein kinase-like domain superfamily | Homologous Superfamily | |
IPR008271 | Serine/threonine-protein kinase, active site | Active Site | |
IPR032640 | AMP-activated protein kinase, glycogen-binding domain | Domain | |
IPR037256 | ASC domain superfamily | Homologous Superfamily | |
IPR006828 | Association with the SNF1 complex (ASC) domain | Domain | |
IPR013783 | Immunoglobulin-like fold | Homologous Superfamily | |
IPR014756 | Immunoglobulin E-set | Homologous Superfamily | |
IPR046342 | CBS domain superfamily | Homologous Superfamily | |
IPR000644 | CBS domain | Domain |