7MUQ | pdb_00007muq

Reconstruction of the Legionella pneumophila Dot/Icm T4SS 3DVA Map 1


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
DE [auth BK]SCOP2B SuperfamilyOmpA-like 8098176 3001650 SCOP2B (2022-06-29)
DG [auth FK]SCOP2B SuperfamilyOmpA-like 8098176 3001650 SCOP2B (2022-06-29)
GC [auth AK]SCOP2B SuperfamilyOmpA-like 8098176 3001650 SCOP2B (2022-06-29)
I [auth GK]SCOP2B SuperfamilyOmpA-like 8098176 3001650 SCOP2B (2022-06-29)
JA [auth IK]SCOP2B SuperfamilyOmpA-like 8098176 3001650 SCOP2B (2022-06-29)
LB [auth KK]SCOP2B SuperfamilyOmpA-like 8098176 3001650 SCOP2B (2022-06-29)
NC [auth MK]SCOP2B SuperfamilyOmpA-like 8098176 3001650 SCOP2B (2022-06-29)
RF [auth EK]SCOP2B SuperfamilyOmpA-like 8098176 3001650 SCOP2B (2022-06-29)
V [auth HK]SCOP2B SuperfamilyOmpA-like 8098176 3001650 SCOP2B (2022-06-29)
WA [auth JK]SCOP2B SuperfamilyOmpA-like 8098176 3001650 SCOP2B (2022-06-29)
WE [auth CK]SCOP2B SuperfamilyOmpA-like 8098176 3001650 SCOP2B (2022-06-29)
XB [auth LK]SCOP2B SuperfamilyOmpA-like 8098176 3001650 SCOP2B (2022-06-29)
IF [auth DK]SCOP2B SuperfamilyOmpA-like 8098176 3001650 SCOP2B (2022-06-29)
GE [auth BL]SCOP2B SuperfamilyOmpA-like 8074167 3001650 SCOP2B (2022-06-29)
J [auth GL]SCOP2B SuperfamilyOmpA-like 8074167 3001650 SCOP2B (2022-06-29)
JF [auth DL]SCOP2B SuperfamilyOmpA-like 8074167 3001650 SCOP2B (2022-06-29)
KA [auth IL]SCOP2B SuperfamilyOmpA-like 8074167 3001650 SCOP2B (2022-06-29)
KD [auth AL]SCOP2B SuperfamilyOmpA-like 8074167 3001650 SCOP2B (2022-06-29)
MB [auth KL]SCOP2B SuperfamilyOmpA-like 8074167 3001650 SCOP2B (2022-06-29)
OG [auth FL]SCOP2B SuperfamilyOmpA-like 8074167 3001650 SCOP2B (2022-06-29)
W [auth HL]SCOP2B SuperfamilyOmpA-like 8074167 3001650 SCOP2B (2022-06-29)
XA [auth JL]SCOP2B SuperfamilyOmpA-like 8074167 3001650 SCOP2B (2022-06-29)
YB [auth LL]SCOP2B SuperfamilyOmpA-like 8074167 3001650 SCOP2B (2022-06-29)
XE [auth CL]SCOP2B SuperfamilyOmpA-like 8074167 3001650 SCOP2B (2022-06-29)
SF [auth EL]SCOP2B SuperfamilyOmpA-like 8074167 3001650 SCOP2B (2022-06-29)
OC [auth ML]SCOP2B SuperfamilyOmpA-like 8074167 3001650 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AE [auth BD]AAA_lid_RFC1e7muqBD1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: AAA_lid_RFC1ECOD (v295)
CA [auth Hd]AAA_lid_RFC1e7muqHd1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: AAA_lid_RFC1ECOD (v295)
CDAAA_lid_RFC1e7muqCD1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: AAA_lid_RFC1ECOD (v295)
CF [auth Cd]AAA_lid_RFC1e7muqCd1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: AAA_lid_RFC1ECOD (v295)
DB [auth Jd]AAA_lid_RFC1e7muqJd1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: AAA_lid_RFC1ECOD (v295)
E [auth GD]AAA_lid_RFC1e7muqGD1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: AAA_lid_RFC1ECOD (v295)
EC [auth Ld]AAA_lid_RFC1e7muqLd1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: AAA_lid_RFC1ECOD (v295)
EF [auth DD]AAA_lid_RFC1e7muqDD1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: AAA_lid_RFC1ECOD (v295)
FA [auth ID]AAA_lid_RFC1e7muqID1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: AAA_lid_RFC1ECOD (v295)
GB [auth KD]AAA_lid_RFC1e7muqKD1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: AAA_lid_RFC1ECOD (v295)
HC [auth MD]AAA_lid_RFC1e7muqMD1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: AAA_lid_RFC1ECOD (v295)
LE [auth Bd]AAA_lid_RFC1e7muqBd1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: AAA_lid_RFC1ECOD (v295)
O [auth Gd]AAA_lid_RFC1e7muqGd1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: AAA_lid_RFC1ECOD (v295)
OE [auth AD]AAA_lid_RFC1e7muqAD1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: AAA_lid_RFC1ECOD (v295)
PA [auth Dd]AAA_lid_RFC1e7muqDd1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: AAA_lid_RFC1ECOD (v295)
Q [auth HD]AAA_lid_RFC1e7muqHD1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: AAA_lid_RFC1ECOD (v295)
RB [auth Kd]AAA_lid_RFC1e7muqKd1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: AAA_lid_RFC1ECOD (v295)
SA [auth JD]AAA_lid_RFC1e7muqJD1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: AAA_lid_RFC1ECOD (v295)
TB [auth LD]AAA_lid_RFC1e7muqLD1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: AAA_lid_RFC1ECOD (v295)
TC [auth Md]AAA_lid_RFC1e7muqMd1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: AAA_lid_RFC1ECOD (v295)
UG [auth Fd]AAA_lid_RFC1e7muqFd1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: AAA_lid_RFC1ECOD (v295)
YD [auth Ad]AAA_lid_RFC1e7muqAd1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: AAA_lid_RFC1ECOD (v295)
ZF [auth FD]AAA_lid_RFC1e7muqFD1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: AAA_lid_RFC1ECOD (v295)
XF [auth Ed]AAA_lid_RFC1e7muqEd1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: AAA_lid_RFC1ECOD (v295)
QA [auth Id]AAA_lid_RFC1e7muqId1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: AAA_lid_RFC1ECOD (v295)
NF [auth ED]AAA_lid_RFC1e7muqED1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: AAA_lid_RFC1ECOD (v295)
DE [auth BK]Glyco_transf_41e7muqBK1 A: alpha arraysX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Glyco_transf_41ECOD (v295)
DG [auth FK]Secretin_Ne7muqFK1 A: alpha arraysX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v295)
GC [auth AK]Secretin_Ne7muqAK1 A: alpha arraysX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v295)
I [auth GK]Secretin_Ne7muqGK1 A: alpha arraysX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v295)
JA [auth IK]Secretin_Ne7muqIK1 A: alpha arraysX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v295)
LB [auth KK]Secretin_Ne7muqKK1 A: alpha arraysX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v295)
NC [auth MK]Secretin_Ne7muqMK1 A: alpha arraysX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v295)
RF [auth EK]Secretin_Ne7muqEK1 A: alpha arraysX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v295)
V [auth HK]Glyco_transf_41e7muqHK1 A: alpha arraysX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Glyco_transf_41ECOD (v295)
WA [auth JK]Secretin_Ne7muqJK1 A: alpha arraysX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v295)
WE [auth CK]Secretin_Ne7muqCK1 A: alpha arraysX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v295)
XB [auth LK]Secretin_Ne7muqLK1 A: alpha arraysX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v295)
IF [auth DK]Secretin_Ne7muqDK1 A: alpha arraysX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v295)
GE [auth BL]Secretin_Ne7muqBL1 A: alpha arraysX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v295)
J [auth GL]Secretin_Ne7muqGL1 A: alpha arraysX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v295)
JF [auth DL]Secretin_Ne7muqDL1 A: alpha arraysX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v295)
KA [auth IL]Secretin_Ne7muqIL1 A: alpha arraysX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v295)
KD [auth AL]Secretin_Ne7muqAL1 A: alpha arraysX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v295)
MB [auth KL]Secretin_Ne7muqKL1 A: alpha arraysX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v295)
OG [auth FL]Secretin_Ne7muqFL1 A: alpha arraysX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v295)
W [auth HL]Secretin_Ne7muqHL1 A: alpha arraysX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v295)
XA [auth JL]Secretin_Ne7muqJL1 A: alpha arraysX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v295)
YB [auth LL]Secretin_Ne7muqLL1 A: alpha arraysX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v295)
XE [auth CL]Secretin_Ne7muqCL1 A: alpha arraysX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v295)
SF [auth EL]Secretin_Ne7muqEL1 A: alpha arraysX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v295)
OC [auth ML]Secretin_Ne7muqML1 A: alpha arraysX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v295)
A [auth AG]Secretin_Ne7muqAG1 A: alpha arraysX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v295)
AD [auth WG]AAA_lid_RFC1e7muqWG1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: AAA_lid_RFC1ECOD (v295)
BA [auth BG]Secretin_Ne7muqBG1 A: alpha arraysX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v295)
BG [auth Fg]AAA_lid_RFC1e7muqFg1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: AAA_lid_RFC1ECOD (v295)
CB [auth CG]Secretin_Ne7muqCG1 A: alpha arraysX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v295)
EG [auth HG]Secretin_Ne7muqHG1 A: alpha arraysX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v295)
FG [auth IG]Secretin_Ne7muqIG1 A: alpha arraysX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v295)
G [auth Gg]AAA_lid_RFC1e7muqGg1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: AAA_lid_RFC1ECOD (v295)
GD [auth XG]AAA_lid_RFC1e7muqXG1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: AAA_lid_RFC1ECOD (v295)
GF [auth GG]Secretin_Ne7muqGG1 A: alpha arraysX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v295)
GG [auth JG]Secretin_Ne7muqJG1 A: alpha arraysX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v295)
HA [auth Ig]AAA_lid_RFC1e7muqIg1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: AAA_lid_RFC1ECOD (v295)
HG [auth KG]Secretin_Ne7muqKG1 A: alpha arraysX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v295)
IG [auth LG]Secretin_Ne7muqLG1 A: alpha arraysX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v295)
JB [auth Kg]AAA_lid_RFC1e7muqKg1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: AAA_lid_RFC1ECOD (v295)
JC [auth Cg]AAA_lid_RFC1e7muqCg1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: AAA_lid_RFC1ECOD (v295)
JG [auth MG]Secretin_Ne7muqMG1 A: alpha arraysX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v295)
KC [auth Mg]AAA_lid_RFC1e7muqMg1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: AAA_lid_RFC1ECOD (v295)
KG [auth NG]Secretin_Ne7muqNG1 A: alpha arraysX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v295)
LD [auth YG]AAA_lid_RFC1e7muqYG1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: AAA_lid_RFC1ECOD (v295)
LG [auth OG]Secretin_Ne7muqOG1 A: alpha arraysX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v295)
MG [auth PG]Secretin_Ne7muqPG1 A: alpha arraysX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v295)
NE [auth Dg]AAA_lid_RFC1e7muqDg1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: AAA_lid_RFC1ECOD (v295)
PF [auth Eg]AAA_lid_RFC1e7muqEg1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: AAA_lid_RFC1ECOD (v295)
T [auth Hg]AAA_lid_RFC1e7muqHg1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: AAA_lid_RFC1ECOD (v295)
UA [auth Jg]AAA_lid_RFC1e7muqJg1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: AAA_lid_RFC1ECOD (v295)
VB [auth Lg]AAA_lid_RFC1e7muqLg1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: AAA_lid_RFC1ECOD (v295)
WC [auth VG]AAA_lid_RFC1e7muqVG1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: AAA_lid_RFC1ECOD (v295)
RD [auth ZG]AAA_lid_RFC1e7muqZG1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: AAA_lid_RFC1ECOD (v295)
LC [auth Ag]AAA_lid_RFC1e7muqAg1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: AAA_lid_RFC1ECOD (v295)
FE [auth FG]Secretin_Ne7muqFG1 A: alpha arraysX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v295)
ED [auth EG]Secretin_Ne7muqEG1 A: alpha arraysX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v295)
EA [auth Bg]AAA_lid_RFC1e7muqBg1 A: alpha arraysX: HTHH: HTHT: Three-helical HTHF: AAA_lid_RFC1ECOD (v295)
DC [auth DG]Secretin_Ne7muqDG1 A: alpha arraysX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Secretin_NECOD (v295)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
DotD- - -
Type IV secretion protein IcmK---
Inner membrane lipoprotein YiaD- -
Unknown protein fragment---
Unknown protein fragment---
Neurogenic locus notch---
DUF2807 domain-containing protein---
Outer membrane protein, OmpA family protein- -
DotF- - -
DotC- - -
IcmE protein- -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR038140DotD superfamilyHomologous Superfamily
IPR031817DotD proteinFamily
IPR006665OmpA-like domainDomain
IPR050330Bacterial Outer Membrane Structural/FunctionalFamily
IPR036737OmpA-like domain superfamilyHomologous Superfamily
IPR006665OmpA-like domainDomain
IPR027367YMGG-like Gly-zipperDomain
IPR050330Bacterial Outer Membrane Structural/FunctionalFamily
IPR036737OmpA-like domain superfamilyHomologous Superfamily
IPR031618Putative type IV secretory system proteinFamily
IPR053285Thylakoid lumenal pentapeptide repeat proteinFamily
IPR042217Type IV secretion system, VirB10/TrbIHomologous Superfamily
IPR057481Decapeptide repeatRepeat
IPR049855DotG/IcmE-like, C-terminal domainDomain
IPR005498Type IV secretion system, VirB10/TraB/TrbIFamily