7MGE
Structure of C9orf72:SMCR8:WDR41 in complex with ARF1
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
D [auth E] | SCOP2B Superfamily | Ras-like P-loop GTPases | 8089848 | 3002022 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | ANAPC4_WD40_2 | e7mgeA1 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 8-bladed | F: ANAPC4_WD40_2 | ECOD (1.6) |
D [auth E] | Ras | e7mgeE1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: Ras | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF11704 | Vesicle coat protein involved in Golgi to plasma membrane transport (Folliculin) | Vesicle coat protein involved in Golgi to plasma membrane transport | - | Family | |
PF15019 | C9orf72-like protein family (C9orf72-like) | C9orf72-like protein family | - | Family | |
PF00400 | WD domain, G-beta repeat (WD40) | WD domain, G-beta repeat | - | Repeat | |
D [auth E] | PF00025 | ADP-ribosylation factor family (Arf) | ADP-ribosylation factor family | Pfam combines a number of different Prosite families together | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR037520 | Folliculin/SMCR8, longin domain | Domain | |
IPR037521 | Folliculin/SMCR8, tripartite DENN domain | Domain | |
IPR027819 | Guanine nucleotide exchange factor C9orf72 | Family | |
IPR019775 | WD40 repeat, conserved site | Conserved Site | |
IPR036322 | WD40-repeat-containing domain superfamily | Homologous Superfamily | |
IPR040102 | WD repeat-containing protein 41 | Family | |
IPR001680 | WD40 repeat | Repeat | |
IPR020472 | G-protein beta WD-40 repeat | Repeat | |
IPR015943 | WD40/YVTN repeat-like-containing domain superfamily | Homologous Superfamily | |
D [auth E] | IPR045872 | ADP-ribosylation factor 1-5 | Family |
D [auth E] | IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily |
D [auth E] | IPR005225 | Small GTP-binding domain | Domain |
D [auth E] | IPR024156 | Small GTPase superfamily, ARF type | Family |
D [auth E] | IPR006689 | Small GTPase superfamily, ARF/SAR type | Family |