7LYW | pdb_00007lyw

Crystal structure of the HCMV pentamer-specific antibody 2-25

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BF-actin_cap_Ae7lywB1 A: beta barrelsX: DNA methylase specificity domainH: BromodomainT: BromodomainF: F-actin_cap_AECOD (v294.2)
DUtp12e7lywD1 A: beta barrelsX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: Utp12ECOD (v294.2)
F [auth L]Utp12e7lywL1 A: beta barrelsX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: Utp12ECOD (v294.2)
AF-actin_cap_Ae7lywA1 A: beta barrelsX: DNA methylase specificity domainH: BromodomainT: BromodomainF: F-actin_cap_AECOD (v294.2)
E [auth H]Utp12e7lywH1 A: beta barrelsX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: Utp12ECOD (v294.2)
CUtp12e7lywC1 A: beta barrelsX: CNF1/YfiH-like putative cysteine hydrolasesH: RIFT-relatedT: FMN-binding split barrel 2F: Utp12ECOD (v294.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (utative)
D2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (utative)
F [auth L]2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (utative)

SAbDab Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
B,
D,
F [auth L]		Light ChainIGLV3 Lambda-SAbDab (2026-05-15)
A,
C,
E [auth H]		Heavy ChainIGHV1 --SAbDab (2026-05-15)

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
A,
C,
E [auth H]		PCA Parent Component: GLN

:  AA0031

:  2-pyrrolidone-5-carboxylic acid (Gln) MOD:00040 , 2-pyrrolidone-5-carboxylic acid (Glu) MOD:00420