Structure of apo-CDD-1 beta-lactamase in imidazole and MPD
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | d7lnoa_ | Multi-domain proteins (alpha and beta) | beta-lactamase/transpeptidase-like | beta-lactamase/transpeptidase-like | automated matches | automated matches | (Clostridioides difficile ) [TaxId: 1496 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | Ribosomal_L12_N | e7lnoA1 | A: alpha arrays | X: putative RnfG subunit of electron transport complex | H: putative RnfG subunit of electron transport complex | T: Aspartate/ornithine carbamoyltransferase | F: Ribosomal_L12_N | ECOD (v295.2) |
AMR Gene: CARD Annotation CARD Database Homepage
| Chains | Accession | Short Name | Description | Provenance Source (Version) |
|---|---|---|---|---|
| ARO:3006904 | CDD-1 | CDD-1 is a CDD beta-lactamase. | CARD (4.0.2) |
AMR Gene Family: CARD Annotation CARD Database Homepage
| Chains | Accession | Gene Family | Drug Class | Resistance Machanism | Provenance Source (Version) |
|---|---|---|---|---|---|
| ARO:3005396 | CDD beta-lactamase | carbapenem | antibiotic inactivation | CARD (4.0.2) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR012338 | Beta-lactamase/transpeptidase-like | Homologous Superfamily | |
| IPR001460 | Penicillin-binding protein, transpeptidase | Domain | |
| IPR002137 | Beta-lactamase, class-D active site | Active Site | |
| IPR050515 | Class D beta-lactamase/transpeptidase | Family |














