Annotations: 7LB6

PDX1.2/PDX1.3 co-expression complex

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
X	SCOP2B Superfamily	Ribulose-phoshate binding barrel	8085962	3000216	SCOP2B (2022-06-29)
W	SCOP2B Superfamily	Ribulose-phoshate binding barrel	8085962	3000216	SCOP2B (2022-06-29)
V	SCOP2B Superfamily	Ribulose-phoshate binding barrel	8085962	3000216	SCOP2B (2022-06-29)
U	SCOP2B Superfamily	Ribulose-phoshate binding barrel	8085962	3000216	SCOP2B (2022-06-29)
T	SCOP2B Superfamily	Ribulose-phoshate binding barrel	8085962	3000216	SCOP2B (2022-06-29)
S	SCOP2B Superfamily	Ribulose-phoshate binding barrel	8085962	3000216	SCOP2B (2022-06-29)
R	SCOP2B Superfamily	Ribulose-phoshate binding barrel	8085962	3000216	SCOP2B (2022-06-29)
Q	SCOP2B Superfamily	Ribulose-phoshate binding barrel	8085962	3000216	SCOP2B (2022-06-29)
P	SCOP2B Superfamily	Ribulose-phoshate binding barrel	8085962	3000216	SCOP2B (2022-06-29)
O	SCOP2B Superfamily	Ribulose-phoshate binding barrel	8085962	3000216	SCOP2B (2022-06-29)
N	SCOP2B Superfamily	Ribulose-phoshate binding barrel	8085962	3000216	SCOP2B (2022-06-29)
M	SCOP2B Superfamily	Ribulose-phoshate binding barrel	8085962	3000216	SCOP2B (2022-06-29)
L	SCOP2B Superfamily	Ribulose-phoshate binding barrel	8095361	3000216	SCOP2B (2022-06-29)
K	SCOP2B Superfamily	Ribulose-phoshate binding barrel	8095361	3000216	SCOP2B (2022-06-29)
J	SCOP2B Superfamily	Ribulose-phoshate binding barrel	8095361	3000216	SCOP2B (2022-06-29)
I	SCOP2B Superfamily	Ribulose-phoshate binding barrel	8095361	3000216	SCOP2B (2022-06-29)
H	SCOP2B Superfamily	Ribulose-phoshate binding barrel	8095361	3000216	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	Ribulose-phoshate binding barrel	8095361	3000216	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	Ribulose-phoshate binding barrel	8095361	3000216	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	Ribulose-phoshate binding barrel	8095361	3000216	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Ribulose-phoshate binding barrel	8095361	3000216	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Ribulose-phoshate binding barrel	8095361	3000216	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Ribulose-phoshate binding barrel	8095361	3000216	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Ribulose-phoshate binding barrel	8095361	3000216	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
X	Utp12	e7lb6X1	A: beta barrels	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Utp12	ECOD (v294.2)
W	Utp12	e7lb6W1	A: beta barrels	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Utp12	ECOD (v294.2)
V	Utp12	e7lb6V1	A: beta barrels	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Utp12	ECOD (v294.2)
U	Utp12	e7lb6U1	A: beta barrels	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Utp12	ECOD (v294.2)
T	Utp12	e7lb6T1	A: beta barrels	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Utp12	ECOD (v294.2)
S	Utp12	e7lb6S1	A: beta barrels	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Utp12	ECOD (v294.2)
R	Utp12	e7lb6R1	A: beta barrels	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Utp12	ECOD (v294.2)
Q	Utp12	e7lb6Q1	A: beta barrels	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Utp12	ECOD (v294.2)
P	Utp12	e7lb6P1	A: beta barrels	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Utp12	ECOD (v294.2)
O	Utp12	e7lb6O1	A: beta barrels	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Utp12	ECOD (v294.2)
N	Utp12	e7lb6N1	A: beta barrels	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Utp12	ECOD (v294.2)
M	Utp12	e7lb6M1	A: beta barrels	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Utp12	ECOD (v294.2)
L	Utp12	e7lb6L1	A: beta barrels	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Utp12	ECOD (v294.2)
K	Utp12	e7lb6K1	A: beta barrels	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Utp12	ECOD (v294.2)
J	Utp12	e7lb6J1	A: beta barrels	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Utp12	ECOD (v294.2)
I	Utp12	e7lb6I1	A: beta barrels	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Utp12	ECOD (v294.2)
H	Utp12	e7lb6H1	A: beta barrels	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Utp12	ECOD (v294.2)
G	Utp12	e7lb6G1	A: beta barrels	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Utp12	ECOD (v294.2)
F	Utp12	e7lb6F1	A: beta barrels	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Utp12	ECOD (v294.2)
E	Utp12	e7lb6E1	A: beta barrels	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Utp12	ECOD (v294.2)
D	Utp12	e7lb6D1	A: beta barrels	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Utp12	ECOD (v294.2)
C	Utp12	e7lb6C1	A: beta barrels	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Utp12	ECOD (v294.2)
B	Utp12	e7lb6B1	A: beta barrels	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Utp12	ECOD (v294.2)
A	Utp12	e7lb6A1	A: beta barrels	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Utp12	ECOD (v294.2)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
M, N, O, P, Q M, N, O, P, Q, R, S, T, U, V, W, X	PF01680	SOR/SNZ family (SOR_SNZ)	SOR/SNZ family	Members of this family are enzymes involved in a new pathway of pyridoxine/pyridoxal 5-phosphate biosynthesis [1]. This family was formerly known as UPF0019.	Domain
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	PF01680	SOR/SNZ family (SOR_SNZ)	SOR/SNZ family	Members of this family are enzymes involved in a new pathway of pyridoxine/pyridoxal 5-phosphate biosynthesis [1]. This family was formerly known as UPF0019.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
M, N, O, P, Q M, N, O, P, Q, R, S, T, U, V, W, X	Pyridoxal 5'-phosphate synthase subunit PDX1.3	identical protein binding protein binding binding protein homodimerization activity protein dimerization activity amine-lyase activity lyase activity pyridoxal 5'-phosphate synthase (glutamine hydrolysing) activity catalytic activity carbon-nitrogen lyase activity protein heterodimerization activity	pyridoxal 5'-phosphate biosynthetic process vitamin B6 biosynthetic process water-soluble vitamin biosynthetic process small molecule biosynthetic process pyridine-containing compound biosynthetic process vitamin biosynthetic process aldehyde biosynthetic process aldehyde metabolic process vitamin metabolic process biosynthetic process organophosphate metabolic process organophosphate biosynthetic process phosphate-containing compound metabolic process pyridine-containing compound metabolic process pyridoxal 5'-phosphate biosynthetic process vitamin B6 biosynthetic process water-soluble vitamin biosynthetic process small molecule biosynthetic process pyridine-containing compound biosynthetic process vitamin biosynthetic process aldehyde biosynthetic process aldehyde metabolic process vitamin metabolic process biosynthetic process organophosphate metabolic process organophosphate biosynthetic process phosphate-containing compound metabolic process pyridine-containing compound metabolic process metabolic process cellular process vitamin B6 metabolic process small molecule metabolic process pyridoxal 5'-phosphate metabolic process phosphorus metabolic process tetrapyrrole metabolic process chlorophyll metabolic process porphyrin-containing compound metabolic process response to light stimulus response to stimulus response to radiation response to abiotic stimulus response to UV response to UV-B response to oxidative stress response to lipid response to stress response to chemical response to oxygen-containing compound response to lipid hydroperoxide response to hydroperoxide pyridoxine biosynthetic process pyridoxine metabolic process response to osmotic stress hyperosmotic response response to salt stress hyperosmotic salinity response amino acid metabolic process primary metabolic process response to non-ionic osmotic stress	cellular anatomical structure endomembrane system intracellular anatomical structure cytoplasm cytosol cell periphery plasma membrane membrane
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	Pyridoxal 5'-phosphate synthase-like subunit PDX1.2	protein heterodimerization activity protein binding binding protein dimerization activity amine-lyase activity lyase activity catalytic activity carbon-nitrogen lyase activity	pyridoxal 5'-phosphate biosynthetic process vitamin B6 biosynthetic process water-soluble vitamin biosynthetic process small molecule biosynthetic process pyridine-containing compound biosynthetic process vitamin biosynthetic process aldehyde biosynthetic process aldehyde metabolic process vitamin metabolic process biosynthetic process organophosphate metabolic process organophosphate biosynthetic process phosphate-containing compound metabolic process pyridine-containing compound metabolic process pyridoxal 5'-phosphate biosynthetic process vitamin B6 biosynthetic process water-soluble vitamin biosynthetic process small molecule biosynthetic process pyridine-containing compound biosynthetic process vitamin biosynthetic process aldehyde biosynthetic process aldehyde metabolic process vitamin metabolic process biosynthetic process organophosphate metabolic process organophosphate biosynthetic process phosphate-containing compound metabolic process pyridine-containing compound metabolic process metabolic process cellular process vitamin B6 metabolic process small molecule metabolic process pyridoxal 5'-phosphate metabolic process phosphorus metabolic process pyridoxine biosynthetic process pyridoxine metabolic process amino acid metabolic process primary metabolic process	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
M, N, O, P, Q M, N, O, P, Q, R, S, T, U, V, W, X	IPR001852	Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ	Family
M, N, O, P, Q M, N, O, P, Q, R, S, T, U, V, W, X	IPR013785	Aldolase-type TIM barrel	Homologous Superfamily
M, N, O, P, Q M, N, O, P, Q, R, S, T, U, V, W, X	IPR033755	PdxS/SNZ N-terminal domain	Domain
M, N, O, P, Q M, N, O, P, Q, R, S, T, U, V, W, X	IPR011060	Ribulose-phosphate binding barrel	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR011060	Ribulose-phosphate binding barrel	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR001852	Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ	Family
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR013785	Aldolase-type TIM barrel	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L	IPR033755	PdxS/SNZ N-terminal domain	Domain