7L9P
Structure of human SHLD2-SHLD3-REV7-TRIP13(E253Q) complex
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
G | SCOP2B Superfamily | HORMA/p31comet-like | 8058134 | 3000150 | SCOP2B (2022-06-29) |
H [auth I] | SCOP2B Superfamily | HORMA/p31comet-like | 8058134 | 3000150 | SCOP2B (2022-06-29) |
I [auth J] | SCOP2B Superfamily | HORMA/p31comet-like | 8058134 | 3000150 | SCOP2B (2022-06-29) |
J [auth K] | SCOP2B Superfamily | HORMA/p31comet-like | 8058134 | 3000150 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
G | HORMA | e7l9pG1 | A: a+b two layers | X: The spindle assembly checkpoint protein mad2 (From Topology) | H: The spindle assembly checkpoint protein mad2 (From Topology) | T: The spindle assembly checkpoint protein mad2 | F: HORMA | ECOD (1.6) |
H [auth I] | HORMA | e7l9pI1 | A: a+b two layers | X: The spindle assembly checkpoint protein mad2 (From Topology) | H: The spindle assembly checkpoint protein mad2 (From Topology) | T: The spindle assembly checkpoint protein mad2 | F: HORMA | ECOD (1.6) |
I [auth J] | HORMA | e7l9pJ1 | A: a+b two layers | X: The spindle assembly checkpoint protein mad2 (From Topology) | H: The spindle assembly checkpoint protein mad2 (From Topology) | T: The spindle assembly checkpoint protein mad2 | F: HORMA | ECOD (1.6) |
J [auth K] | HORMA | e7l9pK1 | A: a+b two layers | X: The spindle assembly checkpoint protein mad2 (From Topology) | H: The spindle assembly checkpoint protein mad2 (From Topology) | T: The spindle assembly checkpoint protein mad2 | F: HORMA | ECOD (1.6) |
A | KOG0744_C | e7l9pA2 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: KOG0744_C | ECOD (1.6) |
A | Sigma54_activat | e7l9pA1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: Sigma54_activat | ECOD (1.6) |
B | KOG0744_C | e7l9pB1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: KOG0744_C | ECOD (1.6) |
B | F_UNCLASSIFIED | e7l9pB3 | A: a+b two layers | X: Cdc48 domain 2-like (From Topology) | H: Cdc48 domain 2-like (From Topology) | T: Cdc48 domain 2-like | F: F_UNCLASSIFIED | ECOD (1.6) |
B | Sigma54_activat | e7l9pB2 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: Sigma54_activat | ECOD (1.6) |
C | KOG0744_C | e7l9pC2 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: KOG0744_C | ECOD (1.6) |
C | F_UNCLASSIFIED | e7l9pC3 | A: a+b two layers | X: Cdc48 domain 2-like (From Topology) | H: Cdc48 domain 2-like (From Topology) | T: Cdc48 domain 2-like | F: F_UNCLASSIFIED | ECOD (1.6) |
C | Sigma54_activat | e7l9pC1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: Sigma54_activat | ECOD (1.6) |
D | KOG0744_C | e7l9pD3 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: KOG0744_C | ECOD (1.6) |
D | F_UNCLASSIFIED | e7l9pD1 | A: a+b two layers | X: Cdc48 domain 2-like (From Topology) | H: Cdc48 domain 2-like (From Topology) | T: Cdc48 domain 2-like | F: F_UNCLASSIFIED | ECOD (1.6) |
D | Sigma54_activat | e7l9pD2 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: Sigma54_activat | ECOD (1.6) |
E | KOG0744_C | e7l9pE1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: KOG0744_C | ECOD (1.6) |
E | F_UNCLASSIFIED | e7l9pE3 | A: a+b two layers | X: Cdc48 domain 2-like (From Topology) | H: Cdc48 domain 2-like (From Topology) | T: Cdc48 domain 2-like | F: F_UNCLASSIFIED | ECOD (1.6) |
E | Sigma54_activat | e7l9pE2 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: Sigma54_activat | ECOD (1.6) |
F | KOG0744_C | e7l9pF1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: KOG0744_C | ECOD (1.6) |
F | Sigma54_activat | e7l9pF2 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: Sigma54_activat | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
G, H [auth I], I [auth J], J [auth K] | PF02301 | HORMA domain (HORMA) | HORMA domain | The HORMA (for Hop1p, Rev7p and MAD2) domain has been suggested to recognise chromatin states that result from DNA adducts, double stranded breaks or non-attachment to the spindle and acts as an adaptor that recruits other proteins. MAD2 is a spindle ... | Domain |
PF00004 | ATPase family associated with various cellular activities (AAA) (AAA) | ATPase family associated with various cellular activities (AAA) | AAA family proteins often perform chaperone-like functions that assist in the assembly, operation, or disassembly of protein complexes [2]. | Domain | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
G, H [auth I], I [auth J], J [auth K] | IPR045091 | Mad2-like | Family |
G, H [auth I], I [auth J], J [auth K] | IPR036570 | HORMA domain superfamily | Homologous Superfamily |
G, H [auth I], I [auth J], J [auth K] | IPR003511 | HORMA domain | Domain |
IPR003593 | AAA+ ATPase domain | Domain | |
IPR003959 | ATPase, AAA-type, core | Domain | |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily | |
IPR001270 | ClpA/B family | Family | |
IPR003960 | ATPase, AAA-type, conserved site | Conserved Site | |
IPR044539 | Pachytene checkpoint protein 2-like | Family | |
K [auth Y], L [auth X] | IPR029715 | Shieldin complex subunit 2 | Family |
K [auth Y], L [auth X] | IPR031589 | Shieldin complex subunit 2, C-terminal domain | Domain |
K [auth Y], L [auth X] | IPR049507 | Shieldin complex subunit 2, first OB fold domain | Domain |
K [auth Y], L [auth X] | IPR039996 | Shieldin complex subunit 3 | Family |