7KJH
Plasmodium falciparum protein Pf12p bound to nanobody B9
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d7kjha1 | All beta proteins | Immunoglobulin-like beta-sandwich | Immunoglobulin | V set domains (antibody variable domain-like) | automated matches | (Vicugna pacos ) [TaxId: 30538 ], | SCOPe (2.08) |
A | d7kjha3 | Artifacts | Tags | Tags | Tags | C-terminal Tags | (Vicugna pacos ) [TaxId: 30538 ], | SCOPe (2.08) |
A | d7kjha2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Vicugna pacos ) [TaxId: 30538 ], | SCOPe (2.08) |
D [auth B] | d7kjhb1 | All beta proteins | Immunoglobulin-like beta-sandwich | Immunoglobulin | V set domains (antibody variable domain-like) | automated matches | (Vicugna pacos ) [TaxId: 30538 ], | SCOPe (2.08) |
D [auth B] | d7kjhb3 | Artifacts | Tags | Tags | Tags | C-terminal Tags | (Vicugna pacos ) [TaxId: 30538 ], | SCOPe (2.08) |
D [auth B] | d7kjhb2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Vicugna pacos ) [TaxId: 30538 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | V-set_8 | e7kjhA1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set_8 | ECOD (1.6) |
D [auth B] | V-set_8 | e7kjhB1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set_8 | ECOD (1.6) |
B [auth C] | s48_45 | e7kjhC1 | A: beta sandwiches | X: Cupredoxin-like | H: Surface antigen 1 (SAG1)-related-sequence (SRS) family (From Topology) | T: Surface antigen 1 (SAG1)-related-sequence (SRS) family | F: s48_45 | ECOD (1.6) |
C [auth D] | s48_45 | e7kjhD1 | A: beta sandwiches | X: Cupredoxin-like | H: Surface antigen 1 (SAG1)-related-sequence (SRS) family (From Topology) | T: Surface antigen 1 (SAG1)-related-sequence (SRS) family | F: s48_45 | ECOD (1.6) |
SAbDab Antibody Annotation SAbDab Database Homepage
Chain | Chain Class | Chain Subclass | Chain Type | Antigen Name(s) | Provenance Source |
---|---|---|---|---|---|
A, D [auth B] | Heavy Chain | IGHV1 | - | surface protein p12p | SAbDab (2024-10-11) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
B [auth C], C [auth D] | PF07422 | Sexual stage antigen s48/45 domain (s48_45) | Sexual stage antigen s48/45 domain | This family contains sexual stage s48/45 antigens from Plasmodium (approximately 450 residues long). These are surface proteins expressed by Plasmodium male and female gametes that have been shown to play a conserved and important role in fertilisati ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
A, D [auth B] | Nanobody B9 | - | - | - |
B [auth C], C [auth D] | Surface protein P12p | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
B [auth C], C [auth D] | IPR010884 | 6-Cysteine (6-Cys) domain | Domain |
B [auth C], C [auth D] | IPR038160 | 6-Cysteine (6-Cys) domain superfamily | Homologous Superfamily |