7K6V | pdb_00007k6v

Crystal Structure of Virus-like Particles of GII.4 Norovirus Houston virus (HOV)

External Resource: Annotation

Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A [auth AA]	RNA_pol_Rpb1_5	e7k6vAA01	A: beta barrels	X: Histone-like	H: all-alpha NTP pyrophosphatases	T: Hypothetical protein AF_0060	F: RNA_pol_Rpb1_5	ECOD (v294.2)
BA [auth JA]	MIF4G	e7k6vJA1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
D [auth BA]	MIF4G	e7k6vBA1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
DA [auth JC]	MIF4G	e7k6vJC1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
E [auth BB]	MIF4G	e7k6vBB1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
EA [auth KA]	MIF4G	e7k6vKA1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
GA [auth KC]	MIF4G	e7k6vKC1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
H [auth CB]	MIF4G	e7k6vCB1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
IA [auth LB]	MIF4G	e7k6vLB1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
JA [auth LC]	MIF4G	e7k6vLC1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
KA [auth MA]	MIF4G	e7k6vMA1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
LA [auth MB]	MIF4G	e7k6vMB1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
NA	MIF4G	e7k6vNA1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
O [auth EC]	MIF4G	e7k6vEC1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
OA [auth NB]	MIF4G	e7k6vNB1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
PA [auth NC]	MIF4G	e7k6vNC1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
Q [auth FB]	MIF4G	e7k6vFB1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
R [auth FC]	MIF4G	e7k6vFC1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
SA [auth OC]	MIF4G	e7k6vOC1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
V [auth HA]	MIF4G	e7k6vHA1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
X [auth HC]	MIF4G	e7k6vHC1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
Y [auth IA]	MIF4G	e7k6vIA1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
Z [auth IB]	MIF4G	e7k6vIB1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
W [auth HB]	MIF4G	e7k6vHB1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
U [auth GC]	MIF4G	e7k6vGC1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
T [auth GB]	MIF4G	e7k6vGB1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
S [auth GA]	MIF4G	e7k6vGA1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
RA [auth OB]	MIF4G	e7k6vOB1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
QA [auth OA]	MIF4G	e7k6vOA1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
P [auth FA]	MIF4G	e7k6vFA1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
N [auth EB]	MIF4G	e7k6vEB1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
MA [auth MC]	MIF4G	e7k6vMC1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
M [auth EA]	MIF4G	e7k6vEA1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
L [auth DC]	MIF4G	e7k6vDC1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
K [auth DB]	MIF4G	e7k6vDB1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
J [auth DA]	MIF4G	e7k6vDA1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
I [auth CC]	MIF4G	e7k6vCC1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
HA [auth LA]	MIF4G	e7k6vLA1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
G [auth CA]	MIF4G	e7k6vCA1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
FA [auth KB]	MIF4G	e7k6vKB1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
F [auth BC]	MIF4G	e7k6vBC1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
CA [auth JB]	MIF4G	e7k6vJB1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
C [auth AC]	MIF4G	e7k6vAC1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
B [auth AB]	MIF4G	e7k6vAB1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)
AA [auth IC]	MIF4G	e7k6vIC1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: MIF4G	ECOD (v294.2)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth AA], AA [auth IC], B [auth AB], BA [auth JA], C [auth AC], A [auth AA], AA [auth IC], B [auth AB], BA [auth JA], C [auth AC], CA [auth JB], D [auth BA], DA [auth JC], E [auth BB], EA [auth KA], F [auth BC], FA [auth KB], G [auth CA], GA [auth KC], H [auth CB], HA [auth LA], I [auth CC], IA [auth LB], J [auth DA], JA [auth LC], K [auth DB], KA [auth MA], L [auth DC], LA [auth MB], M [auth EA], MA [auth MC], N [auth EB], NA, O [auth EC], OA [auth NB], P [auth FA], PA [auth NC], Q [auth FB], QA [auth OA], R [auth FC], RA [auth OB], S [auth GA], SA [auth OC], T [auth GB], U [auth GC], V [auth HA], W [auth HB], X [auth HC], Y [auth IA], Z [auth IB]	Capsid protein VP1	-	-	virion component host cellular component host intracellular part cellular anatomical structure host cell cytoplasm host cell part host intracellular region other organism part

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth AA], AA [auth IC], B [auth AB], BA [auth JA], C [auth AC], A [auth AA], AA [auth IC], B [auth AB], BA [auth JA], C [auth AC], CA [auth JB], D [auth BA], DA [auth JC], E [auth BB], EA [auth KA], F [auth BC], FA [auth KB], G [auth CA], GA [auth KC], H [auth CB], HA [auth LA], I [auth CC], IA [auth LB], J [auth DA], JA [auth LC], K [auth DB], KA [auth MA], L [auth DC], LA [auth MB], M [auth EA], MA [auth MC], N [auth EB], NA, O [auth EC], OA [auth NB], P [auth FA], PA [auth NC], Q [auth FB], QA [auth OA], R [auth FC], RA [auth OB], S [auth GA], SA [auth OC], T [auth GB], U [auth GC], V [auth HA], W [auth HB], X [auth HC], Y [auth IA], Z [auth IB]	IPR029053	Viral coat protein subunit	Homologous Superfamily
A [auth AA], AA [auth IC], B [auth AB], BA [auth JA], C [auth AC], A [auth AA], AA [auth IC], B [auth AB], BA [auth JA], C [auth AC], CA [auth JB], D [auth BA], DA [auth JC], E [auth BB], EA [auth KA], F [auth BC], FA [auth KB], G [auth CA], GA [auth KC], H [auth CB], HA [auth LA], I [auth CC], IA [auth LB], J [auth DA], JA [auth LC], K [auth DB], KA [auth MA], L [auth DC], LA [auth MB], M [auth EA], MA [auth MC], N [auth EB], NA, O [auth EC], OA [auth NB], P [auth FA], PA [auth NC], Q [auth FB], QA [auth OA], R [auth FC], RA [auth OB], S [auth GA], SA [auth OC], T [auth GB], U [auth GC], V [auth HA], W [auth HB], X [auth HC], Y [auth IA], Z [auth IB]	IPR004005	Calicivirus coat protein	Domain
A [auth AA], AA [auth IC], B [auth AB], BA [auth JA], C [auth AC], A [auth AA], AA [auth IC], B [auth AB], BA [auth JA], C [auth AC], CA [auth JB], D [auth BA], DA [auth JC], E [auth BB], EA [auth KA], F [auth BC], FA [auth KB], G [auth CA], GA [auth KC], H [auth CB], HA [auth LA], I [auth CC], IA [auth LB], J [auth DA], JA [auth LC], K [auth DB], KA [auth MA], L [auth DC], LA [auth MB], M [auth EA], MA [auth MC], N [auth EB], NA, O [auth EC], OA [auth NB], P [auth FA], PA [auth NC], Q [auth FB], QA [auth OA], R [auth FC], RA [auth OB], S [auth GA], SA [auth OC], T [auth GB], U [auth GC], V [auth HA], W [auth HB], X [auth HC], Y [auth IA], Z [auth IB]	IPR013643	Calicivirus coat protein C-terminal	Domain
A [auth AA], AA [auth IC], B [auth AB], BA [auth JA], C [auth AC], A [auth AA], AA [auth IC], B [auth AB], BA [auth JA], C [auth AC], CA [auth JB], D [auth BA], DA [auth JC], E [auth BB], EA [auth KA], F [auth BC], FA [auth KB], G [auth CA], GA [auth KC], H [auth CB], HA [auth LA], I [auth CC], IA [auth LB], J [auth DA], JA [auth LC], K [auth DB], KA [auth MA], L [auth DC], LA [auth MB], M [auth EA], MA [auth MC], N [auth EB], NA, O [auth EC], OA [auth NB], P [auth FA], PA [auth NC], Q [auth FB], QA [auth OA], R [auth FC], RA [auth OB], S [auth GA], SA [auth OC], T [auth GB], U [auth GC], V [auth HA], W [auth HB], X [auth HC], Y [auth IA], Z [auth IB]	IPR033703	Picornavirus/Calicivirus coat protein	Domain

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.