7K66
Structure of Blood Coagulation Factor VIII in Complex with an Anti-C1 Domain Pathogenic Antibody Inhibitor
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF00754 | e7k66A4 | A: beta sandwiches | X: jelly-roll | H: Galactose-binding domain-like (From Topology) | T: Galactose-binding domain-like | F: PF00754 | ECOD (1.6) |
A | F_UNCLASSIFIED | e7k66A7 | A: beta sandwiches | X: Cupredoxin-like | H: Cupredoxin-related (From Topology) | T: Cupredoxin-related | F: F_UNCLASSIFIED | ECOD (1.6) |
A | PF00394 | e7k66A8 | A: beta sandwiches | X: Cupredoxin-like | H: Cupredoxin-related (From Topology) | T: Cupredoxin-related | F: PF00394 | ECOD (1.6) |
A | PF07731 | e7k66A6 | A: beta sandwiches | X: Cupredoxin-like | H: Cupredoxin-related (From Topology) | T: Cupredoxin-related | F: PF07731 | ECOD (1.6) |
A | PF07732 | e7k66A1 | A: beta sandwiches | X: Cupredoxin-like | H: Cupredoxin-related (From Topology) | T: Cupredoxin-related | F: PF07732 | ECOD (1.6) |
B | PF07654 | e7k66B1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07654 | ECOD (1.6) |
B | PF07686 | e7k66B2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07686 | ECOD (1.6) |
C | PF07654 | e7k66C1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07654 | ECOD (1.6) |
C | PF07686 | e7k66C2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07686 | ECOD (1.6) |
IMGT Antibody Annotation IMGT Database Homepage
Chain | Protein Name | Description | Organism Name | Gene Allele Name(s) | Domain Name(s) | Receptor Type | Receptor Description | Provenance Source |
---|---|---|---|---|---|---|---|---|
COAGULATION FACTOR VIII,COAGULATION FACTOR VIII,COAGULATION,B | (F8 (Pr1-391)-F8 (Pr392-759)-F8 (Pr1668-2351)) | Homo sapiens (human) | F8*01 | R-LIKE-DOMAIN F8 (Pr1-391), R-LIKE-DOMAIN F8 (Pr392-759), R-LIKE-DOMAIN F8 (Pr1668-2351) | CPCA | (F8 (Pr1-391)-F8 (Pr392-759)-F8 (Pr1668-2351)) | IMGT (202428-0) | |
house mouse | VH-CH1 | Mus musculus (house mouse) | IGHV9-2-1*01, IGHJ4*01, IGHG2A*01, IGHG2A*02 | V-DOMAIN VH, C-DOMAIN CH1 | IG | FAB-GAMMA-2A_KAPPA | IMGT (202428-0) | |
house mouse | L-KAPPA | Mus musculus (house mouse) | IGKV4-50*01, IGKJ2*03, IGKJ4*01, IGKC*01, IGKC*02 | V-DOMAIN V-KAPPA, C-DOMAIN C-KAPPA | IG | FAB-GAMMA-2A_KAPPA | IMGT (202428-0) |
SAbDab Antibody Annotation SAbDab Database Homepage
Chain | Chain Class | Chain Subclass | Chain Type | Antigen Name(s) | Provenance Source |
---|---|---|---|---|---|
Heavy Chain | IGHV9 | - | coagulation factor viii,coagulation factor viii,coagulationfactor viii,coagulation factor viii | SAbDab (2024-07-12) | |
Light Chain | IGKV4 | Kappa | coagulation factor viii,coagulation factor viii,coagulationfactor viii,coagulation factor viii | SAbDab (2024-07-12) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00754 | F5/8 type C domain (F5_F8_type_C) | F5/8 type C domain | This domain is also known as the discoidin (DS) domain family [1]. | Domain | |
PF00394 | Multicopper oxidase (Cu-oxidase) | Multicopper oxidase | Many of the proteins in this family contain multiple similar copies of this plastocyanin-like domain. | Domain | |
PF07732 | Multicopper oxidase (Cu-oxidase_3) | Multicopper oxidase | This entry contains many divergent copper oxidase-like domains that are not recognised by the Pfam:PF00394 model. | Domain | |
PF07731 | Multicopper oxidase (Cu-oxidase_2) | Multicopper oxidase | This entry contains many divergent copper oxidase-like domains that are not recognised by the Pfam:PF00394 model. | Domain | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR001117 | Multicopper oxidase, second cupredoxin domain | Domain | |
IPR033138 | Multicopper oxidases, conserved site | Conserved Site | |
IPR008979 | Galactose-binding-like domain superfamily | Homologous Superfamily | |
IPR011707 | Multicopper oxidase-like, N-terminal | Domain | |
IPR024715 | Coagulation factor 5/8-like | Family | |
IPR008972 | Cupredoxin | Homologous Superfamily | |
IPR000421 | Coagulation factor 5/8 C-terminal domain | Domain | |
IPR011706 | Multicopper oxidase, C-terminal | Domain | |
IPR033138 | Multicopper oxidases, conserved site | Conserved Site | |
IPR008979 | Galactose-binding-like domain superfamily | Homologous Superfamily | |
IPR011707 | Multicopper oxidase-like, N-terminal | Domain | |
IPR024715 | Coagulation factor 5/8-like | Family | |
IPR008972 | Cupredoxin | Homologous Superfamily | |
IPR000421 | Coagulation factor 5/8 C-terminal domain | Domain | |
IPR011706 | Multicopper oxidase, C-terminal | Domain |
Membrane Protein Annotation: OPM OPM Database Homepage
Chains | External Link | Type | Class | Superfamily | Family |
---|---|---|---|---|---|
OPM | Monotopic/peripheral | All beta monotopic/peripheral | Galactose-binding domain-like | Discoidin domain |