Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
AA [auth a]SCOP2B SuperfamilyDLC-like 8102170 3000821 SCOP2B (2022-06-29)
BA [auth b]SCOP2B SuperfamilyDLC-like 8102170 3000821 SCOP2B (2022-06-29)
CA [auth c]SCOP2B SuperfamilyDLC-like 8102170 3000821 SCOP2B (2022-06-29)
DA [auth d]SCOP2B SuperfamilyDLC-like 8102170 3000821 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
MRIIae7jtkM1 A: alpha duplicates or obligate multimersX: Dimerization-anchoring domain of cAMP-dependent type II PK regulatory subunit (From Topology)H: Dimerization-anchoring domain of cAMP-dependent type II PK regulatory subunit (From Topology)T: Dimerization-anchoring domain of cAMP-dependent type II PK regulatory subunitF: RIIaECOD (1.6)
NRIIae7jtkN1 A: alpha duplicates or obligate multimersX: Dimerization-anchoring domain of cAMP-dependent type II PK regulatory subunit (From Topology)H: Dimerization-anchoring domain of cAMP-dependent type II PK regulatory subunit (From Topology)T: Dimerization-anchoring domain of cAMP-dependent type II PK regulatory subunitF: RIIaECOD (1.6)
LA [auth y]DnaJe7jtky1 A: alpha bundlesX: Chaperone J-domain (From Topology)H: Chaperone J-domain (From Topology)T: Chaperone J-domainF: DnaJECOD (1.6)
MA [auth z]DnaJe7jtkz1 A: alpha bundlesX: Chaperone J-domain (From Topology)H: Chaperone J-domain (From Topology)T: Chaperone J-domainF: DnaJECOD (1.6)
AA [auth a]Dynein_lighte7jtka1 A: a+b two layersX: DLC (From Topology)H: DLC (From Topology)T: DLCF: Dynein_lightECOD (1.6)
BA [auth b]Dynein_lighte7jtkb1 A: a+b two layersX: DLC (From Topology)H: DLC (From Topology)T: DLCF: Dynein_lightECOD (1.6)
CA [auth c]Dynein_lighte7jtkc1 A: a+b two layersX: DLC (From Topology)H: DLC (From Topology)T: DLCF: Dynein_lightECOD (1.6)
DA [auth d]Dynein_lighte7jtkd1 A: a+b two layersX: DLC (From Topology)H: DLC (From Topology)T: DLCF: Dynein_lightECOD (1.6)
FA [auth i]Dpy-30e7jtki2 A: alpha duplicates or obligate multimersX: Dimerization-anchoring domain of cAMP-dependent type II PK regulatory subunit (From Topology)H: Dimerization-anchoring domain of cAMP-dependent type II PK regulatory subunit (From Topology)T: Dimerization-anchoring domain of cAMP-dependent type II PK regulatory subunitF: Dpy-30ECOD (1.6)
FA [auth i]NDKe7jtki1 A: a+b two layersX: Alpha-beta plaitsH: Nucleoside diphosphate kinases (From Topology)T: Nucleoside diphosphate kinasesF: NDKECOD (1.6)
GA [auth j]Dpy-30e7jtkj2 A: alpha duplicates or obligate multimersX: Dimerization-anchoring domain of cAMP-dependent type II PK regulatory subunit (From Topology)H: Dimerization-anchoring domain of cAMP-dependent type II PK regulatory subunit (From Topology)T: Dimerization-anchoring domain of cAMP-dependent type II PK regulatory subunitF: Dpy-30ECOD (1.6)
GA [auth j]NDKe7jtkj1 A: a+b two layersX: Alpha-beta plaitsH: Nucleoside diphosphate kinases (From Topology)T: Nucleoside diphosphate kinasesF: NDKECOD (1.6)
JA [auth u]RIIae7jtku1 A: alpha duplicates or obligate multimersX: Dimerization-anchoring domain of cAMP-dependent type II PK regulatory subunit (From Topology)H: Dimerization-anchoring domain of cAMP-dependent type II PK regulatory subunit (From Topology)T: Dimerization-anchoring domain of cAMP-dependent type II PK regulatory subunitF: RIIaECOD (1.6)
KA [auth v]RIIae7jtkv1 A: alpha duplicates or obligate multimersX: Dimerization-anchoring domain of cAMP-dependent type II PK regulatory subunit (From Topology)H: Dimerization-anchoring domain of cAMP-dependent type II PK regulatory subunit (From Topology)T: Dimerization-anchoring domain of cAMP-dependent type II PK regulatory subunitF: RIIaECOD (1.6)
URIIae7jtkU1 A: alpha duplicates or obligate multimersX: Dimerization-anchoring domain of cAMP-dependent type II PK regulatory subunit (From Topology)H: Dimerization-anchoring domain of cAMP-dependent type II PK regulatory subunit (From Topology)T: Dimerization-anchoring domain of cAMP-dependent type II PK regulatory subunitF: RIIaECOD (1.6)
WPro_isomerasee7jtkW1 A: beta barrelsX: Cyclophilin-like (From Topology)H: Cyclophilin-like (From Topology)T: Cyclophilin-likeF: Pro_isomeraseECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF02493MORN repeat (MORN)MORN repeat- Repeat
A, B
PF01221Dynein light chain type 1 (Dynein_light)Dynein light chain type 1- Domain
C, D
PF05186Dpy-30 motif (Dpy-30)Dpy-30 motif- Motif
C, D
PF01221Dynein light chain type 1 (Dynein_light)Dynein light chain type 1- Domain
G, H
PF04712Radial spokehead-like protein (Radial_spoke)Radial spokehead-like protein- Family
I, J
PF00248Aldo/keto reductase family (Aldo_ket_red)Aldo/keto reductase familyThis family includes a number of K+ ion channel beta chain regulatory domains - these are reported to have oxidoreductase activity [2].Domain
I, J
PF00334Nucleoside diphosphate kinase (NDK)Nucleoside diphosphate kinase- Domain
K, L
PF00173Cytochrome b5-like Heme/Steroid binding domain (Cyt-b5)Cytochrome b5-like Heme/Steroid binding domainThis family includes heme binding domains from a diverse range of proteins. This family also includes proteins that bind to steroids. The family includes progesterone receptors such as Swiss:O00264 [1,2]. Many members of this subfamily are membrane a ...This family includes heme binding domains from a diverse range of proteins. This family also includes proteins that bind to steroids. The family includes progesterone receptors such as Swiss:O00264 [1,2]. Many members of this subfamily are membrane anchored by an N-terminal transmembrane alpha helix. This family also includes a domain in some chitin synthases. There is no known ligand for this domain in the chitin synthases.
Domain
K, L
PF04712Radial spokehead-like protein (Radial_spoke)Radial spokehead-like protein- Family
M, N
PF02197Regulatory subunit of type II PKA R-subunit (RIIa)Regulatory subunit of type II PKA R-subunit- Domain
S, T
PF02493MORN repeat (MORN)MORN repeat- Repeat
LA [auth y],
MA [auth z],
Y,
Z
PF00226DnaJ domain (DnaJ)DnaJ domainDnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are conf ...DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature [2].
Domain
LA [auth y],
MA [auth z],
Y,
Z
PF01556DnaJ C terminal domain (DnaJ_C)DnaJ C terminal domainThis family consists of the C terminal region of the DnaJ protein. It is always found associated with Pfam:PF00226 and Pfam:PF00684. DnaJ is a chaperone associated with the Hsp70 heat-shock system involved in protein folding and renaturation after ...This family consists of the C terminal region of the DnaJ protein. It is always found associated with Pfam:PF00226 and Pfam:PF00684. DnaJ is a chaperone associated with the Hsp70 heat-shock system involved in protein folding and renaturation after stress. The two C-terminal domains CTDI and CTDII, both incorporated in this family are necessary for maintaining the J-domains in their specific relative positions [2]. Structural analysis of PDB:1nlt shows that PF00684 is nested within this DnaJ C-terminal region [3].
Domain
U, V
PF02197Regulatory subunit of type II PKA R-subunit (RIIa)Regulatory subunit of type II PKA R-subunit- Domain
PF00160Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD (Pro_isomerase)Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLDThe peptidyl-prolyl cis-trans isomerases, also known as cyclophilins, share this domain of about 109 amino acids. Cyclophilins have been found in all organisms studied so far and catalyse peptidyl-prolyl isomerisation during which the peptide bond pr ...The peptidyl-prolyl cis-trans isomerases, also known as cyclophilins, share this domain of about 109 amino acids. Cyclophilins have been found in all organisms studied so far and catalyse peptidyl-prolyl isomerisation during which the peptide bond preceding proline (the peptidyl-prolyl bond) is stabilised in the cis conformation. Mammalian cyclophilin A (CypA) is a major cellular target for the immunosuppressive drug cyclosporin A (CsA). Other roles for cyclophilins may include chaperone and cell signalling function [1].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
Flagellar radial spoke protein 1- -
C, D
Flagellar radial spoke protein 2 -
E, F
Flagellar radial spoke protein 3-
G, H
Flagellar radial spoke protein 4-
I, J
Flagellar radial spoke protein 5 -
K, L
Flagellar radial spoke protein 6-
M, N
Flagellar radial spoke protein 7 -
S, T
Flagellar radial spoke protein 10- -
Flagellar radial spoke protein 14- -
LA [auth y],
MA [auth z],
Y,
Z
Flagellar radial spoke protein 16
AA [auth a],
BA [auth b],
CA [auth c],
DA [auth d]
Dynein 8 kDa light chain, flagellar outer arm-
EA [auth e]Unknown protein---
FA [auth i],
GA [auth j]
Flagellar radial spoke protein 23
IA [auth s]Uncharacterized protein- - -
JA [auth u],
KA [auth v]
Predicted protein- - -
U, V
Flagellar radial spoke protein 11- - -
Flagellar radial spoke protein 12 -
HA [auth k]Cytochrome b5 heme-binding domain-containing protein -
O, P, Q, R
Flagellar radial spoke protein 9-

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR003409MORN repeatRepeat
C, D
IPR007858Dpy-30 motifConserved Site
C, D
IPR037856Sdc1/DPY30Family
E, F
IPR009290Radial spoke 3Family
G, H
IPR006802Radial spokehead-like proteinFamily
I, J
IPR036812NADP-dependent oxidoreductase domain superfamilyHomologous Superfamily
I, J
IPR023210NADP-dependent oxidoreductase domainDomain
I, J
IPR050523Aldo/Keto Reductase Detoxification and BiosynthesisFamily
K, L
IPR006802Radial spokehead-like proteinFamily
M, N
IPR018247EF-Hand 1, calcium-binding siteBinding Site
M, N
IPR003117cAMP-dependent protein kinase regulatory subunit, dimerization-anchoring domainDomain
M, N
IPR002048EF-hand domainDomain
M, N
IPR052603EF-hand calcium-binding domain-containing protein 6Family
M, N
IPR011992EF-hand domain pairHomologous Superfamily
S, T
IPR003409MORN repeatRepeat
IPR011989Armadillo-like helicalHomologous Superfamily
IPR016024Armadillo-type foldHomologous Superfamily
IPR042856Radial spoke protein 14Family
IPR000225ArmadilloRepeat
LA [auth y],
MA [auth z],
Y,
Z
IPR001623DnaJ domainDomain
LA [auth y],
MA [auth z],
Y,
Z
IPR008971HSP40/DnaJ peptide-bindingHomologous Superfamily
LA [auth y],
MA [auth z],
Y,
Z
IPR002939Chaperone DnaJ, C-terminalDomain
LA [auth y],
MA [auth z],
Y,
Z
IPR036869Chaperone J-domain superfamilyHomologous Superfamily
LA [auth y],
MA [auth z],
Y,
Z
IPR051339DnaJ homolog subfamily BFamily
AA [auth a],
BA [auth b],
CA [auth c],
DA [auth d]
IPR037177Dynein light chain superfamilyHomologous Superfamily
AA [auth a],
BA [auth b],
CA [auth c],
DA [auth d]
IPR001372Dynein light chain, type 1/2Family
AA [auth a],
BA [auth b],
CA [auth c],
DA [auth d]
IPR019763Dynein light chain, type 1/2, conserved siteConserved Site
FA [auth i],
GA [auth j]
IPR034907Nucleoside diphosphate kinase-like domainDomain
FA [auth i],
GA [auth j]
IPR037994Nucleoside diphosphate kinase 6Family
FA [auth i],
GA [auth j]
IPR023005Nucleoside diphosphate kinase, active siteActive Site
FA [auth i],
GA [auth j]
IPR000048IQ motif, EF-hand binding siteBinding Site
FA [auth i],
GA [auth j]
IPR036850Nucleoside diphosphate kinase-like domain superfamilyHomologous Superfamily
FA [auth i],
GA [auth j]
IPR001564Nucleoside diphosphate kinaseFamily
IA [auth s]IPR037695IQ motif and ubiquitin-like domain-containing proteinFamily
U, V
IPR003117cAMP-dependent protein kinase regulatory subunit, dimerization-anchoring domainDomain
IPR029000Cyclophilin-like domain superfamilyHomologous Superfamily
IPR024936Cyclophilin-type peptidyl-prolyl cis-trans isomeraseFamily
IPR002130Cyclophilin-type peptidyl-prolyl cis-trans isomerase domainDomain
IPR044666Cyclophilin-type peptidyl-prolyl cis-trans isomerase, cyclophilin A-likeFamily
HA [auth k]IPR036400Cytochrome b5-like heme/steroid binding domain superfamilyHomologous Superfamily
HA [auth k]IPR001199Cytochrome b5-like heme/steroid binding domainDomain
HA [auth k]IPR052320Cytochrome b5 domain-containingFamily