Annotations: 7FDO

Crystal structure of transcription factor CPC in complex with EGL3

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	Peptidase_S29	e7fdoB1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Peptidase_S29	ECOD (v294.2)
A	Peptidase_S29	e7fdoA1	A: beta barrels	X: Nuclear receptor ligand-binding domain	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Peptidase_S29	ECOD (v294.2)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
B	PF00249	Myb-like DNA-binding domain (Myb_DNA-binding)	Myb-like DNA-binding domain	This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].	Domain
A	PF14215	bHLH-MYC and R2R3-MYB transcription factors N-terminal (bHLH-MYC_N)	bHLH-MYC and R2R3-MYB transcription factors N-terminal	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
B	Transcription factor CPC	DNA binding sequence-specific DNA binding sequence-specific double-stranded DNA binding transcription cis-regulatory region binding binding double-stranded DNA binding nucleic acid binding transcription regulatory region nucleic acid binding transcription regulator activity DNA-binding transcription factor activity	multicellular organismal process plant epidermal cell differentiation regulation of cellular process regulation of developmental process cellular developmental process positive regulation of biological process regulation of trichoblast fate specification plant epidermis development plant epidermal cell fate specification regulation of cell differentiation positive regulation of plant epidermal cell differentiation positive regulation of developmental process multicellular organism development regulation of plant epidermal cell differentiation trichoblast fate specification multicellular organismal process plant epidermal cell differentiation regulation of cellular process regulation of developmental process cellular developmental process positive regulation of biological process regulation of trichoblast fate specification plant epidermis development plant epidermal cell fate specification regulation of cell differentiation positive regulation of plant epidermal cell differentiation positive regulation of developmental process multicellular organism development regulation of plant epidermal cell differentiation trichoblast fate specification positive regulation of cell differentiation cell differentiation anatomical structure development regulation of root morphogenesis positive regulation of cell fate specification positive regulation of cell fate commitment positive regulation of cellular process regulation of anatomical structure morphogenesis root development trichoblast differentiation system development developmental process positive regulation of trichoblast fate specification regulation of biological process plant organ development root morphogenesis regulation of cell fate commitment root epidermal cell differentiation biological regulation cell fate specification tissue development plant organ morphogenesis anatomical structure morphogenesis regulation of cell fate specification cellular process cell fate commitment regulation of plant organ morphogenesis root system development RNA metabolic process regulation of primary metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process DNA-templated transcription regulation of RNA metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process regulation of biosynthetic process primary metabolic process regulation of macromolecule metabolic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process regulation of gene expression biosynthetic process metabolic process regulation of macromolecule biosynthetic process regulation of DNA-templated transcription macromolecule metabolic process regulation of metabolic process plant epidermis morphogenesis stomatal complex morphogenesis shoot system morphogenesis stomatal complex formation post-embryonic plant morphogenesis stomatal complex development anatomical structure formation involved in morphogenesis post-embryonic development shoot system development	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure organelle nucleus intracellular membrane-bounded organelle
A	Transcription factor EGL1	DNA binding binding nucleic acid binding transcription regulator activity DNA-binding transcription factor activity protein binding protein dimerization activity	cellular response to stimulus regulation of cellular process response to lipid response to stimulus signaling hormone-mediated signaling pathway cell communication cellular response to endogenous stimulus cellular response to jasmonic acid stimulus response to hormone signal transduction cellular response to hormone stimulus regulation of biological process response to jasmonic acid cellular response to stimulus regulation of cellular process response to lipid response to stimulus signaling hormone-mediated signaling pathway cell communication cellular response to endogenous stimulus cellular response to jasmonic acid stimulus response to hormone signal transduction cellular response to hormone stimulus regulation of biological process response to jasmonic acid response to fatty acid response to endogenous stimulus biological regulation response to oxygen-containing compound jasmonic acid mediated signaling pathway cellular response to oxygen-containing compound cellular response to fatty acid cellular response to chemical stimulus response to chemical cellular response to lipid cellular process developmental process plant epidermal cell differentiation cellular developmental process cell differentiation plant epidermal cell fate specification cell fate specification cell fate commitment RNA metabolic process regulation of primary metabolic process nucleobase-containing compound metabolic process RNA biosynthetic process nucleic acid biosynthetic process DNA-templated transcription regulation of RNA metabolic process regulation of nucleobase-containing compound metabolic process regulation of RNA biosynthetic process regulation of biosynthetic process primary metabolic process regulation of macromolecule metabolic process nucleobase-containing compound biosynthetic process gene expression macromolecule biosynthetic process nucleic acid metabolic process regulation of gene expression biosynthetic process metabolic process regulation of macromolecule biosynthetic process regulation of DNA-templated transcription macromolecule metabolic process regulation of metabolic process trichome differentiation plant epidermis development anatomical structure development tissue development	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure organelle nucleus intracellular membrane-bounded organelle

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
B	IPR009057	Homedomain-like superfamily	Homologous Superfamily
B	IPR015495	Myb transcription factor, plants	Family
B	IPR001005	SANT/Myb domain	Domain
B	IPR017930	Myb domain	Domain
A	IPR054502	Plant bHLH transcription factor, ACT-like domain	Domain
A	IPR025610	Transcription factor MYC/MYB N-terminal	Domain
A	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	Domain
A	IPR036638	Helix-loop-helix DNA-binding domain superfamily	Homologous Superfamily

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

7FDO | pdb_00007fdo

Crystal structure of transcription factor CPC in complex with EGL3

External Resource: Annotation

Domain Annotation: ECOD Classification ECOD Database Homepage

Protein Family Annotation Pfam Database Homepage

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage