7EGK
Bicarbonate transporter complex SbtA-SbtB bound to AMP
External Resource: Annotation
- Domain Annotation: SCOP/SCOPe Classification
- Domain Annotation: SCOP2 Classification
- Domain Annotation: ECOD Classification
- Protein Family Annotation
- Gene Ontology: Gene Product Annotation
- InterPro: Protein Family Classification
- Membrane Protein Annotation: OPM
- Membrane Protein Annotation: PDBTM
- Membrane Protein Annotation: MemProtMD
- Membrane Protein Annotation: mpstruc
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B [auth D] | d7egkd_ | Alpha and beta proteins (a+b) | Ferredoxin-like | GlnB-like | automated matches | automated matches | (Synechocystis sp. PCC 6803 substr. Kazusa ) [TaxId: 1111708 ], | SCOPe (2.08) |
D [auth F] | d7egkf_ | Alpha and beta proteins (a+b) | Ferredoxin-like | GlnB-like | automated matches | automated matches | (Synechocystis sp. PCC 6803 substr. Kazusa ) [TaxId: 1111708 ], | SCOPe (2.08) |
F [auth B] | d7egkb_ | Alpha and beta proteins (a+b) | Ferredoxin-like | GlnB-like | automated matches | automated matches | (Synechocystis sp. PCC 6803 substr. Kazusa ) [TaxId: 1111708 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
B [auth D] | SCOP2B Superfamily | GlnB-like | 8086166 | 3001165 | SCOP2B (2021-05-27) |
D [auth F] | SCOP2B Superfamily | GlnB-like | 8086166 | 3001165 | SCOP2B (2021-05-27) |
F [auth B] | SCOP2B Superfamily | GlnB-like | 8086166 | 3001165 | SCOP2B (2021-05-27) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF05982 | e7egkA1 | A: alpha complex topology | X: Cation-proton antiporter | H: Cation-proton antiporter (CPA) (From Topology) | T: Cation-proton antiporter (CPA) | F: PF05982 | ECOD (1.6) |
C | PF05982 | e7egkC1 | A: alpha complex topology | X: Cation-proton antiporter | H: Cation-proton antiporter (CPA) (From Topology) | T: Cation-proton antiporter (CPA) | F: PF05982 | ECOD (1.6) |
E | PF05982 | e7egkE1 | A: alpha complex topology | X: Cation-proton antiporter | H: Cation-proton antiporter (CPA) (From Topology) | T: Cation-proton antiporter (CPA) | F: PF05982 | ECOD (1.6) |
B [auth D] | PF00543 | e7egkD1 | A: a+b two layers | X: Alpha-beta plaits | H: GlnB-like (From Topology) | T: GlnB-like | F: PF00543 | ECOD (1.6) |
D [auth F] | PF00543 | e7egkF1 | A: a+b two layers | X: Alpha-beta plaits | H: GlnB-like (From Topology) | T: GlnB-like | F: PF00543 | ECOD (1.6) |
F [auth B] | PF00543 | e7egkB1 | A: a+b two layers | X: Alpha-beta plaits | H: GlnB-like (From Topology) | T: GlnB-like | F: PF00543 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF05982 | Na+-dependent bicarbonate transporter superfamily (Sbt_1) | Na+-dependent bicarbonate transporter superfamily | - | Family | |
B [auth D], D [auth F], F [auth B] | PF00543 | Nitrogen regulatory protein P-II (P-II) | Nitrogen regulatory protein P-II | P-II modulates the activity of glutamine synthetase. It is a tetrameric protein encoded by the glnB gene, a component of the adenylation cascade involved in the regulation of GS activity [1,2]. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR010293 | Na+-dependent bicarbonate transporter superfamily | Family | |
B [auth D], D [auth F], F [auth B] | IPR015867 | Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal | Homologous Superfamily |
B [auth D], D [auth F], F [auth B] | IPR011322 | Nitrogen regulatory PII-like, alpha/beta | Homologous Superfamily |
Membrane Protein Annotation: OPM OPM Database Homepage
Chains | External Link | Type | Class | Superfamily | Family |
---|---|---|---|---|---|
OPM | Transmembrane | Alpha-helical polytopic | Monovalent cation-proton antiporter | Na+-dependent bicarbonate transporter |
Membrane Protein Annotation: PDBTM PDBTM Database Homepage
Chains | External Link | Comment |
---|---|---|
PDBTM | Annotated as membrane protein by PDBTM |
Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage
Chains | External Link | Comment |
---|---|---|
MemProtMD | Annotated as membrane protein by MemProtMD |
Membrane Protein Annotation: mpstruc mpstruc Database Homepage
Chains | Resource Link | Group | Subgroup | Protein |
---|---|---|---|---|
mpstruc | TRANSMEMBRANE PROTEINS: ALPHA-HELICAL | Solute Sodium Symporter (SSS) Family | SbtA-SbtB Na+ dependent bicarbonate transporter complex bound to HCO3- |