7E21
Cryo EM structure of a Na+-bound Na+,K+-ATPase in the E1 state with ATP-gamma-S
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF00122 | e7e21A2 | A: beta sandwiches | X: jelly-roll | H: Calcium ATPase, transduction domain A (From Topology) | T: Calcium ATPase, transduction domain A | F: PF00122 | ECOD (1.6) |
A | PF00122,PF00689,PF00690 | e7e21A1 | A: alpha bundles | X: Calcium ATPase transmembrane domain-related (From Homology) | H: Calcium ATPase transmembrane domain-related | T: Calcium ATPase transmembrane domain M | F: PF00122,PF00689,PF00690 | ECOD (1.6) |
A | PF13246 | e7e21A4 | A: a+b complex topology | X: Metal cation-transporting ATPase, ATP-binding domain (From Topology) | H: Metal cation-transporting ATPase, ATP-binding domain (From Topology) | T: Metal cation-transporting ATPase, ATP-binding domain | F: PF13246 | ECOD (1.6) |
A | PF00702 | e7e21A3 | A: a/b three-layered sandwiches | X: HAD domain-like | H: HAD domain-related | T: HAD-like | F: PF00702 | ECOD (1.6) |
B | PF00287 | e7e21B2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF00287 | ECOD (1.6) |
B | PF00287 | e7e21B1 | A: extended segments | X: Transmembrane helix in sodium-potassium ATPase beta subunit (From Topology) | H: Transmembrane helix in sodium-potassium ATPase beta subunit (From Topology) | T: Transmembrane helix in sodium-potassium ATPase beta subunit | F: PF00287 | ECOD (1.6) |
C | PF02038 | e7e21C1 | A: extended segments | X: FXYD family (From Topology) | H: FXYD family (From Topology) | T: FXYD family | F: PF02038 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00689 | Cation transporting ATPase, C-terminus (Cation_ATPase_C) | Cation transporting ATPase, C-terminus | - | Family | |
PF00690 | Cation transporter/ATPase, N-terminus (Cation_ATPase_N) | Cation transporter/ATPase, N-terminus | Members of this families are involved in Na+/K+, H+/K+, Ca++ and Mg++ transport. | Domain | |
PF00122 | E1-E2 ATPase (E1-E2_ATPase) | E1-E2 ATPase | - | Family | |
PF13246 | Cation transport ATPase (P-type) (Cation_ATPase) | Cation transport ATPase (P-type) | - | Family | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Pharos: Disease Associations Pharos Homepage Annotation
Membrane Protein Annotation: OPM OPM Database Homepage
Chains | External Link | Type | Class | Superfamily | Family |
---|---|---|---|---|---|
OPM | Transmembrane | Alpha-helical polytopic | P-type ATPase (P-ATPase) | P-ATPase |
Membrane Protein Annotation: PDBTM PDBTM Database Homepage
Chains | External Link | Comment |
---|---|---|
PDBTM | Annotated as membrane protein by PDBTM |
Membrane Protein Annotation: mpstruc mpstruc Database Homepage
Chains | Resource Link | Group | Subgroup | Protein |
---|---|---|---|---|
mpstruc | TRANSMEMBRANE PROTEINS: ALPHA-HELICAL | P-type ATPase | Na,K-ATPase, Na+-bound, E1 state |