7E1X
Cryo-EM structure of hybrid respiratory supercomplex consisting of Mycobacterium tuberculosis complexIII and Mycobacterium smegmatis complexIV in presence of TB47
External Resource: Annotation
- Domain Annotation: SCOP2 Classification
- Domain Annotation: ECOD Classification
- Protein Family Annotation
- Gene Ontology: Gene Product Annotation
- InterPro: Protein Family Classification
- Membrane Protein Annotation: OPM
- Membrane Protein Annotation: PDBTM
- Membrane Protein Annotation: MemProtMD
- Membrane Protein Annotation: mpstruc
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
J [auth S] | SCOP2B Superfamily | Cytochrome c oxidase subunit III-like | 8075786 | 3000671 | SCOP2B (2021-05-27) |
C [auth G] | SCOP2B Superfamily | Cytochrome c oxidase subunit III-like | 8075786 | 3000671 | SCOP2B (2021-05-27) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth E] | PF00116 | e7e1xE1 | A: beta sandwiches | X: Cupredoxin-like | H: Cupredoxin-related (From Topology) | T: Cupredoxin-related | F: PF00116 | ECOD (1.6) |
A [auth E] | F_UNCLASSIFIED | e7e1xE2 | A: extended segments | X: Cytochrome c oxidase subunit II-like, transmembrane region (From Topology) | H: Cytochrome c oxidase subunit II-like, transmembrane region (From Topology) | T: Cytochrome c oxidase subunit II-like, transmembrane region | F: F_UNCLASSIFIED | ECOD (1.6) |
H [auth Q] | PF00116 | e7e1xQ1 | A: beta sandwiches | X: Cupredoxin-like | H: Cupredoxin-related (From Topology) | T: Cupredoxin-related | F: PF00116 | ECOD (1.6) |
H [auth Q] | F_UNCLASSIFIED | e7e1xQ2 | A: extended segments | X: Cytochrome c oxidase subunit II-like, transmembrane region (From Topology) | H: Cytochrome c oxidase subunit II-like, transmembrane region (From Topology) | T: Cytochrome c oxidase subunit II-like, transmembrane region | F: F_UNCLASSIFIED | ECOD (1.6) |
B [auth F] | PF00115 | e7e1xF1 | A: alpha superhelices | X: Cytochrome c oxidase subunit I-like | H: Cytochrome c oxidase subunit I-like (From Topology) | T: Cytochrome c oxidase subunit I-like | F: PF00115 | ECOD (1.6) |
I [auth R] | PF00115 | e7e1xR1 | A: alpha superhelices | X: Cytochrome c oxidase subunit I-like | H: Cytochrome c oxidase subunit I-like (From Topology) | T: Cytochrome c oxidase subunit I-like | F: PF00115 | ECOD (1.6) |
J [auth S] | PF00510 | e7e1xS1 | A: alpha bundles | X: Cytochrome c oxidase subunit III-like (From Topology) | H: Cytochrome c oxidase subunit III-like (From Topology) | T: Cytochrome c oxidase subunit III-like | F: PF00510 | ECOD (1.6) |
C [auth G] | PF00510 | e7e1xG1 | A: alpha bundles | X: Cytochrome c oxidase subunit III-like (From Topology) | H: Cytochrome c oxidase subunit III-like (From Topology) | T: Cytochrome c oxidase subunit III-like | F: PF00510 | ECOD (1.6) |
F [auth J] | PF17174 | e7e1xJ1 | A: a+b three layers | X: thylakoid acid phosphatase domain-related (From Topology) | H: thylakoid acid phosphatase domain-related (From Topology) | T: thylakoid acid phosphatase domain-related | F: PF17174 | ECOD (1.6) |
M [auth V] | PF17174 | e7e1xV1 | A: a+b three layers | X: thylakoid acid phosphatase domain-related (From Topology) | H: thylakoid acid phosphatase domain-related (From Topology) | T: thylakoid acid phosphatase domain-related | F: PF17174 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
Q [auth O], T [auth C] | PF13442 | Cytochrome C oxidase, cbb3-type, subunit III (Cytochrome_CBB3) | Cytochrome C oxidase, cbb3-type, subunit III | - | Domain |
Q [auth O], T [auth C] | PF00034 | Cytochrome c (Cytochrom_C) | Cytochrome c | The Pfam entry does not include all Prosite members. The cytochrome 556 and cytochrome c' families are not included. All these are now in a new clan together. The C-terminus of DUF989, Pfam:PF06181, has now been merged into this family. | Domain |
D [auth H], K [auth T] | PF12270 | Cytochrome c oxidase subunit IV (Cyt_c_ox_IV) | Cytochrome c oxidase subunit IV | - | Family |
F [auth J], M [auth V] | PF17174 | Domain of unknown function (DUF5130) (DUF5130) | Domain of unknown function (DUF5130) | - | Family |
O [auth N], R [auth B] | PF13631 | Cytochrome b(N-terminal)/b6/petB (Cytochrom_B_N_2) | Cytochrome b(N-terminal)/b6/petB | - | Domain |
P [auth M], S [auth A] | PF00355 | Rieske [2Fe-2S] domain (Rieske) | Rieske [2Fe-2S] domain | The rieske domain has a [2Fe-2S] centre. Two conserved cysteines coordinate one Fe ion, while the other Fe ion is coordinated by two conserved histidines. In hyperthermophilic archaea there is a SKTPCX(2-3)C motif at the C-terminus. The cysteines in ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Membrane Protein Annotation: OPM OPM Database Homepage
Chains | External Link | Type | Class | Superfamily | Family |
---|---|---|---|---|---|
OPM | Transmembrane | Alpha-helical polytopic | Electron transport chain complex IV (cytochrome c oxidase) | Respiratory supercomplexes III-IV |
Membrane Protein Annotation: PDBTM PDBTM Database Homepage
Chains | External Link | Comment |
---|---|---|
PDBTM | Annotated as membrane protein by PDBTM |
Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage
Chains | External Link | Comment |
---|---|---|
MemProtMD | Annotated as membrane protein by MemProtMD |